| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_167282
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_25126 |
1 |
1334 bp |
MLOC_25126.1 |
Available |
Available |
LOC_Os07g44800.1, FRAME:-3, EVALUE:3e-158, 13107.m04716 protein SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A, putative, expressed |
CDS Structure of MLOC_25126
Contig Sequence (3814 bp)
>contig_167282 3814 assembly3_WGSMorex_rbca.fasta
TTACAGTTTATATAATTATATAATCTTGCCTCCAATGGCCTCCAAACCAAACATGCCCAA
CATGCCCACCTGGATTATTTTTATAAACCAGATTATATAATCTATGTTCATAATCCAGAT
TATTATAATCTATTATGATTCCAACCAGGGCCTAAAATAAGTCCCATGGATCGAAACATC
CTCTAAGGTAGTATCATGTATTGGGACTAGCAAACATGCTAATGTGGCAGACAATTAAAG
AAGANNGAGAGGGTTAGAGTAACATAGGTACTAGATACCATAACATGTTAAATGTTACTC
CCTCCGTCCGATAATAAGTGTACTTTTTCCTTTTCTGTCAGTCAAACTAGTTCAACTTTG
ACTAACTTTATTGAAAAAAATGCTAGCATTTATGACATCATATAAGTATCAATAGATTTG
TCTTTACATGAAGTTTCCAAATATATCATTTTCATGTCATATATGTTGCTACTATTTTAT
ATAAAGTTGGTCAAATTTTAAAAAGTTTGACTAAGTACAAATCTATATGTACACTTATTT
GCGGACGGAGGAAGTATGCTACTAATGTGTCATGCATATCAATAAATAAGGTCATCTATG
ATACTCCCTTTATCTCAAAATAACGGTCTCAACTTTGTACCAGCTCTAGTATAAATTTGT
ACTAAGCTCAAGACACTTATTTTGGGACGGAGGGAGTACTATTTTATGATACTATGCACT
ACAAAGATACTCCCTCCGTTGCTAAATATAAGTCTTTTAAGATATTTAACTAGGAGTCTA
CATACGGAACAAAATAAGTAAATCTACACTTTAAAGTATGTCTANNNNNNNNNNTATGTA
GTCCATTAGTGAAACCTTTTAAAGACTTATATTTAGGAACGGAGGAAGTAGTACTACTAT
ATAATACTGCCCACTATGGCCAGCCTAAGCATAAGCACTTAAATTGCGTTGCCTCGGGTT
CTGCATCCTTTCTACGGCATCTGCATCATGAGCATTGCCAGCAGAATACATGTCCCCCAA
CATAGCACACAAATTTCATTGCAATGGAATTTCAATTCCCCTGAACCGGGAAACTGCACT
CCCATTAAAATGACTGATCACCAAATCGACCCGTTGTTTCAAAAATCTTGAAGAAATCAG
AAGAATAAAACCAAGGATTTTAGAAGACATGTCATCAAAAAACAACCAGGAACGCGCACG
ACATCAGAATTATAGAACATCTGTCACCATCCCTTCTTAACATGAACTGCACTTCGTTAC
TGTGTAGCAGCACCACAATCACAGATTCACAGGCATACATATTCAGGAATTTCCTACACC
CCTACCCTATTCCCTACTCCTGCACTGATACGAGATGCTACAGCCACAGGCTCTGCAAAA
CAGGGAGGGAGCCCTGCCCTTGCGCTCATGCATGTTCACCACACGGGACAAAATTACATG
CACTCAGCATATGCTACCGTGGGGCAAAACCACCACTCTATCAGACTATGGCTGAAATCC
GAGCATGATGCGCAGCTCCTCAAGGCGCAGCTCCTTCTCCTCCTTGGAGCTCCCTTTCTT
CCTGAACGCGCCGCTGATCAGCCGCTTCTTCCTCTCCTGCAGCTCCAGGACCCTCTCCTC
GATGCTGTTCTTCACGATCAGCCGCACCACCTTCACCGCTTTCTTCTGCCCGATCCGGTG
