Contig Data
morexGenes
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Map Locations of contig_165952 (2163 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_165952

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24874 2 780 bp MLOC_24874.2 Available Available LOC_Os05g28210.1, FRAME:+1, EVALUE:3e-39, 13105.m02905 protein small hydrophilic plant seed protein, putative, expressed





CDS Structure of MLOC_24874






Contig Sequence (2163 bp)

>contig_165952 2163 assembly3_WGSMorex_rbca.fasta
TGTTCCTCGGTGCTCGATGATCTTCGATGGCACCAACTATGTTGAGTTTATGGGCTTCAT
GCGTATCCACATGCGTGGTCTTCTGCTATGGGGTGTCCTCTCTGGCGAGCTCCCCTGTCC
GCCATGCCCTGTATCAATCGGATCCCTCATATCATTTCTATACGTCTCGGTTGTTCGTGA
ATCCTCATGTATATCTTAAATATAGTGAGGATACAATGGCTCACAGATGCGTCCGGTCAG
TCCGTCACATAAGACACGATCCCACCTGGATCGTCTTTTTTTATTCATTCATTTTTTTCT
TTTTTTCTTTCAATCAATAACGTGTAAGTGACCGAACATATGAAAAAAAAAAATATAACT
ACTTGGACGGATAAATAGAAAATACGTCCGGTCATTGATTTTGCGGACGTTAAAAAAATC
ATATTTGCAATGTCAAATGTAGATGATGCATGGAATGCGCCGTGACCACGGGCCTAGGTG
ACGTGCCGACACACGACAATGCAGGACAACACAAGGTGTCACAGCTTTGTGTACTAGCTC
GTTCCGGTGGCTTCGTCAGTCCTCGGATAACCATGCCCTACGCGCGTGCGCGGGCATGTT
TCCATGCACGCTCGCATGTGTCGCCCCCAAGAGCCTCGCATGGGCGCGTCGACACCTCAG
AGGCACACGCGCCGGCACTCGGCGCCGTGACGCACCCTCCTCCGCCGCTATAAAAAGGCG
GCGCCATCGCTGCCTCCTCCATCACCAGCATCACGCAATCACAAACGCCGTTCAAGCAGC
CACACAACGCTTCAAGTTGAGATTCGTTCAAGTAGCAAGGCAGAAAGCAATGGCTTCCGG
TCAGCAGGAGAGGTCGCAGCTGGACCGCAAGGCCCGCGAGGGAGAGACCGTCGTCCCCGG
CGGCACCGGCGGGAAGAGCCTCGAGGCGCAGCAGAACCTCGCCGAAGGTACGTACGTGCA
CGCGTGAGAAATGTCCTTGTACTATGCTTGAGCGATCTGTGACTTACGATGCTGATTGCT
AGCGTTGTTGTACTACTGTATTTGTATGCTGCATTTGTGTGTGCAGGGCGCAGCCGTGGC
GGGCAGACACGCAGGGAGCAGATGGGGCAGGAGGGTTACAGCGAGATGGGGCGCAAAGGC
GGACTGAGCAGCAATGACGAGTCCGGCGGCGAGCGCGCTGCGAGGGAGGGCATCGACATC
GACGAGTCCAAGTTCAAGACTAAGTCCTAGATGATGAATCGACCAGTGCGTACGTAGCCT
AGCAAGCAAGACGACTCTGCTTAGGTCGGCCGTTGGTTTACCCTAGTGTCCATGCACCGA
ATAATGTAGTAGTTCAGGCGCACGTAGGCGATCGTACGTAGTATGGTCATGTGTGCTTCG
TAGAATCGTAGCTGGTAGTCAGTTGGTACTCTACGGTGAGTCGCGTCAGGTTAAGTCGGA
AGTGTGCTGTGGCTGGTACCCCACTGGGCTCAGTAGTGTCACAGTGTCCACTGACCACTG
TATCTTGTATTGCTCTTCGGTAATATAGTCGTCTTGCTCAAATCTGATGCCTTGTATGCT
CTGTGCTAATTGCTGCTGCTTCAGTGTTAGATCACCGGCCCGTTTCAACGAGGGACACAC
GGGGCACGCGGCACACCATAAGCAGCCACTGGGACCATCGAAATCTTTATCCCGGAGGGG
TAGTTGGTAGGCCGGCATTTTAGCATTTACGGATTACGTCGCATTGCCACACCAACAGAC
AAAATATCCGCTACTCCCTCCATTCCTCTATAAAAGCCACAAACTCATATTTAACAAGGT
AAAAATTAATGACTGTTTTGTAAATCAAATTTTCTTTTTCATTAACCAGGACCATTATTC
AAGAAAGGAATGAGAAGGAAAAAAACTATGTGTCATTATGACTACATGTAGTACTTATTA
AATACTCCCTCTGTTCCTTTTTATAAGGTGTATTTATTTTTTTATAAAATTTCACATGTA
AGGTGCATTTCTTCTAATTCTTTGTAATTTCATCATTAGCCCTTAAAAAAAGAAATCTCT
CCTCTGATTGCATGCATCTCTTATTATAAAGAGAAGAAGGAAAGAATCTCTCTCATGTGT
ATCTCTTACTTTCCTAGCCTAAATAATTTTATTGCCTCTAATCAATGATTTAGCCAAGGT
TAA