| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_166441
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_24977 |
1 |
197 bp |
MLOC_24977.1 |
Available |
Available |
LOC_Os05g28210.1, FRAME:+2, EVALUE:5e-14, 13105.m02905 protein small hydrophilic plant seed protein, putative, expressed |
| MLOC_24978 |
1 |
424 bp |
MLOC_24978.1 |
Available |
Available |
LOC_Os05g28210.1, FRAME:+3, EVALUE:3e-21, 13105.m02905 protein small hydrophilic plant seed protein, putative, expressed |
CDS Structure of MLOC_24977
CDS Structure of MLOC_24978
Contig Sequence (3749 bp)
>contig_166441 3749 assembly3_WGSMorex_rbca.fasta
AGCGAGGGAACGAGGGTCGGGGGGAGGAGGACGAGCGAGGGAGCGAGGGAACGAGGGTCG
GGGGCGAACCCAGCGTAGCTGAGCCCAGCTCGGCTGTATGGACGAGCTCCCTTCAACATA
GCTCTGGGCCTTTTTTGCATCGATGGAGCTATGCTCGGAAGAGCCCATACACCCTGCCAA
ACATCTAAAAATGAGTTAAAGAGGGAACATTTGGCCTTATGCACCCTTCGTGCAGGCTTC
CAAACACACCCTCAGCTTCTTGGCTCCTCCCGCTTCCTGGGATAATTCCATGCCCTGAGA
GGGCACGCCCGGTACGTGTTGTCTTCCAGGCCCTTGCCACGCACGTGGCGAGACACTAGG
GACAACGAGCAGGCCGGCGTACGTCCGCGTCGCTGCACACGTGCCGCCTCCATGCCTCAC
GACGCACCGCCCATCTCCGTCTATAAAAACGCAGGCGTATGGCTCGTCCTCCCCAGCATC
ATTGGCTAGAGCACCAGCAGTTACATATACACCACACAAGCATACACAAGTCAGCTTCAG
GAACCTAGCGGTCGAGCGCTTGTCGGCAATGGCGTCCGGTCAGGATAAGGGGAGGTCGGA
GCTGGACAGCTTGGCCCGCGAGGGGCAGACCGTCGTCCCTGGCGGCACCGGCGGGAAGAG
CTACGAGGCGCAGGAGAAACTCGCCGAAGGTACATATGCTACTCCCTCCGTTCATAAATA
TAAGTCTTTTAAACTAAAGGTCTACATACAGAGCAAAATGATTGAATGTACATTTTAAAA
TATGTCTATATACATCCGTATGTAGTTTATTAATGAAACCTTCATATACATCCGTATGTA
GTTTATTAGTGAAACCTCTAAAAAGACTTNNATTTAGGAACGGAGGGAGTACTACGTGAG
AGTCGAGACATGTCGATTGAGAGTCGAGACATGTCGATACATACTGAACCTGCGCTTTGT
CAGGTCAACTTCTGATACTGATCACTGGCATTGTTGTAACACGCGCGCATTTGTGCAGGG
CGCAGCCGCGGCGGGCAGACTCGCAGGGAGCAGATGGGGGAGGAGGGGTACAGCGAGATG
GGGCGCAAGGGCGGGCTGAGCACCAACGATGAGCCCGGCGGCGAGCGCGCCGCCCGGGAG
GGCATCGACATCGACGAGTCCAAGTTCAAGACCAAGTCCTAGACGTTCAGTTCAGTGCCT
ACTGCCTAGCTAGCTAGCAAAGCAGCTGACTGCTCGCTCGTGTTTGGATGTAGTTCGTTT
ACTGTCAAGGTACTGAATAATGTAGGTCGTCAGGTACTCGGATCTTGATGTAATATGCAT
GTAGGTGATCATGTGTACCGCTCGTGTGTGCTTTCAAGTGTCGCATCTAGCTTCTACCAG
TAGCTAGTAGAGTAGAGGTGTCGTAAGTTGTGACCAAGCTATGGCGTTCTCTGTTATGTA
GTGCGTGTGCTGTTATGAATCTGAATCTTCCGTCTTTGTGCGATGTTCTAATCTGAATCT
CAACTCTCAAATCTCAATATAATCCGCGGCTTTATAAGAGCAAGTATAATAAAATATAGT
