| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
No map location |  |
Predicted Genes from contig_167840
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_25218 |
2 |
1896 bp |
MLOC_25218.1 |
Available |
Available |
LOC_Os12g22030.1, FRAME:+3, EVALUE:0.0, 13112.m02237 protein serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed |
CDS Structure of MLOC_25218
Contig Sequence (8724 bp)
>contig_167840 8724 assembly3_WGSMorex_rbca.fasta
CTGGCGCCACTAGAAGGTCTTTTGTGCAGTAGCATAACAGACATCAGACGCATTTCTGGC
GCCGTTGCCGGGGATACACATCAAACATCATTCACCCGTCCAGGGAGTAACCCGACTCGG
CCATCATTTGGGCAGGAGGCCCTTAGACACAAAGGCCGAGGAGGCCGGTTCATGGCCCAT
CGTCTGGCGGGCCAACTCGAGAAGGAAGATGTGGAGATCCTCCCTCACGTAAGATAGTAA
GAAGTGAAATAAGTCACGGGTTGTAATACGACTCGGACTTTGTTGTAATCTCAAGGTCCC
AACCTATATATAAATAGGAGCCCCTCAGGTAGAGAGGACAAGTTAGAAACCCTCGAGAGC
TAGGTTAGCGATTGTGCATCCTTGTAGTCGAGGTCATCATCAATAACACCAAAAGCAATA
CGTAGGCGTTTACCTCCATCAGAGGGGCCAGACCTGGGTAAACCCGCCTCTCTCGATTTC
GATCAACCCCGTTCAAGCCGCCATCTAGTTGCGCTGGTCTCACACCTAAGTCCTTTCACG
AGGACATGTGTCATGACAAAACCACAACAACTCCTATTCGTCTCCTACCTTTTTACGTCA
CGTTTGTATGAACCCCGACCGGGATGGCCCCGTCGCCTTCATGCTTGATTTTACGGATGG
AGAGAGTTCGTCTCCCCTATGAAAGTTTCTGAGGCATAACCCTAATCTTCCTCCCCTGAT
TCCCCTCCTTACCCCTCGCATGTGCCGCCAGGTAAAGCCACCATAGCCGACACTCTTATT
ACGCTTCATGAGCTACGTCGTCGACACAGGTCACTAGGTCCACGATCACCGGCGACCCCA
GGACGTGTGGCCATGTCCTTCTTCTTCTCCGTCGTCGACTACGTCCATCCCTGAGGCTGC
AATGTCTAGGTTGCCTCGACTACCTCGCCATCGTCCTCTACGCCTCAAGCTCGGGTTCAC
CGTCAATTCACTGTTATCCATTGCCGCTACCGAAGCCTCTACTGCTTTCCCAACCACCCC
GGGCCCGGATTCGAGCCCCTCGTGAGACGCTCTTCGAAATCCATTTGTTTCCCTCTTGAA
TCCATGCATGTAGGCATCACTCCGGTCAAAAATGTTCACGATTGCTCCTTTTCTTCCATG
CACACACCCGAGGCGTGCTCCTGTATCAAGTTCCACACACGCGTCCAGGTCTAGATGATT
GAACCACCAAACTTTTTGTAGTCATCCTCCATGTGTAAACTCTCACCTTGGGGAGGGGGG
CATTATTTTTTCACATCCGGCTCCACAAAGTTCTAACTCATTACGAGCAACACTGGATTG
ACCCAAGTCACTCAAAGACTTATACTGACCTAGAGCAAATTTATACATGGTCCTAATAAA
