morexGenes - Barley RNA-seq Database

Contig contig_167880

Source Contig contig_167880

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_167880 (1255 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_167880

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_25228	1	107 bp	None	Available	Available	None
MLOC_25229	1	170 bp	MLOC_25229.1	Available	Available	None

CDS Structure of MLOC_25228

CDS Structure of MLOC_25229

Contig Sequence (1255 bp)

>contig_167880 1255 assembly3_WGSMorex_rbca.fasta
ATACGTTTGAGACGTATCAGGTAGCAGGCGCAAGTAGACTAATTCAGGTTCAGGTCAATG
TCTGAAAAGTGACGACGGGTTATGAATTCAGAAAATTGCTGGGTCCTCCTATCCGCCCGT
CCGTTGCACAAGCTGCCCTGTTGCTTGATACAGTTGTGTCGGCTGGGAACGAGAAGTAGA
TTCCATGGCGCACCTCGGATTATTACACTAGACACTATGCTGCTGGCGCGTTGCACACGA
ACTTCGATCAGTTGTCCGACCGAAAGTGCTGAGATCAATTATACAATTCCCCAAAGAAGT
GCTACAGAATCTTGTATTCTTTCCTAAAACTCGAGTTCATCTGAATTTTGGCAACTAGTA
TAACGCGAAATTGGTTGTTAAGTTTGTTTGGCATGTGTGGCGCTGACTGCTACTGACAGA
CTAATCATGGCGATGGTGTTGGATGCGATCGAGAAATTGGTATGGGCAGGAGAGACGAGA
GAGGCATGGAGGAGCTGAGGGGCAGGGGAGAGGGGGACTGACCGCTTCGATGTCGATCCT
GTAGACGACGTGGAGCTGACGATTCTCCCGGCTGCTCGCCCGGTACGCCATGGCGAGGTG
CGCGGCAGCGAGCGCGAGCGACATGAGGAACATGGGCTCAACGGCGAGGGCCTGGCCCTT
GCAGTGCAGGTCGAGGTCGGCGGAGCCGTCGGCGGCGACGCCGAAGACCGTGGCGGCCTT
GGCGAGGACGTAGAAGAGGGAGCCGGCGCTGCACGTCGCCGCCACCCACACGTACGCCGC
GCCTCCCTCGCACGCCGTGTACGCGCCTACACACACACACAGGAAAAACCAGCCAGACGA
TTAGCAAACTAGCAGGAACAAAATCTGAGGTCCTTTTCGGGAGCCGACAACGGACGACGA
ACAAGCGGAGGAAGGGCGTGACGAGCGGAGGATGGGTGAGATAGTGGGTAGGAGGTGGCG
GCTGCGATCTGGAAGGGAGGAGGAGGGGTGTTCGATCTGGATGGGCTAGGGTTCGCTGCG
CTGGGGAGAGAGAGGAGCTACGTGGGTGAGAGGGTGAGGGGGTGTGGGCCGTTGGATCTG
TACGACTTGGACGGCTCAGATCATTTTCAATAGGGTGATCCGTGGACTCTATTCTGATTG
GTCGAGACATGTGTCATTTAAAATAATCTCTAAGTGCTAAAAACAATGGAGATTTATGAA
AAAACTACCAATAATATTTTACAAAATGTCACCACTAAAATTTTCACTCAAGTTA