Contig Data
morexGenes
Links



Map Locations of contig_167232 (3250 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_167232

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_25120 1 901 bp MLOC_25120.1 Available Available None
MLOC_25121 16 2930 bp MLOC_25121.15 Available Available LOC_Os09g28770.1, FRAME:-2, EVALUE:2e-151, 13109.m02839 protein patatin, putative, expressed





CDS Structure of MLOC_25120






CDS Structure of MLOC_25121






Contig Sequence (3250 bp)

>contig_167232 3250 assembly3_WGSMorex_rbca.fasta
CGGACTTCATTTCGGTGATCTTGCTTGACGAATTTGCTTTTCATCAGACAACAGCTTTGC
AAATCTGAAAATAAGGTGCTAATTAGCTAATAAGTAGAGATGCATACTGCAATTATAATA
ACCTGATTCCTGATAGGTGGTGCCAAGCTCACCTCTTGAGAGCTTCCTCATTGGTGTCCT
CTGGCCAGTTTCCAAATTTGCCCATGAGACAGGTTTCTTTAGAAGCAACTCTCCAACATT
GACAAGTTTCTCCAAGTTATCCTGGTGGCAACATCAACTAAGGAGAGTGTCCCCCGTAGG
GTATCATCCTGTCATGTAGAAATGGTATTCTCTGAGTAAAAGTAGGCTGATTTATTGGTT
GCATTATACTCCCTCCGTTCCAAAATTTGAATTAAAACCACGACACTTATTTTGGAACGA
AGGGAGTACAAAATAAGTTGTCTGCATTTTACTTACTTGAATTCTCAGATAGTTCTGCTC
AGAATGCAAGGCATTGAAAATAGTAGCAATGTGAATATCCACCATATCTGCACTTGCCCG
TGTGAAGAAATCTACTAATGGTGTGGAACCACTGCTAAGTAACCAATCCAACACTCCCCA
TGATTTAGCCTTTTATGCATCGTACTTCTCTTCAAATTTTGATGAGCCTGTGCCAAGTGA
AATGACCAAAAACCGGCCATAGTCCATAGGTTTTATCGGGAAGAAATCTGAATCTTGCTT
GAATATCTGTTTGCTTACTTATCGAATGGCAACTAAGGCCTCAACACAACAAAGACATAT
ATTAGGTCTATTTCAAAATTTTAAGACTTTCCTTCAGTCTCTGAATCAAGCACATGCCCC
AAGCTGTATGTTATGCAAAACTACAGGCAGCTGTAGTACCGGATTATTGGCAGCTACTCC
CCCATCAATAAGATTAAACTCCTTGGTGTTTCCATGAGAATCTTCAGTCTTGAAGTAATG
AGTAGGCAAATATCTGATAACAAAGCATCCATTGTGCTCTTCTTCTTCTTCTTAACCTGT
CACATGATAATAGGAGGTTCATTTTTGTGCAAATTTCCATCATGAAAGATTAATGGAAGT
TCTCGACTTCTCACTTCTGCTTCGTACATATCTTCTCCCTTTGAAGTAAATTTACAGCGA
AAACAAATAAATATGCATTTCAGTAGCATGTATTTCTTGTACTATAATTAAAGTGAATTG
GCTCTGATTTACTATAACTGGCATCCAATACAAAGAAACATCAACCATATTTTACAGGTA
CTCAAATTAGGTCTCCCAAAAGATTTGAGAGAGGGGGGAAGTGGGAAACCTCATACGACA
AAAACATGATTGATTGTAGCCGCCTGATATCAAAAGTCGGTATTACCACATTTGTTAACG
TCTGATGCAGCCTGCCGCTTCCTAACTTCTTTCTCACAACTTCATGAAGGTACTTGCCAT
CATAACAAGGTCCTGAGAATGAGCGAAGTATCCTCATTATCCTACCAAATGCACCCCTAG
AAAAAATAGAAAATATGTGTTACTGGACAAGTTCCCAATTCAATCAACAAGAAGTCAAAA
ACATAACATATGTGTTCACCTGAGCTGTGGGAAAATTCTGGGAGCATGGTCCATATAAAA
TGCTTGAATATCCTTTGCCGCAAAAACTGGTCTTCTCTTCTTATTTGGTATAGTGAGCAA
GGTAGTCACAGGTCCCCTTGTGCTGGTCCCAGCAAGGACATCAAAGTAGTCTGCTAACCG
GGCTTCCGCTCCATCAAGTTTCTTTAGAAGTTAACATAACAGTTTCAGTGGGACGCCATC
AAGATCATCAATTAAAAATGAATGTGTTTCTAAAGAAAGGAGCATCTTCTGGTGCATATG
GAAACAATAGCATTGTTACACGTCAAGTATATTTAGCCCACGAGCCCGGAAGAGATAAAA
GAACCAGAAATACAGAACTAGCACTAGCAGAATATTGAACTTATGTAATACAAAAAATAA
ATCCAATTTGCCAAGAATTTGAATCTTCTGCTCAACTGCAACTGCTCAACATCTACAGGT
GCATAAATAACAATAAAAGAAGAGGGAGCAGACAATAACAAGACAACACCCTCGTTGTGA
CGCTAATACAAAGTTTCAGATTTACTTGGGTTATGGAAGTACCTTTACTTTACAGTTAAG
TTAACAAGATATGTTTAGTGAATTGAGTTAAATCCTGACAGTTTGAACTTCAAACAAACC
AAACAACCAAATTGCAAGCTTATTTCATCTAACACAATATATGGAACATGGACTTGTAAT
ATCTTATATTTCTCACCAAGTGACTGTTGCCATGGCAATATGCCAACATCACAAGATACG
AAAATCAATTATGTACATAACTACAGGTTTACCTGCAACTCTGATTCTAGAAAGGCAAGA
GCAACAGTTGGAATGATTCCTCAAATCCCTCCACCATCGATAGAGAGAATTGTGATTAGG
TTGCCATAAGTTGGTGGGTGTCTGCACAAAATATGTTTTCCCGTCTCCATATTTGTGCTC
TCTTCAAGGAAAGGTTGCAAAGATTTGCAGTTCTACGAGGACGGCGATTTGAGTCCTCAA
ATTAAATCCTGACAGTTTGAACTTCAAACAAACCAAACAACCAAATTGCAAGCTTATTTC
ATCTAATACGATATATGGAACATGGACTTGTAATCTATTATATTTCTCACCAGGTGACTG
TTGCCATGGAAATATGCCAACATCACAAGATACGAAAATCAATTATGTACATAACTACAG
GTTTACCTGCAACTCTGATTCTAGAAAGGCAAGAGCAACACCTGAAATGATTCCTCGAAT
CCCTCCACCATCGATAGAGAGAATTGTGATTAGGTTGCCATAAGTTGGTGGGTGTCTGCA
CAAAATATGTTTTCTAGTCTCCATATTTGTGCTCTCTTCAAGGATAGGTTGCAAAGATTT
GCAGTTCTCCGAGGACGGCGATTTGAGTCCTCAAATTAATGTACAGAACACATATTAATA
CACTTCGGATGAGTACTTTCGTGGCAATGCAGGTAGTGAAGGTCTATAGCATTCAGGAAA
AAGTCATTACGAATAACTTAAACGTGCGAAAATAAAATCTTACTAACCTTAATTCATGAG
AAGATATGTAGCATTAAAGTTGTAAAAGTGCACGCTTCATTTTCTGAAACCTTGGTAACA
GTGACTACTAAGTACGTAATTGACACTTGCATAGGGGTACCCTAATATGATAATATTGGA
AACAATCATT