AAAAACTCCATTTCTCTCATAATATTGAGCACTAATATGCCCTGTGTGAGGAGCAAGCAA
ACCTAACATAGCCTCAACATCATGGGGTATAATATATGTCTAATCAACCCATAGTCCCGC
CTATTAATACTACGGATCATGAAGTTAGAAAACCATTTGAGTCTTTCATTCCTCTTCCCA
AAGATTCTCAAACTCATCGTTCCAGGATTCCAATTATCTTATTAAATGTTGTCATCCTTT
GCATCGCACACTTGTCATATGATTCCTTTTTCAACAATTCCAACCCGCGGACAATACGTT
GCCACGGTGCGGGCGAACAAAGTGAAAAAACAGTGTCCAAAAGTTGCCATTGGGAACCCA
AAAAAATCAAGATAAGTATATACAATGCTTTTAAATTTTTCAACCTAAATACAAAACACA
AATAGAGAGAAACAAGAAAGAAAAAATAAAACACAAATAGAGAGAAACAAGAAAGAAAAA
ACCAAATATAAATAGCACTGCCATTTTTTTCTTTTGTCTATTTGTGATATAAATTCAGGT
TAGAATTGTCTTTTTATCTCTTTGTGCAGAAAGTTTAAGCACAAACCCTTGCAAACCCAC
GCCTTTTTTTCGGGGTGGAAGCAAACCCACGCGCATATAAAGCGGCGGCGGCGGCGGCGG
ACTAGCCCTACCCGATCCGAACCATCCCGAGATTTTCCCCGGGCCGCAGCCGCATTTCGT
CGAGCACTGGACGCGCATGGCCATGACCGCGCCCCACGTCTCGCACTCGCAGCCACCCGT
AGGGCGCGCCGCTTTATTCTCTCACCCCACCACCGCGCAGAGCCCCTCCCCTCTCCGCCT
CCCTCTCCGCCGCGCCGCCGTCCGCCTCTACGCCGTCTCCACCGATGCCGCCTCTGCCAC
CGCCGCCGCGGCGATGGACGCCGTGGCCGACTGGGGGCTCACCCCGCTCGCGGAGGCCGA
CCCGGAGGTGTACGACCTCATCGAGCGCGAGAAGCGGCGCCAGCGCACGGGCATCGAGCT
AATCGCGTCCGAGAACTTCACCTCGCTCGCCGTCATGCAGGCGCTCGGCTCCCCGCTCAC
CAACAAGTACTCCGAGGGCATGCCTGGGGCGCGCTACTACGGCGGGAACGAGGTCATCGA
CGAGGTCGAGGAGCTCTGCCGCGCCCGCGCCCTCAAGGCGTTCCACCTCGACCCCGCCTC
CTGGGGCGTCAACGTGCAGCCCTACTCCGGCTCCCCCGCCAACTTCGCCGCCTACACTGG
GCTGCTCCAACCCCACGAGCGAATCATGGGGCTCGATTTGCCGTCCGGAGGACACCTCAC
TCATGGGTACTACACGGCCGGGGGCAAGAAGATTTCTGCCACCTCTATCTACTTTTCGAG
CTTGCCCTACAAGGTGAGCTCCGACACCGGGTACGTCGACTATGATAGGCTGGAGGAGAA
GGCCATGGATTTCCGCCCCAAGCTCATTATCTGTGGCGGGAGCGCGTACCCACGGGACTG
GGATTATGCCAGGCTTAGGGCCATCGCGGACAAGTGTGGGGCCATGTTGCTGTGTGACAT
GGCCCATATCAGCGGTCTCGTTGCTGCTCAGGTATCGACTTTTCTGTGTTTCTGTGCCAT
TAGATGATTAGGTTATGTATTGTATCTGTTGCAAGTGTAATACTAGTTTATTGATTAAAA
CAGGTTTTAGTATGACATCGATTTAAATGTAAGTTCTCGTTATTTATTAGAATTGAGATC
AAGCCTGATCAATTGTTGCAACAATGGATGCTTCCCCCTTGTATAATCATGTTCATGGAG
AGGCCTATCACTGAAAATAACATTGACCTTCCATAAAATTGTTTCGCTAAGTTTGTTTAC
