Contig Data
morexGenes
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Map Locations of contig_165838 (2524 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_165838

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24852 1 400 bp MLOC_24852.1 Available Available LOC_Os02g56130.1, FRAME:-3, EVALUE:3e-82, 13102.m06448 protein PCNA - Putative DNA replicative polymerase clamp, expressed





CDS Structure of MLOC_24852






Contig Sequence (2524 bp)

>contig_165838 2524 assembly3_WGSMorex_rbca.fasta
TCAAAACGTCATGGCTGAAATCAGCCCANCCCATTTCAATTGATCACATGGGCTAGTTTT
AATTTTTGGGGCTTTTTCTTATTGGGCTTCTTTTGGGGCCTTAGCCTATTTACACGCACT
TGTAGTATTTCTTTCGATTTCTTTTCATCAATATAATTTGGGCCCTAGCCTTTTAGTGCC
CAAATACATTTGGTCTAGTTCAGTTTTGGCTTTTTTTCATTTTTGAATTCAACAACTTTT
TTTTCTTTTATGTTGTTCATGGATCTATAAATAAGAGCCCATACAACTTTGAAACCTATA
CATATAAAATCTGAAGCATCTCTAAATGACAGCCCACACCACAAAATTTGAAGCACATTT
CAAGATCTGATAATGTAGCCAAATCATGTAGCACAACCAAAATCTGCTAAACCTGTAGCA
CAATCTGGTACAAAATTACACAACCAAGTGCACAAAATCTGCTACCAAACCAAGTGCTAT
CACAAAATTTGTTATCAAGTGCACAAAAACTACTACCAGAATGGTTCCTAAAGATGGTTC
TTTCTTTGCCATTCTGCGGATGGGCCTTTTCTTGGGTTGTTTCATCTCCGCTTCAGCATC
TTCAGGACGACGGCTGGTGTGTAATTATCCAATGTACCCTTTGTCCTCCATCTTGTCCCA
CACGCGTTGTAGAGAACTGGCTTCTCCGGTGGCCCATGTCGCCAAAGAGGACTCCCTTTA
TCAGCAACAGCAACAGTTTCCATGAGCAAGAAGAAGTACAGTACCAAACAGACAGCCAAG
AATCTGTGTAATATTGTTTATTGGTAGTGGTCCATGAGGACAGGAGCTTGCACCACAAAG
ATTTAGAATTTTGAGGCAGTAAGATCATCACATACATAGTCAAACTGCATACTTCTTTTA
GGTATTGTTTGTTTTTCAACTATTGTACAAGATGAGGCCTATCAAACTGCATACATAGTT
GCTGCTCAGAGCGCATACTTCTTTCAGGTATTGTTTGTTTTCAACTGCATACATAGTTCA
AGTTCATAACCATCCAATCTAAGCTACAATGTTGTGTGTTTGTAAAAATAAGGATTGATT
CACTACCCACACAATAAGCTAGCCCAAATGTCCTAGCAGAGAGACTAGCACAGGCCAGCT
TATAGCATGAAGCACATGAGGCTACTAATTGCAGACCATACATTTCAGACATCCTACTGT
TTAGGAGATGAACTTAACAACAGAAAACCATGGCAATCAACAACCCTAGCTAATAATAAA
AATTAAACTATATACTACCAGAGTGGATATGAACTGCTACTACTGATATGTGAAGTATCA
GCACCATAACTAGTTAAATCTAACACATAGTCATCTACCAACCAATAGTATGGAACAACA
AGAAAAGAGGGAGAGTCGAGTTTATACCTGAGAGAACCTGTCGTCCTTGTGGTCCTTCTT
CCTGTTGAGGAACCAGTCCGGCACCTTGAACTGGCGCGAGTTGGCCACCACTGTCATCAG
CCGATCCATCTCCTCCGAGGAAAGCTCTCCGGCCCTAAACCCCCGCATGACACAACACAC
GAAGAGGAGACTGCCATTTTAGTCTATGCAAGGGAAAAAATAGTAGGGTAGTGTGTATCT
ATGAACTGCAAATAAGACATTTTAGGCTAATTATCTTAAGTAAAGGACAACATCAACAGT
AGCTACCAAATCGTCCAAATATTATAACTCAGTAACCACTAAATGGTCTGTTTGAGAATT
AGGTGTGACTATCTATTCCTATTGCTAAAATTAAGGTATTCATAAAATACAAGCATAACT
ACAAATGAGATTCCAAATTCTTGTTATGCAATACACCCCAAAAATTTCACAATATATATG
CCTACAAGGACAATATATCCATAGTAACTAGTGGAGAAACAACACAAGAAAGATACCTTA
TCAACAGTCTTGTTCCAGCAGTGGAGAACTTGACACCCTCCTTGGTGACAGAGATAATAA
CTGCAACGCACATAACAGAAGATGCCATCAGACAAGCGAGAAACAGAGATCACAAGCGCA
GTAGAATAAAAATTAGAGTAGATGATGTACATGAGCATACCGGTGTCGCTGATCCTGCTG
AGGTCCTTGCAGATCCTGGAGAACTCGGAGGACGGCATGCAGACGATGGCCTGGTACTCC
GAGTCGGGGATGCCGAGGTGCTCGTTGTCGATGTCCATGAGTTTCATCTCAAAGTCGGCA
ATCTTATCCTGATCTGTCCATCCATCCATCCATCCACATCGTGGTCACCGACGTAACCAC
GAGGACCAAAGGGGAGAAAACAGATCGAGCAGGGGGGTTCGCTTACTCGGCGACTCGAAC
ATGAAGGTGACGGTGTCGGAGCCGTCGTCGGCCTTGATGGTGATGATGTCGTCGTTGCCT
GCGTAGTGGAGCATCTTGGCCATGTTGCCGAGGTTCATGCCCATGGAGAGGTTGCGGTCG
CAGCGGTAGTGCTCGAAGCCCTCGGAGCGGAGGAGGAGGGCGACGAGCGCGACGTGGGAG
GAGT