Contig Data
morexGenes
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Map Locations of contig_166202 (4104 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_166202

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24935 3 2486 bp MLOC_24935.1 Available Available LOC_Os02g50490.1, FRAME:+1, EVALUE:5e-50, 13102.m05730 protein endoglucanase, putative, expressed





CDS Structure of MLOC_24935






Contig Sequence (4104 bp)

>contig_166202 4104 assembly3_WGSMorex_rbca.fasta
CATGAATCTTCACACATGATAGACCATTTCTGAGAATATTTTTTAAATAAATTCCATATT
ACAACTTTATTATTTTTCCTTGTAAATTGGTCACATATAATGACATAACGCAGATGTTTT
TCAATTTTTTTAATTTGTTTTGAATTTTTCATGTATGTTTCAAAATACGGTCCAAACGGC
GGGTATGACCGTTCGTAGGTACGGCTTCATTCTTGCAAATATGTTGGTGTTTCTATGATT
AAATAGATAATTATGTACCTAGAAATGATTTTTTGGAAAATTAAAGAGCAATCTATCAAA
CAGTTGTAGTTCATATTTGACCTGTTTCCACCTGAATCAAAGGAAATTTGCCTTTTTCAC
GAGAGGTGGATTAAAAGCTTTTGTCACCAAACAATTTGGTCAATTGTATATTTAATAAGA
CTTGAAATTTTAGAAAAAATATTTAGTCCAATTTTGCAACAAATATTTGGTAGGTCCTTC
ACAAAAAACCCACTTTGGACACTGGAAAAATGGAAAATGCATTTTTTGTACAAAGAAAAT
GAAAAGTGTGTTCACCGGTAGGTCCTGCATAAAAAACCCACTTTGGTACTATTTATCACC
CCTAGTCACAAAATGTGTTCACCGGTATTAGATTTCCACATATTAAGATAGACGACTCAT
GTAGTCATATGATTATTGAAAACCTACAAGGTTTTAGTCTAGGCAATTTTAGGTCCGCGC
ACCTTCAATGTCAGCACCAGAGACCTGAAACAAAATCTAGTTGCAAAATGACGAAACATT
AGACAACGACGGCTTCAAATAACCTTAATGGAACATTTTTGAGAATTTTTTTTATGGTTA
AGAAAAACGTTTGTGGGATGGAGAGCAAGATTCCTCTGAGAAAGAAGGTTGTGATGCTCG
TGTTGTGTGCGACCCAGAGAAAGGTTGGCCCAGCCGCCCAACGGAGAGCCCAGCCTATAA
ACACACAACCCTCAGTCCGCACCCCACCCTCTCTCCCCAAACCCTCGCCTCCTTCCCCTC
CCCTTCCGCGCCGCCGCCGACCCACCCCCTCACTAACGAAGATGAAGACCATCCTGGCGT
CGGAGACGATGGAGATCCGGGAGGAGGTGTACGCGCCGGAGGTCAGCGGCATCACGAAAG
CCACAGCGGCCCTCGGATCGGTGACGGTCTCCCGCATGAGGTGCTTCCCGTGCAAGGTGA
TGAACGCCATCCACTCCCGGTCGCTACGCGCCCAGTCGGCCAGGGACGCCGTCGCAAGGC
GGAACAGGTCGAACCGCGCCGAGTTGCCCGGGCGGGCGCCGTAGCCCGTGCCCGCCAAAA
ACGTGGCGGACGACGCGACGAGCAGCAGTGGTGGCTGTGCTGTGCCATCAAGTGGTACGA
CAGCTTCTTCCTCTCCATGCTCGCCACCAGCGTGTACGTCCCTCCAAACCCTTCCCGTGT
CCACGCTCCCATTCCCGTTCCTCCACCTCTGCAGCTTCTGTCCATCCATGTTCGCACGCC
TGACGACTTGCTTGCTTGCCTACTTCAGAATCATCGTCTCCATCAACTGGAGGAGGTACC
GCCTGTGCGCGCACCCGCTCCACATATGGATCGTCGTCGACTAAACCGCATCTTCGTCTT
CCGCCTCCTCATGTTCCTCGACAACGGCCACGCTGCAGGGATGGGACTGTAAGCCCCCCC
TGCAGAGGTGGTGCGACGCGACATGCTTGGGTGCTTGCGATTTTTCTTTGTGCGTGCCGT
GCTGGTCGTGGGTCAAAGCTTCCTAGGACACGCTGCGCCGGATTTCGGTTGGATCTGTTT