CACCCGGTCCATGGCCTGCTCCTCCGTCCCGGGGTTCCACCAGGGGTCGAACAGGTACAC
CGTCGACGCCGCTGTTAGGTTCACTCCAGCGCCTGCGGCCTTCAGGCCGGCCAGCAGTAC
CGTCGGGACATCGGGGCCGACGACCGCAAACTGCTTTATGACATCTGACCTCTTCTTCAC
GCTCATGGTGCCGTCAAGACGTAGTATTTTGAAGCCTGCTCTTTTCAGTGGTCCTTCGAG
CAGAACCAACATCTTCTGGAACTGGGAAAACACGACAGACTTTGATGAAGGGTCTTCATT
ACGTGAACGATTCAGTAGCTCCAGCAGGGCTTGCACCTTGGAAGAGAGAGGTTTGTCAGA
GTCAAGACTGCCCGAGTCATCGTCATCAGGATGCTGTACCGCCGGAGCAATAAAGAGGTC
TTCTTTCGATAGCGAGCGCCGACATATCGGACAACGGGAACTAGCGCTCTTGAGGATTTT
CAGGATGCAGGTTTGGCAATATATGTGAGTGCAGCTTGTTATAATAGTTTTAGATGGAGG
AGACAAGCAAATTGGACAGTCAAAGTCCTCTCCATCAGCAACCAATGAGGCAAGCTTCTT
CAACAACTCGGGGCTATTGGACACATCTGCAACAAAGGTAACAGATTTCTCTATAAGTAC
AAACAAAGATAGTTCCAAAGTGAAAAGTACAAGAACAATGACAGACATAATTGTGTTGCA
GCACGACACGGTAATTCAGGGATAAGAAAAACTGAACAGGGACAGGAACAACTGATTTCA
TCATTCCTTATTTGTTACAGTGGCAAAAGAACAATATATTATCAACAATAAAGCTGAAAC
AATATATTCCTGCTCAATGCAAACTTCATTTTTAAAGAACAATATTATTATTGAGTCAAG
CAATTCCTGCTCAATGCAAACTTCATTTTGAAGAACAATATTATTATTGAGTCAAGCAAT
TCCTACAATCAACCTAGGTTATTAATAAGCACTACCCCTAAATATTCAACGTAACCTGTA
TGGGATTTAAGACAGAAGTCTGATTTAATATTTTCTGCATGATAACACCTAAAGTAAGAT
TTTTTGCCACCCTGGTAGTGACAACAAATTTTCTGCAAGGTGTGAGAAATTTTTGGCTAT
GCAATGGTCTAGGGATATTACTGCAATAAGCAAATTCATTTGGTAACTTACTGAGATTTA
TCAGCAAAGCCACCATGACTACTGTGTACTGTGGACCTGTGGTAACTGATAACAAGTTCT
AGTGAAAAAATAATCATAATCCCTTTGCAAGGTAACTACTCACTCTGTACCTTATAACAA
GACCAAAAACCTTGCACTATACTCCCTCCTCCACAAAATGTTGGGTGCATTAGCATTTGT
ATGCAATCCCATAATATTAGGCACATACTGCTTCCTCTCTCTCTCTCACCTACAGTAAGG
ATCCCTATTTTCATGGATCCCTCTCTCTCTCTCTCACGGGAAGGAATTGACGGGGACTTG
GTCAGAGTAGATCATGCATGCCTTATTCTCTGCGAACCTGTACAATTCCAGCTGCGCTAA
TATTCGTGCTACAAACTAGTACGCCTAACAATATGGTAAGGAGGGAGTAACAAACTTAGT
GAATGACTACCAAGTCACTTACTAACATTGGTTCATCTTGAACAGATAAACAAATAGCAT
TTAAGTACTTGCTAGTTGGACACAGTACAACAGTATGTTTTCTGAGCAAGTAAAAGACAA
AACTTCATTCAGATAGTAATATACTATAACTCACATAGTCACATGTGATACTTCTTTAAC
AGCAAGATGATTAAATTAAAATAATTACATTTAAAGTGACAAATTTGGCAACTGAAATAC
AATTATGTCTATACTATATCATCATAACAAAAAAGCATGAATACAAAACAGAAGTCTATA
CCTTCAAGGGTGTTAGCAGGAAGCCATGATTTAATGTCAAAAGGGCACAGTGCTACATCA
TTGCAGAGCTGGCGTAGCCTCAGAATCAGAAAAAGCACGGTTGAGTAATTACGCAATATC
GAATCTCTGTCACCAAACTCCATCATTTTGTTTCTCCCTTCCGATTCCATCTGATCATAA
CACTCCCTTTCCTCTGCAGAAAGCTCAATGTAAC