CATAGCCCATAAGGACTAAACAATTATATTTATCATATTTATCTTGAGTTGCATGAAAGT
GAACACAAAAGATAGAAGTGGACCATAGTAGGCGAACATCAATGAACATCGAAAAGCATT
AGAGCATGTGTATAATAAAATACTCTACAATCATAGCCCATAAGAACTAAACAATTATAT
TTATCTTGCAGCCCAGACGAACATCGATGTTAAAATATCACATCAGCTGCTAAAATATGG
TTCAGCAAACTATACATGCAAGCAACACATACAATTAAAGCTACTAAGTTCTTATGGGCT
GGGGTTGATCATATAATACACAATATAAAGAGGTGTCATTCCTAGTATATCGAAAACAAT
TGAGGCAACCATTACATATCATAAAGACAATAAAATTAATTGGTCAGCCGACCTTAATAA
AATACGAGGGTTGTTTGGATTCAAGGGACTAAAACTAGTCTGACTAAAGATAAGAGGCTA
AAGTTTCAAGCATCCCTGACTAAAGAGAGACTAAGTGTCTGTTTGGTTCATGACTAACTT
TGCCACAACTAATCTTAGTCAAAGTGTGGCCGTCATAAAAAGTGTGGCTAACAAAATGGA
CACCATAAGTATGGCAAGATTTGACAAAAAATTAAGTGTATGACATATGAACCATATAAT
TAGAAAAGTGTGGCAAGCCACAAATGTGACAAGGAATCAAACACATGCCTAAGGTATTGT
GGCATGACTAAGGTTAGGCGTGACAACCTTAGGCTGGGAACCAAACAGTCCTAAAACTAG
TCTTGAGGCTAAAATCTTTTAGTAAGGAGTACCCCTACTAAAATGTGGATTAGTCCTCTC
TCTCCTCATTTAACTCCTCTCCTTTAACACATTCGAGTTCTGGATTGAAGGATTTGGGGA
TACACATTCGAGTTCTGGATTGAAGGATTTGGGGATAATAAATGCTCATTAACTTGNNNN
TAGTCTCTTTAGTATTTGGATCCAAACATGGATGAGGCTAGCAAGTTTTAGTCCCACTAC
TTTTAGTCATGGGACTAAAACGTATTCAAACATCCTCTACATCTTGTGTAATATCTAAGA
GCCAAATAACAAGTAGTGGTTTTCCAATCTCTTTAAGAACGAATAACCATCTCGGGATGT
GTTTGTGGAATAATTCTGAAGGCAAATAAATTTGATTGCTAATATAATACGGGCATTGTT
TGTTGTGCTACATTACAATTTTTTGACAATATCATGATATTACAACAATATATGAACTAT
ATAAATCATTTTGTTAAGTCAACCTAGCCATGCAACACCAAGGGCTAAGCGAGGGAGGTA
TTCACCTTGGGCTTGTAGGGTCGGTGGACTCGAGCGTGCCAAGACATCCGGGGCGCCTAG
TCCCTAGTCCAAGTCTGACCATGACTGCTAGCGAACCCCCAAAGGATTGGAGATTATTGA
CGAGGATCACAAGTAAGAAATATATATCTACTATTAAAGAAAAATCTGTCGTCGTGACGA
TGGTTCAACCTCCTCCTTTTTATCACCCCCACAACGAAATTCTCGTCGGACGATCCAACT
TCAAAGAAAACAGCCGGTTCACGTAAGGGAAACCAGCGTTAGAAATAGCCACGAGCCCAC
TAACACACGCCCATGATCCAATCTCCCTCCCAAGAGCCTGCGCGCCGCCTCCGCGTGCCG
TGGAGGGCATCGTCTCTCCGGCCGCTGTCACTTGAACCCAATCTTCCCAGATTCCAACCC
TGATCACCTCACCGGCCTAGTTCCCAATTCGTCACCGCATGCCCCGCGCGGCCAATCCAT
GTCTCTCACCGGCGATAAGTAGGTGTGCGGCCCCGCTGCCGCTGGCTCTTGTGGTTGGAC
CTATCGTCCCCGACTCTCTCCTCCTCCGCACCCAGGCTGCACCTCCCTCCACGCGATGCC
GGCTGACGACCCTCGCCTCGACCTCTGATTGTAGTTGTTGTCTTTTGTAATGTATGTGCA
ATTCTGATTGTTTAGTGTGTGCTCTTATTTCATCGCTCACCTCATACTTAGTTCAACATT
TAAGCTTACACTGTTGTCACCTGATGTCGTTTAGTTCAGTTGTAACTTGTGCAAAGGAAA
TTAAAATTATTTTATATCTGGCAAAGCTTCAAAAATCAGTGGAGTCACGGGTCAAAGTCA
CCTATGTTCTATAATATCTACATGATTGA
