Contig Data
morexGenes
Links



Map Locations of contig_165169 (3372 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_165169

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24707 1 571 bp AK366321 Available Available None
MLOC_24706 1 150 bp None Available Available None





CDS Structure of MLOC_24707






CDS Structure of MLOC_24706






Contig Sequence (3372 bp)

>contig_165169 3372 assembly3_WGSMorex_rbca.fasta
TATCTTGTGCATTGGGATTCCGGTAAGACTTTGGGTGTTCTCAGAGTTGAGGTTTTCCAC
TAAGGAATCTGATGAGATCGCGAGTTTCATGATCAAGGATTTCTATGCGGCCCGTGGTAA
TTTGTGACGGATTAGTTGGAGCACCCGTGCTAGGTTAAATCTTTCGGAAAGTCGTGCCCG
TGGTGATGTGGCAAACATGGATACTTTGTTCACATGTGGTTCTAGATAACTTGAAGTATC
TTAACTAAAATCGCCAACTTTGTGCGTAACCGTGACTATATCCTTCAGGGTTCCTTCTCT
GATCGAGAACGCGGTGGCGTTATGAATGACGTAAGTAGGTGTTCNNNNNCACTTAGTGAT
CATTCTTAGTTGCGACCGTCATGCAAAGACCACTAAATTACATCTTGTTCTACGTAAGTT
ATCCACCATAAATGCTTAGAGTTCGTGGAAACTCAAACACATACCCCTTCCTTACCCAAC
AACTTAGTTAGATTCGATGGAATGGTCATGAGATTGTCGAGTCCTCGTGGCTCACAGATT
ACTACAACCACCCACATGTACATGTACCGCAGACACAGATGCATTCGAGGATAACCAGCT
GAACTGGGAGTTTGACGAGGACAGTGTACGGATGTACGTGACGTACCACGAGGACTAGAG
GCACTTTGTCGTGATCGTGGGCCTAGCAAGGTGGGGTAACATTAGCTTTTGTCGTTTATT
TTGTCCGTAATCGGACCCTGTTTTATATTTGAATAATGAATGACTCTATGGATTTATTAT
TTAGCTTCTCACGAGTGTAATCTAAATCTTATTACTATTCCATCTATTATTTATTGCATT
GTTTATCCTGCTTGCGAAACGCTTAGATGTGACTCCTTCCCCTTTTGAGGCCTCGCCCCC
AAATAAGGAAAGTGTCGCATCATAGATGTTACACGAACCTCGGTAAAACACCATCTCCGT
CGTATCTTGTTACCATCAACCTTAGATACACAGTTCGAACCCCCTACTTGAGATTGGCCG
ATTTTGACACCGACAATTGGTTCCCAAGCCAAAGGAGAACCACAATGTCATTGGAACCAA
ATGGATCTTAAAGAATAAGCAAGATGCGAACAAACAGATTTTCGCGTTCGATAGTGTTGT
GTTGCATGCCGATCCCGCCGGTCACTTAGATCAGATCGTAAGTCTTGCCCTAATCAAGAT
ATTCGGTCCGGGAACTTGGAGTTCGTCGCTGATCCCCAGGGAGACCTTATTTTTACAACA
TCCCTCCCTAATGATGCTTCAACATCAAAGGGTGAGGATTTCATCCTTGAGACGGCTCAT
GCTTAGGCTCCGGTCTCGGATCCTGTTGAGGATATAGCTCACCGTATGACCCGGCTAGAA
GGTTTGATCCGGCCAGGAGGTTTCACCCGGTCATGAAGTATGACTCGACCCATCAGCTAG
TGACTCGTAGGCTACCCCGCTCACCGGATCTACCTAGACGACGAAGACCAAGGCCTAGTG