AGCCTCCCATAGTACTGAAATGCAGTATCTTTTTTAGTCTGCTGTGATAGTAGTCATCAT
CAACATACAGAGAGGTAGTCGATTTCTGCACTCTCTAACAAGAGATGTTGTTTGCTGTCA
TTCTCTTGGTGTTTAAGACAACATGAAATTCACTGGGTTTTGGCAGGAACTTTACTGTAA
ACTAAGCAATTTGCAAAGGCTTCCTGTGGAACTCCCATATTCCAAACCCCCGTTTAATTA
TTTTTTCACCTCATTGGTAATATTTTGATTTGTTCTCTTACAGGAGGCTACGAATCCGTT
TGAGTACTCTGATGTGGTTACCACCACCACCCACAAGAGTCTCCGAGGGCCAAGGTCTGG
TATGATATTCTACAGGAAGGGCCCGAAGCCTCCCAAAAAAGGCCAGCCCGAGGGTGCTCT
GTACGATTATGAGGACAAGATCAACTTTGCAGTGTTTCCATCACTTCAGGGCGGCCCTCA
CAACCACCAGATTGCTGCCCTGGCAGTTGGCCTGAAGCAGGCCATGTTACCTGGATTCAA
GGCATATATTCAGCAGGTCAAGGTCAATGCTGTTGCCCTTGGAAACCATCTCATGAGTAA
GGGCTACAAGTTGGTTACTGATGGAACAGAGAACCACCTTGTTCTCTGGGATCTTCGCCC
TCTTGGCTTGTCTGGTATGCAGAGAAATTTTAGTTGGCATCTCTTTATATGGTTGTATTC
AGTGCTAACTTGCTCTAAAATTGGTTTGCTAAATTTGTAGGTAACAAAGTTGAGAAAGTA
TGTGATCTGAGCAGCATTACACTCAACAAAAATGCTGTCTTTGGTGACAGCAGTGCATTG
GCACCTGGTGGTGTCCGAATTGGTCAGTGTCTCTTCCTAAATACTGTTTTGTTACTCTTT
CTGTCCCCACGTGCTTTGGAGGTTGTTAATGGTTACTGGCAATAAAATCGGTCAGAAGGC
ACTCAAATCAATCATTACTATTGTCATTCGCACCGGTCTCTGAGAGCATGTGAAGTATGA
GGTGGCCAATTTTTTTTCTTGTGGAATATTATTGCTTCTGCCCATGTATAAGGATATTCC
TGTTTCATCTAAGAAGCAAATTGACTCCCGTTGCTAGTCCAAACTCAAAATTTTAATTTT
TCCAAGGGCCATTCTTTGAGTCTGCATCATTATTCGTCCAGCACTTCGCAAGATCAGAAA
ATTATCCAGCTCACTAGATGCACTATTGTCAATCTCCTAAAGTTCAACATCTTGTAAATT
TATGAACTGGAATCTGTTATGACTTTTATTCCTTTCTTTTGGTTCTTTTTTGCTTTGTTG
GTTTTTAAAGGCAACAAAGTTACATTGCTTGTGTTCAAGTTCTTAACCTTGCACTTGGAA
GGTTCATGTCATCATTCTCTAATATTTGTCCTGAAAAGGCTTCCATTTTATTTGTGGTTG
TGCAAGAATACAACACCATGTTTTAAGACCTACGGTGTAATTACAGTGGAATGTATATGT
CATCACTCCCTAATACTCCTACTTGTCTTGGAAAGGCTTTTAAGCTTTGTTTTGTGATTG
TGGAAGATTACAACAACACACGAACTACTATGTCTTGCAGCATAACATACTTAAGCTGCC
GGTTGCTTGATCTACACTACTGACATTTTTAATCATTTGCTTGCTTTAGAGTTTCTCTTC
CATGTTGTAACCTTCATAAATTTGTTCGTTTTAGACATGCATCATTATTCTATCTGTCTT
GAGAAATCAAAGAAAAAGAAACATGCTGCATGGATGAACTGACTATCCAGCTTTTTCTAT
