Contig Data
morexGenes
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Map Locations of contig_166855 (2256 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_166855

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_25056 5 2215 bp MLOC_25056.2 Available Available LOC_Os03g49900.1, FRAME:-1, EVALUE:1e-19, 13103.m05424 protein zinc finger, C3HC4 type domain containing protein, expressed





CDS Structure of MLOC_25056






Contig Sequence (2256 bp)

>contig_166855 2256 assembly3_WGSMorex_rbca.fasta
GTAACCAAGCAAGTTGAGGTTTCCTATTCCTGAGATGAATGAGAAATCTGCTCCTAAAGT
AACGTGTCGAGTGATATACTTCATAAGTACACAAGTCAGTTTACATAGCTAGAATGGATC
CAGAGGAATACCTAGTCGTTTAACTAGCTAACAACAAGCATTACCGAGTGCAATTTCCGT
GTAATTAGGTTTCTTTAGACCTATATGAGAGATGACCTGGTAAGGCACGAAGTTCAGATA
TCACTTTGTTGCGGAGCAAAATTACAAGGGATTTAGCAAACGACCCACTGAGCACGTCGC
GACGAAAGAGCTCCCCTCCTTTACCGGCATCCCTTTCGCGATGGCTTTTGTCGCGACAAA
AGAGCTCCCCCCTTCCCTTCCCTTCCTCTTCTGTCCGCTGGATGGCCTGGAGCGCGTAGT
CCAGCTGGCCCCTACTGGATCCATGGATCCGCGTCCGGATATTCCTTGTCCTCCTATCCC
ATTCTACACAAGCAGATTATCAAAGGCCACATATTATAAGTGAATTACCATGTCTTTGGA
ACACCTCCTCCACAACTAGACAGAATTATGTAGTGAATACCCAATGTTATTTGTATAGAA
TAAATGTGCTTATTCCTCTTTGCCATCTTCGTCAATAATGAGCTTGAACAACAGTAGAAA
TTAACCAAATGAGACTCCAGTCATAATTCCTGTCATAAATATACAGCTTTTACTGTACAA
GGAGGAGGTAATGAAATGAGAAAACAAAGAGCATTTAGAACCTTGAACCATATTGTACTA
TCATAAGCAACTCATCAATCTTTGATGAGACAAAAATATATCTTTCACTAACAATTCCAT
CTTGTAATTTAATAACAAGCCTTTCAATGAATCTCCAAGCGGCAAACAATACATCAACCA
CTTGGAGCAAAAGTATAGGTGAGAAAATATCTACAACTGGGATAAACTGTGCATAAGATG
GAGTACCCTGCTAAGAATATAGACATGCAAATTGTACTTAGACTAGCAGTTGAACAATAT
TTCAACACAGTTAATAATCATATTGACCTTCACAGACAATAGGTGACTACAAGCTTGCAC
CTTCAAATTCATAACACAAAAATGGAATTAATAGTTCACATGTGGTGCCACAATTTATGT
GCAGGACAGAATGCATAGGATATTGGTAGTCAGCTCAGAGATTACATATGTCGTATCACA
TTGAACAGAAGTTGAAAGCACGAAAAGATGGTAAAATAGTGCTACCAATCAATTTTGATG
AAGAAAAACATTTGGGAAAATGGAACTGAGCAAATCTCTAAGCGCATACATAGGAGAACT
TGAGAAATTACGATAGGAATTATCAGTACAGGGCTATCAATATCCTACACATCACATAGT
TTGTGTACATCAGGATCCCTTCGGAGAATAATGAAATATTGATAATTCAGTTATTGCTAT
ACCAAGGATTCACTGTATACCGACCATTGGATTGGACCACCTTATGCAGACAAGAAAGCA
AAGGACTGGGAAATCCGGTAAAATTTGTCATCAGGTAATTAATGAGGTCGGCTCGTTGTT
GGGCATGTCCCATGGGGCAGGACGCTGGCGAATCCCAAAAGATGTAAGATACTCACTGTA
TCCCACTGAATGACAAGCATGTAAAGGTCGAAAAAATGGTAAAAAGATATATTTGTAGTT
CCGAAAATAATCTGGAATGTACACGTTAGAACACACTATCATTCCACACAATTCTGTGTG
AAAAATCTTTTCAAATCTGTCCGACATGAGAAAACATAAATACAGTGATCTAAAACAGCA
AACGATAGCAATAGTACCTGCTATCGCAGATAATCACATTTTTTTGTTTTTGTGCAAGAC
CGCAAACGATTTTCAATGAAAAATTGCAGATTCATAGTCTATTAGAAAATTTATATATTA
GAATGTTTCTCGAATTTTCTGGAACTCGTAACTCTTTGATTTATTACCTTTTTGAAGAAA
ATGCTAACTAAAGCTTGAGCCAAAAGCAATATCCAGTCAGATGGCATATCTCAGGAGGAG
AGTCACAAAGCACACATGAAGTAGAAGTTCTTAGAGTTGGAAGTACCTAAACAAGACATA
TGCTCCAAGGAAACAGGCTGCAGTGGTGAACTCCCTCAGCGAAGTTCCTTCGGAATGATT
CTACTCGCGCCCATTTTACGTTTCAACTCCGATATTATTTTTCAAAGATGTAATCATATA
CAAAGATCCGCATAACGATGGAAATATCTTGCTTTT