TGCAAGTCGGCGCAAGGCGGCTCATGAAGACGGACCAAGAAGATGAGGAAATCCTTCCAA
GAGAAACTAGTCCTAGTCCTAGTAGAAATCTATGTAAAACCTACCCCTTCAACTTATATA
AGCAGGGGCAGGGCCCCTAAGAGGGAAAAGTCAACTAAAATTAGGTCTAGCCAAGACAAA
TCATGAGAGAGACAGATTAGACACCCTCAAGATTAGAGTTATCGATTCTACACCCTTGTA
ATCGAATTCATCATCATCATCAATGAAACACAAGTAGAACGTAGGCTTTTACCTCCATCG
GAGGGGTCGAACCTGGGTAAACTTCGCGTCTCTCGATTCCAATCAACTCCTCTAAAGTTA
CCACATAGTGTGATGACCTCATACCTAAGTCCTTCATGAGGACATTTGTCGTGACAAAAC
CATGACAGTTGGCATCCACTGTGGGTTTTCGCACGGTGGTGTTGTGTTCTTAAAGGAATC
TCCTAGGGATCGAGAAGCGTATGATCCCCAGATTAGAAAGAGTCGGCACAAAGAATCTTC
ATCAACTACAAGTTCATTGATCAAGATTGGAAAAGTTTTAGCATCGACGTAAAAAAGCAT
GAGGCACGGTAAAAAGAGAATTAGGGTTGTGCGCCTGTGCGGCACCGCAAGTCGCCAAGG
CTGACAATTTATCCTCATCAACGCCGATATAACGAGTCTCTACCATGGACGCACGAGGCA
GGCAACTGCAGATGGCGCTAGAAGGAGGGCACAACAAGTGTGATCAATTGGGCACGTTCA
GATTTCTTTATCCCGTCTACAATCGGAAGCCGGCTAGAAAGTACCGTCACGTACGGCAAG
AGTCTCCCCTAATAATAAAGCATGGAACGCTTCTGTCGTAAGTCATTGGCACTTTTTGCA
CAAAAGCCCCTCCATTTTTGGGTATTCAACCCGCAGTCCCTCTGTAAGTCGATCTGTCCT
ATTCGCACGAGAACATGACGGTTCCTCTGCCGCGCCCCCATCCATCCTATCCAGCAGAAT
CAGCCGCATCTCGAGCTCCCTCGATGGCGCGCGCCTTCAATGTTCCGGACATCAGCGGCC
ACCTCCGTGGGCTCGGGGGGCTTGGATGGCTGCTGTTGCTGCTGCTTGTGGTGGGAGAGG
AGGTCGTCGTCGCCACCGAGGCTGGCGCGGGAGAGCTCCTTCTTGTTCTGCTTCCGCATC
TCCCGGATCTTGGAGAAGTCCATGGAGTAGTACGGCATGGCGCCGTTCTTCATGTCCCAG
TCCCCGAACGCCGGCACCGTCATCCACGTCGTCGCCCCCTCCCCCTGCACGCACGCACGC
ATCGGAATCTTCCATCAAGCCTCGGCACAACTAGATCACGAAAAAAGGAAAGAAAATCCA
TGGACGGATGGACAACAGGAGGATTTGATCTCCCCGCAAGGATTCGTTGGGTGGGGATGG
GAATTGGGCTCACCTCCTTGTGGCTGTCCTTCTCCATGGATGATCTGGCTGTCGGAGACG
CACGGATATTATCCTCCTCCTGCTGCTGCTGGAGCCGTGGAGCAGATTTGGAAGCTAAGC
TAAGCTAGGCGAAAAGGCGAGCTAGATGGAGCACCACAGCACAGTGCGGGTCGAGGACGA
CGCGGCCGTCAGAGAGCATGCCGGTGGGGTGGTGGAAGAAGGCGCGCCCCTCCGACGGCG
CGATGCGGATCCCCATTATCGCCGCCACCCCGCCCGTGTCCGAGTTGGAGTCACCGAAGT
TGAACACCACCACCTCCTTCCGCTTCGTCGCCACCTTCGCCGCCGCCTTCGTGGGCGCCT
GCGCCATCCCCTTGCTCTTCCGGTGCTCGCCGGCCCCGACGGGCGCCGGCGCGCGGGCGC
GGGCGGGGGGGG