CCGTTAACACGGATGCTTTACTCAGCAGTACTACAACTTTTGACAGTAGATTAATTCCAC
TTGAAAAATCTGGATCCTCAGTCACGGTCATAGCGATACTAGACAACATTTCCTTGGTGT
CCACTGGTCACCTACATTGAGCAGAATAGAGCAGCAATTTGCTTATGTTCCGGACCCAGT
CGCTCGTGAGCACAAAAGTAGTAGCGTTGCTTGAGCATCATCGGGTTGTCGGGATTTTGG
CACTGGTCACCTACTAGCACCGTTGTCCACATTTTGGCACTGGATGGATGCCATGGGATG
ATACTGCGGTTGATGATACTACAGTGTATGTGCGGATTTGCTGCACGGATCTAGCTTTCT
TTGTGCAAGTAGACGAACTTCTTGCGTGTGATTGACTGATTTCTGCTGTGGTTGCAGATG
ATGAAGGTGGACATACTCGACGGGGTCACCATCTTGCGGTTCGAGAAGGTCAAGGATGAG
ATCGCCCTCGACAGCAACGACATCGAGCTCGCGTTCTACCCCCTTATCAACCAGCTGAAT
CAAACAGGATCCAGACACTGTCTTTGCTCATGCGCATGGTGATGTTGCCTGAATAATTTT
TGTTTGATGTGATGCAGATGAGCCTGCTCTACTTCGAGGAGCAGCTGTCGGGGCGGCTGT
CGCACGGCCAGCGTGTCGCCTGGCGCGACCACTTTGGCCTCATCGACGGCCTCGAGGAAG
GGGTACGTCCCCATCGTCGAATTGTTCCGTCTCTCCTCCTTCCTTCCCGGCCGGCACGGG
TGGCCGATCAATCATCGTATCGTTTGGTCGGTCGATCGGGATCTGGGTGCTCACTTTGGA
TTTATCTGTTGCTTTCTATGTCTTTGTTTGGTTCCATTAGATGGATTTGGTGGGAGGGTA
CTACAATGCCAGCGACCACGTCAAGTTCGGGCTGCCCATGGCCTTCACGGTGACCATACT
GTCGTGGAGCCTGCTTGAGTACGGCGGCAACGTGGCAGCCATCGGCGAGCTCGCGCACAG
CCTCGAGTACATCAAGTGGGGTACCGACTACTTCATCAAGGCGCACACCAAGCCCGACGA
GCTCTGGGCCGAGGTAAATATTTTATCCCTTAAGTCATTATGATTAGTTCTTATTTACTG
TATATTTCTTGATGTAAAAAATCTCATAGCTGTTGTACGTGCATAATGTGTGCGTATTCC
TGTATTGCTTTCAGTCATGTACTGCCGATCAGTCGCCAAAGGGGCACAATGTAAACAAGC
AAAAGATTGTATATTAAACCTCCAAATGAAACTTGATATAATTGTTATTTATTTATAGTA
TTTTAATTCATAATTTGACTGATCATATGATTTGTGTTCTACGCTTTGTGGTTAAACGAT
TTCTTTGTCAGGCTCCATCTTTGGAGTACTTATTAGAATAGCAAATGTGAAAGTAAAAGA
ACATACCTCCACATGCAGCCCAAAACCACGAGGTAGAGCACAATGTATATGTTCCAAGAA
TGACTTGTGTTTTCCTCTAGTTCTCTAGTTGCTGAAGGGGTTGGCTATCGATGTCATCTT
AAAACCTTATTTGCTTTCTTGTTTGTTTTATTGTCTGCATGGAAAAATTAACCACGATGA
AGAAACACATGAAGTGGCCTGTAAATTTACGGTGCAAATAATGTTTTGAGGTCAAGACTC
ATATATCATTAGACTAAGTGTCACATCTTTATTTATTATATGTGCAATAGTTGCTGGATT
TTGTCTTTCATGCTAAGAAAGATTGGTGCAGCAACAATGAGAGAAAACTCAAATCCCCCT
TTTGTCATCTAGAACTTTTCTTTCCAATGTCATAAATTAATCATGGATGCCATTACCTGA
CTTCCTTTTGGGTACATTGCTCAATTGAGAAATTTGACCATGGCGTTCTGCTAACAATAA
TCATTGACGATGAGTCCATACCATGGGTTAAGGGCTTAAGACAATAGTTATGTGAGAAAC
AAGCCAAAATCCGAGTTGTATTCCAATATGTTTGCCTTATCATGTCATGTATGAAATACA
TTCCCTTTACATCCCAGTTTAAAGTAGCAGAAGGCCCTCTTGTGGGTAAGCACACAAAGG
GGTGCCACTGCAAGATATCTGAGTTCCTGAAGAAATACTGTGAGTGCTTCCGATCTAATA
TTCTCTCTTCAGAGAACTGCAAATGTATTGTGTTTCTGTGGGTGGGATTGGATCATTTAG
TAATCAACAATGTCGACTCATGCATTGCGTTTTTCTATCACTACTGGTATTTATTCCCGG
TATATGTCTTTCCCGCAACTGTGT