GAGAAAACTGGATACTCGGTACTTCTGTGCACGGGTAAATTTCTGGAACGTTAATGATAC
AATAGCATACCAGCTAAGTTCATTATATCTAAATGTCCATTCTAGGTACACCTGCCATGA
CCTCGAGAGGTTTGGTCGAGAAGGACTTCGTGAAGATTGCTGAGTACCTTCATCAGGCTG
TGGTCATCTGCTTGAATGTCCAGAAGCAGCGAGGCAAGCGTTACAATGATTTCATTGTTG
ACTTGGAGAAGAACGAGGACATAGCGGAGCTCAGGGCAGAGGTCGAGAAGTTTGCCATTT
CATTTGAGATGCCTGGCTTCCTGGTGTCAGACATGAAATACAAGGATTAGGCAATCGTTT
TCTTGTAGCAGAAAATTGGTGCCTTAAGGGGCTGATTGCTGTGCGCTAATCGTGATGTAT
GGATTATGGTTGAGAATGATATGACTCATGAATAATCGTTGAAGGTATGCGATGACATGG
TGATGGTTTTCCTAGCCTCGGTTTTCTAAGCGATTTGTGTGACCTCGTTGGCAGTTTGTT
TATGTGGTTTTTGATGTTTAAGGATTTTTAGTGTCAGTGAGGCCCCATTGCAGGAGCCTT
TGCTGGGTGCCCCACTTATTATACGCCGGAGGGTACACAGTATTAAGACGTGGTATTCCT
TTACCAAAACTTCCAAGTACTGCAGTACATCTATTTATCGTTTGTGTTTTTATCATCGTG
TTTCTCGTAGTGAGATCTTCAATGGTATGCTTGGTGAATTTTCTGAACTTCTTTTGTCTT
ATCGCTATCGCTGTACTTACACGGCCCATGTGTCATGTAGATATAAGGAAGTATCATTTT
AGGAAACGTTTACTACATAACCCATGTGTCTTCTAGATATAAGTATTATTTTAGGAAACA
TTTACAGCGGTGCACTAGCGTTCACTGGCGAAACGCTCGGGTGGATCGCGTGCGATCCGG
TGGCCCTGCGCCCCTGCTGCTGCGGCCCCTACGGACCACCGTCCGCATCGCTGCTGCCTG
CCCCGTCGATCGTCCGCATCGTCGGTGCCTGTCCCCGTTGTTCGCTGGTTTCAGCCGTTG
TCTATCGTCCTCGTCGGATGCTGCCATGGCGGACTTGCGCGTATGCAAATGTTGTAACCG
TCATCTAATTTTTTTTAAACGTTGTTGAAAAAAGCTTCAACCATATATAGAGAAAGTTTC
AATCGGCTCTTCCAGCAAGGAAAGCTACAACCGTAGTTGCATTTTGCTACTATCGTTTAA
CTTTTTTGCTACATCCATCATGATGCACCCGTGACCTAGCGATGAATTTTTGCTGCAACT
GTAGTTGCATTTTGCTAGTACCGACGAACTTTTTTGCTACATCCATCAAAGGCGGCGTCG
CGACCTCGCGCGACGACGACGATGATTTTGCTGCAACCATGTTTTTGCTACATCCGTGGC
TGAAATTTGCTACATCGCTGCTCTGTTTTTGCTACCATCAACAATTTTTGCTGCATGACT
CGATCTGACGGTCAACAGGGTTCGATCTGACGGCTCACGTGCGATCGGCCGGCGCGCCCG
CGCACATCAGTGCCCACTTTCATGGCCCATGTGTCTTGTAGATATAAGAGCATAGTTAAT
AGTGTAGACAACTCCTCGCTATAAGCCATCTTATATCCAATCTTATAGCTAGCTTGTACA
ATAGNNNNNNNNNNNNNNNNACTACTTTTATCATATATGGTCCACCTTTCATTCTCACAA
ATCACCTAGGAGTACGTGCTAGAGCTAGCTCTTCACGAAGAGTCCGCTTTCCTTCTCTCT
CCTCTTCTTTTTCATCTAACTCAACAAAAATATACTCCCTCCGTTCCTAANNNNAAGTCT
