morexGenes - Barley RNA-seq Database

Contig contig_166092

Source Contig contig_166092

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_166092 (2398 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_166092

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_24911	1	2220 bp	AK359368	Available	Available	None

CDS Structure of MLOC_24911

Contig Sequence (2398 bp)

>contig_166092 2398 assembly3_WGSMorex_rbca.fasta
ATTGACCTTAATCCCAAACCACATTAGTGCAACAGAAAAAAAAATGATACAATTTTTTTC
TTTTTTTTCTTTTTTCTGCACACATGATACAGTTTTTTTCTTTTTTTTCCAAACGGTTAA
CCCCCCACCTTTCCGAGGTAGGATGTCATGCTATTAGCTCAAATACTATATGATTTGATT
AAGAGGATGTGCAGAGCATAAGCAGCCACAACACAAGTAAGATAAACCTAAACCTATACA
CATATGACATATGACATATACAAACCATAACTTACATTAAGTGAGTGAGCAAAGATATTT
TTGCTGACTTGAATAAATGTTTTATTTTTGCAAGTGACCGAACATCACATCATACAAAAA
AATCAACAAAGCAACATATTTCTGCTAACCTGAGCCATACATGAAGGTGTAGAACGTGCA
TAAAACCAGTAAAGAAAATCATTTCAGACATAAAAAAGAAAATTGGTGCATGCATGCATG
TCTGGGTTCTTGTCACATAAAATTTTAGTTTTATCACTGGATCCAACTGAAATTGACGAC
CAACACAATAGTTCAACAGATCAAATCATATCAGATTACGATCGATAGAAACGAGCAGGA
CTTCCTTCAGTATGTTGGCAGCATAGAAAATCACATGGTGAGGGTGAGGTGTCATCGCAT
ACTTAAATACTAAGAATTAGAGGAGCTTAGCTCCATCATATTGTTGCAGTTTATTCCTCA
TAACTTGACCCTCACAAGCATAAGCATGCATGGACAACACAAGTACTCACCACTAACTAT
GGAGATAGGGAAACACAAAAGACGAATAAAAGCTAATGTCTGGCAATTATCTAGAAGAAA
ATACGTTTTTTTTGCTCAGGATATGAAACATCATCTCATCACCATAGTTTAGCGCAACAG
TGATGGGAAGCGCCATCACCATCACCACACCATCGCTGTCGCCCAAGTCTCCCTGCTGCA
TGGCCACCTAGTCGGGCACTGCAGGTCAAGGAGAAGGTACATCTCCTTCCTTCTCCTCTC
TGTCCTCACTTCCTCAAAACCATAGATCGATGCACGTTATAGATGAATTACTGATTACTC
CTAGCCTATACTGTCCATCGGCTATGACACAAGAGTCGATGCAGGTCAAGAGTCGATGCG
CTATGGCACAAGAAAATTTACACCATCGGCTATGTCTAGATTCCCTCAGGATGCTGTGGG
ACGCATACAACTGCACAAGTCTAACACAATCAGATGGTATTTATTTTCCTGATGCCATTC
CAAAATTTGTAGGTGACAAAGAGTGCGTTCAACTTCAGCAGAATTCAAAGCATAGAACAA
TACTGCACACTCTGGAAAACAAACACTAGGATTGTGTGGCTGCGGCTGAGCAAGTCATGT
CTGCACATTCTGAATCATCCTACTCTTAACATCACTGGAAAAGCACAAGTCTCTACCATG
CTGGGAACACATATGAATCACTGGAAAAGCACAAGTCTCTACAGAATCAAACTGGAGTGC
AAACTCGAGCAGTAAGTTGCTCATAACATATGTATAGTGGGCATAAGTTTTCAGTTTTAC
CCTTCAACCCTTTCTGCCCCATAGGACAACTTGCCTCCAGATGCTTATATTCGTTCGTCG
CCAACACAGCATCAAGAATTCTAGGAGTGCTAACAATGAACTCAACATACTTCATCTTGA
GCTGCAGGCAGTTGTGCTGCTCTGCTGAAGCCAGAGTTGTCACTGCATCAGATAAAACAT
CATCTCAGGCGGGTGAGCATCTACAAATGGCAGGAACGCATTGACACCAACGGGGCGAGA
AAGGCGAGCACGCCAGATTCGATCCGGCCCATGTTGTGCGTGCGCGCGAGGCGTTCGACG
AAATGCGTGGAAGGGAGATAAAGGGGAACAGCGGGGATACCTCGGCGTGGGTGGGGTGGA
GGAGGCGGTGCTGCTGCTGGTGGTAGGGCGAAGCAACGGAGGAGGAGCACGGGGATCGGA
GAAGAAGGGAGGTCAGCCGCCGCCTCAGCATCCCGACGCCGATCGCCCTCCCCTTGTTTC
CGGACGCCGTCCCAGACGAGGACCCTGCCGTCGGCAACGCCCGTGTACGGCACGCGGCCG
CACGGGTCGAAGGCGACGCTCTCAGGGCCCTGCATCTCGCCGCGGAACCGGATCTCCGCG
TCGTGCAGCCGCTCGCCCGCGTCCGCGTGCGGGTGCATCTCCGCCGCGTCCGGGAAGTCC
ATCAGGTGCGCCTCGAAGCCCGGGAAGTCCACCACGGATCGGAGGGAGGCGAGAGGAGGG
AGCGCGTGGGGCTGGGTGTCGGTGGGAGAGACGGAACGAGGGGGGGTCGGTCGATCTGGG
GAGGGAGAGGCCGAGGGGTAGGTGGGGCGAGCGGGTGCGTTGTGTGGGATGGGTGGCG