Contig Data
morexGenes
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Map Locations of contig_166180 (2251 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_166180

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24931 1 502 bp MLOC_24931.1 Available Available LOC_Os03g54000.1, FRAME:-3, EVALUE:5e-29, 13103.m05915 protein oligopeptide transporter, putative, expressed
MLOC_24930 1 140 bp MLOC_24930.1 Available Available None





CDS Structure of MLOC_24931






CDS Structure of MLOC_24930






Contig Sequence (2251 bp)

>contig_166180 2251 assembly3_WGSMorex_rbca.fasta
GCACTGCCATCGCTAGCAGTTCCATCGTTTTTTTCCATTCCTTCATAAACCGATTGATTA
AATACAGAAAAAAACCGCCCCTCTCTTCTCCTCCCCCTATCTCTCTGCCTCGCCCACGTC
TCGCCTCTCCCGTATCGGCGGACCGTATTTCAAACCCGCGTCAGTTCGACGAGGGCCAGG
TCTCTGCCGCCGCCGCTCCCCTCGATCCATCGGCCGCCCCTGATCCCGCGGGATCCGCCC
CCCGCTGGCGAGGTAGAGACCCACCATAGTGCCCCAGATGTTCTATCTTGTCAGCCTAGA
CAACTACTCCAGGAAGCTGGTCACGAGAATCCTGCCCGGCATGCGATCCCTACGGGTGCA
CATGCTGTGCGAATTCCGAAGGGAGATGCATGTGGTGGAGGATCAGATCGGGTGCGACCT
GATCCAGGTGGACAACCAAGCGGTGCAGTCCCTGCTGCCCTACATGAGCAAGTTCATGAA
GCTCCTGACGTTTGCCCTAAAGATCGGCGCACATTTCATCGTCAGGAACTCGGGATGGGG
GAGATGATCCCTGACCTGAGCAGGGAGGTGGTGCACCTGCTCGAGTCCTCAGCCATGTAC
GGCGCCGCGTCGGTGGGGGCTCTAGGCGCGACAGCGATGTATGGAAGGGCGAGGAACAAC
GACACCAATGACATGGGGGAGGACATGAAAGCGGCCATGCAGTGGCTCGTGGATTTCTTG
AGAGGGTAAGGGGTTCTGACATGGATGGACATTGCGCATAGGTTTGGCCTGTGGCGCGTT
CGGTACAGAGACGACTACCACATTGGGTGGGTCTGTAGGAAGCACATCGCCGCAAGAGGG
GACGAGGTGTTCGAGCTGCCGCTCTGAACCATCCACTCCGACGTGCCCAACGACAGACGA
CCACATGTGCCTCCTTCTCATGTCACTCTCCTGCTGATAGCATGATAGGTGACAGTTGAG
AATAGTGCAATTGTGTGGTGCATAAGTATGCTCTCTTCTGTTCTTATCATTCTGTTGTGT
CAAATTATGCGTATTCCCGTGTCCTTGTGGATTGATTTATTTGCTGCATTGCATTGATCA
TATCTTTGTGGATTCATCATCACGATAATAGTGATGGGTGTGATTTTCCTATGAGTATAT
TCAGAGCGACATGATTTTATATAGGCCAGGCATTTGATTTCCTTGGAGAAAACACACACA
CACACACACACAATGTTTACAATGGGATTCAGGACGAGCGGTTGCGTCGCTTAATGGACA
CAAGAGAGGCCGAATTCATGGCTTCCTCTACCAATCCAGACGATGATCGCTACTAGCTAC
ATACATGGCGGGCACTGTCCGATGCTCCGGCGAGCTCAGTGCTCAGAAGACCGGGCAGCC
CTTGACGACGATGCCGGGCGCGGTGGGCCAGGTGGCGAGCGGGCAGTGGTCGACCTCGGT
GCCCCACGACTTGAGGTCGTGGTGCGCGTTCTGGAGCGCGAAGAAGATGAGGCGTCGAGC
GCCGCCGACAACACGTAGTTGTACTTCTGCCACCACCCCTTGCGGTACCTGAAGAAAAGA
AGTTGAAGACGGTGCCACTGCCGAGCCAGCTGGCGATGTTGGTGGGCGTGGCCGGCGGCA
TCCCGACGAAGCCGTAGGAGATGACGGGCACGTTGACAAGCGCGATCCACTTCTTCTCCG
GGAAGGCCCGGCTCAGCAGCCACACCGACACCGGCAGCAACAACCACACCAGGTTCCGGT
ACAGCCCGTGCTGACAGTGTTAGGTTGATCTCTAACCGTGTGGGCCCAACGACCCACCGG
GCCTTGATCTATGCGCCCTGATCGGGGGCGTCCAACCCATTATGGTTGGTGGGCCCCTAT
GACCCACGCTATAAAAAGGACGGTGGGGGTGCCGGGGTACAAACTACGATATTCGTCGCC
GTCACACCTCTACCTACAGACCTATCCGATCTAGGTTTAGCGCGATGCTCATGGAAAGCT
CCACCCACGCTAGACCCTTCTTCTCCGTCACCGCCGTCGCTATCGCACTGATGGAGATCG
GCGGGAGCTCGGGCAGGTTGGGACAAGGTAAACCTACGGCAACTACCTTGACTCATCTAC
CCTAGTCGATCCAGGGGATCCATCAATGGTATCAAAGCCACTAGGATAAGATGTGTTTCG
GTTGAAAGAAACAAAAAAGAAAGATTTTCCCCTCCCTGAAAGCAGTGAAGATGGCCTCGG
GCCTCGTCGGCAAAGAAGCGCCGCCGCAAGG