TTTAAGATATTTCACTAAATGACTACATATAGAGCAAAATGAGTTAATCTATACTCNNNN
NNATGTCTATATACATCCGTATATAGGTTCCCTACTAAAAACTCTAAAAAGACTTATATT
TAGGAACGGAGGGAGTAGTATTTTAATTCTTACAACCTGCTGACGATACTTATTGTACAT
GCTCTAAGTATTACTTTTGGGAGTTACACTCCTTGCTCTAGTGTTTTTAATGTCGTGCGT
GTACCAGGTGTATTGTCCCAGTTGTTTTTGGAGTGTACCATTTACACTGTATTTGATGTT
GTATTGCCTAATTTGTTCTCTTTGTGGCTCACATGTATAGTTTTTGTAATTGCATTTTTT
TGGACACTAAGTTTTTCCTTCCTTGGCATGGCTATAACTGAATATTAAGATACAAAAAGA
AGGAATTCAGTCCATTTATTTCGTTATCCTGCCTTACTCGAATTACACCAAGTGATTTTG
AAATGGTGAAGTCTTTATGGCTCCTTCTCTAAGGTGATTATTAGAACTACTTTATTGATT
TAAGATTTAAAATGTCTTATATTAGTTTACGGAGGGAGTACTAGTTATTGTTTCGTTGAA
TTTGCTTCGTTATTAGGCTCGCCATTTGACTTTGATAGTTACTAGAAGAAAAAAGACGCG
CTTTGTGCGCCAGAATATTTGTTTGATCATTGTAAAATCAGTTTTTCTGCTCTTATTTGT
GTGTCACTCATGAGCCGAGCAACTTCATGAAACACATAAAACATGGGAAGAACAAGCTCT
TCGTCGTGATGACAAATCGTAATAGTTGTCTTCATGATATTATCAAACATTCGGCCTAAC
AAACAGACGCTCATCACACCACATAGAATCAAACGAGTTTCCCTAGAATGATTGTTGTGA
AAGATAAACAATAGTTAATATGCATTTCAACCATCCCAAGCATTTAGAAGCAAAACAATA
CACACTGTGTTTCCCTAGAATGATTGTTGTCCTCCATGAACTGAACAAAATATGCAATTT
TGTGAAAGATAAACAATAGTTAATATATATTTCAATCACCCCAAGCATTTAGAAGCAAAG
CAATACACACCTTCCATGATCCAAAGTTTGTAGGATTACGTTTTCTCGGACGGACGGTAA
CCCACGATCCTTTGAGACGATGATCCAACTACCTGTTTTACAGACTGAGGCGAAGACAGT
TAATAAAAATACCAATAGAGAAATCTTTCACTAATATAGGCTTACAATTGTCCATTATTT
TTCTAATGCACAGATAAGTAGGAAACAAATGTGTCAAGATCATCCAAGATGGCCTGGAAT
ATTAGTAGGGATGCAAGAATTATTCCTTGACATCTCTTTGCACATACTATTGTTTTGAGA
TGATGCTTCAGCATCATTAATGTTACAATACTGAGACATATTGATCATTGTGTGAATATA
AAAACGGGAAATAGTTGTGCCAACATATAACAACTACTATGATGTCAATCACATGTGGTT
TAAATGTATGTGGAGTCTCATTAGTCAACTCTTAGTTTAAGCGGAAAAGATCTTACTAGC
CTATATAAGTATCTGACAGTTACCATTAATAACAAATATATTTAACATGGATAATAATTC
AGAATACAAAACCGTGATTTGAAGGTTAAACCACAGATCCTACCAAAATAATTACACATG
AATGGCAGGTTTTCTACATGATTTGAAGAACAAAGATAAGGGACTAATGTTGAAATCTGT
GATGGGCTTTAGGTCCATAAGAGAATTTAAGAAATCTTGAAGGGTCCATGTAGGTGGTGG
CATGACAAGGTGGTGGTGGGAAGT
