Contig Data
morexGenes
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Map Locations of contig_166265 (2625 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_166265

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24943 1 782 bp MLOC_24943.1 Available Available LOC_Os05g49440.2, FRAME:+2, EVALUE:4e-92, 13105.m05291 protein DUF1264 domain containing protein, putative, expressed
MLOC_24945 1 126 bp None Available Available None
MLOC_24944 1 519 bp MLOC_24944.1 Available Available None





CDS Structure of MLOC_24943






CDS Structure of MLOC_24945






CDS Structure of MLOC_24944






Contig Sequence (2625 bp)

>contig_166265 2625 assembly3_WGSMorex_rbca.fasta
CCCTCTCCCCTCCCCACCGCTTGCCCGACCTGCCTCCGTGTCCTCCTTCTTGGCTACCAA
CCAGATCCACCACTTCTGCGCGCACCTCAACCAGGACCTGCCTCCCCACCCCTCCACGGC
TATCCACCAGATCCACCAGCACCTGTGCACATTCCACTTCTACGGGGACGACATGACGCG
ACATGTGGAGACGCACCACTTCTGCGCGCACCTCAACGAGGACGTTCGGCAGTGCCTCAT
CTTCGACGGGCCCGACGCCGACGCGCGCCTCATCGGCCTCGAGTACATCATCGTCGAGGA
GTTGTTCCTCACACTGCCCGACGAGGAGAAGCCGTTGTGGCACACCCACGAGTTCGAGGT
CAGGGGCGGCGTGCTCTTCATGCGCGTCGTGCCCGACGTCGTCGAGCACCGCGACCTCGA
TAAGGTGGCCAGGACCTATGGCAAGACCGTCCACTTCTGGCAGGTTGACCGCGGCGGCGC
CCTCCCGCTTGGCGTGCCCCAGATCATGAAGGCCCTCACCCGGGAGGGCCAGCTCCGGCA
GGACCTCGCCGACTGTAAGCATGGCTTTGTTTTCTGGTTCTTGGTTCATTCGCTGAGTGT
CGTGTCGGATTACTGATGATCGTTACGTGGTTGCAGGTGTGGAGAGGAAGTTCGGCATGT
CGTTCCAGAAGGATACATCCTTGAGATGGAGGAGGCTGAGGCCATGGCACGCGATCCAAG
CTCGTGCGCGATCTGTCCTCCTTCGGCTACCGGCGACTACTCCCGTTCCTCAACCAGATG
GGCAGCAAGGGTAATGCCAGTGTCCCTCTTCCCTGATTTCCCTCCCCCTGTGTTCACGAT
GCTTGTACTCGCAGTTCATTCCTCATTTCCCCAATGTGCTTTCCAGGTTCAGACATCTCA
AGCGTCAAGGAACTTCCCTCAGAAAACAAGGTCTCTATCCCAAACAAGGAGCTTGGCAGA
TCTTTTGCAGAATGGACACAATTGCAGCACAGTTTGCACAACTGAATTTGTTTGTTTAGA
GTACTGTTGCTGCCCCCAAGAAGGCCACTTCCAAGGAGGTAGAGGAGGAAGATGAGGAGG
AATCCGACAAGTCCAAGTCAGAGATCAATGACGACGATGACGATGAGGGTAGTGATGAGG
TATAACGCACCACATCCTGTGTACTATGTACTATCTCTTGTATCGAACTTGCTAGGCATG
CTTTTTTGCTTCACCAGAACAACATGGTTCACACCTGAGAATAATATCCATCCACCCCTC
CTGCACTCATAAGAGCTCAATTTAGGAAGTTATTTCTCACCAATAGCATCTTGCCAGGTA
GTTTCCGGTGGCGCTGAACTTGCCATGTTGTTTCTCTCCGATAGTGTGTTATTTAACCTT
TACATATAACATTCCTTAAGCTAGTATTGTTGTAGCACCGTACAATGTGTTCATGCTATT
ATTGGTGTGAACAGTCTTGGCACCTAGTATCAATGGTTCAGTTGCGGAATGCAGAGCTGT
TTGTGCTAACATGATACATATTAATGTTTTATCGAAGCCATGTTTGCTTTTGTTTAAGCG
GGCACTGTGTAGTCTGTTGGAAGGTTGACTTCCATTTTGCTGCTGAAATACCACCATTTC
TGTCTTACAACTGCTCTGTTCGATAATCCTTCACCTGTTGTTTTATGAAGATGGCCTTCA
GCTTCTCTCCGTTGCCAAAACAAAGTTGTACCATCAGTTTCGGATCAGCCTGGCTTGGTC
ACTTGTTTCACCGTGATGTTGGTTTCTGTTATTTTTATCTAAACCATTTCTGCAACTCAA
ATTATTCCCACCTGAACAAGCACCATTTGTGTGTACATGCCTTTGCACAACCATATGTGA
TCTGTTTTGTGCTATCAAACCATTTCTGATGGTTGTATGATATAGTAGTCGGCTGCTTTA
CTTAAAGTGATGATAATTTTTCTGTGTTTAGTTCTGCTGCATGATTAAGGCCCTGCGCAC
TACTAGCATTTAATTGTCTGCCTTTTAGATGTAACATTGCAATTCAGATAATAAGTGATG
TACAGTTCTGTACTGTTATGTGTCTTTGGCATTTTCTTAGAACATTTTTGTAGCTTCAAC
TATGAACATTTCTGTCACATACCGTATCTTTAAATTTGAATCTTGATTGCTTCTATTTAC
TCTGAGTCTAAGATGTGTAGTACTAGCATTTTTATTCTTATATGTTCATTCTTATTCATA
TATGTTCATTCTTATTTTTTGCATAGGTGAAGTGTGAATCCAATACCGAAGCTGTGAAGC
ATATCAGCAAAGAGTAGCATATTATGTATTGCAATTGTAGGCAATAGTAGGCTTATTTGG
GTTGTAGTATAATGTAACGATTGTAATAGACTAATGTAGTGTTGTTTTGGACGAATTCCA
TTTTCTCTTTGGATTGTTCAAAATAATGAATGTGTATGTGATTTGAATACCCTCGAAATG
GTAACCTGGCAAAGGGGTTCAAGTTATAATGGTTGTTTCACATAATTTGAAATTTCTGTT
GTGTGGGACCGATTTCGAGATCAGGATGACATGTGGGACCAATCTGACTAGTGGGACTAG
TACAAAAATAAAATGGCTAAAAAAGAAAATCAATAGAAAGTAAAA