Contig Data
morexGenes
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Map Locations of contig_1648380 (878 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_1648380

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24593 1 860 bp MLOC_24593.1 Available Available LOC_Os08g10540.1, FRAME:+2, EVALUE:1e-45, 13108.m01124 protein retrotransposon protein, putative, unclassified





CDS Structure of MLOC_24593






Contig Sequence (878 bp)

>contig_1648380 878 assembly3_WGSMorex_rbca.fasta
ACGAAGTTATTACGCGTGTGTGTGTGTGTGTGTGTGTCCCTCCTTTCTGGAGGTTGTACC
CCCGATGTCTTCTTCCTGTTCAATGCAATGAAACGCAAATTCTTTTGCGATTTCTCGAAA
AAAGTATCAAAGGAAAATACATTCTCCAACTTACTCTAAATGATAAGAAGACCACCTGGG
GTTTATTGGTGGCATATGGTTCTTCTCATGAGTTCAAGGAGGAATTTCTTGTTGAGCTTG
CTGCTATGTGTAGTAATATGCAAGTTCCTTACATTGTAGGAGATGACTTTAATATACTTA
GACATTCTGGTGAGAAAAACAAAAAAATTGCGAACCGCAAATCATCGGATCTGTTCAACT
CGGTCATTAATACCCTGGCTTTGCGAGAGATCCATATTAGCGGGGGTCAATACACTTGGA
CTAATAACCAGGCCCACCCCACTCTTGAAAAACTAGATCGTATCCTGATGTCTGAGACAC
AGGAAGACGTCTTCCCGCTGGTATCTGTTAGGAAGCTGGTTCGTGAAATTTCTGACCGTA
ACCCCTTGTTACTTTATTCGGGTGAGGAGGGGCGAGATACTCCCAAACCTCGTGAATTCC
GATTTGATCTTTCTTGGATCAAAGAGGAAAATTTTCTACCTGCTGTTAGCAAGATCTGGG
CCAGATCGGTGCGGTCTGCTGACCCCATAGATATCCTGAATATCAAGTTGAAGAGGATCA
AAACCTACTTCAAAGGATGGGGCTCAGATAGATTTGGGCATGACAAGAAAAGAAAAGAGG
AACTCAGAGTTGAGTTAGCTCCCCAGGAGGAGCTGGAAGAGGATGGACCCCTGTCACCTG
ATCTTTATGCAGGGCCGGCCCTGAGGGGGGGCAGGGGG