Map Locations of contig_164824 (3512 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_164824

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24585 2 1000 bp None Available Available None
MLOC_24584 1 944 bp MLOC_24584.1 Available Available None





CDS Structure of MLOC_24585






CDS Structure of MLOC_24584






Contig Sequence (3512 bp)

>contig_164824 3512 assembly3_WGSMorex_rbca.fasta
ATGCATGTCAAATAATTAACCCACAGATACTTNNNNNNNNNNNNNNNNATCTAGGTGATA
TTAGGGTTGATTGACATGTATCGTAGGTGTTATTCTAGTATGAACTATAGGGTTGTTTGT
GACACTTATAGAAATAGCTCAATCAGAAAGGATAACTTTGAGGTGGTTCGCTGCCCATAA
CAATTTCTTCTTATGTTCTCCGCTAATAGGAACTTTGAAGTGATTCTTTATCGCACATTG
AGGGATGATCATATTTTCTATTATGTTAGCATTGTTGAGNNNNNNNNNNNNNNNNNNNAT
GAACCCTAGGCCTTATTTCCAATCGTTTATATAACGTTTTGCTCGATGTCTACTACTTGC
TACCTCGTTATTTTTATTTATTCATATTATAAAAATCTATTATCCATACTATACTTGTAT
CACCGTCTCTTTGCCGAACTAGTGCACCTANNNNNNNNGCCATTGTATTGGGTGTGTTGG
GAGACACGAGATTTCCTGTATTTGATTGGAGGGTTATTTTAAAGAGACCATCTTCATCCT
ACACCTNNNNNNNNNNNATAAACCTTAGGTCATCCACTTGAAAGAAATTTCTTGTTGTCC
TACAAAACTCTGCACTTGGAGGCCTAACAATGTCTACAAGAATAAAGTTGCATATATACA
TCAACATGCCACTCCAACCCTATAATTTTCCTATTCCTACGTTTTCAAAATCCTACGAAT
CAAAGAGGCCCTAAAGGGTTGCATTACCCTCTACTCCTCCCCATGAACCCACCTCCTCCC
ACACGATCCCCTCCTCGCCATCTAACTTTGCCACCTCCACGATTCCCTCCTCCTCATTTA
GCAACACCACGATTGGCTCCCTCTGCCTTCCCGTGATTCCTTCCTCCTCGTCCAGTACGA
CCACATCCCCGCCATGCGAGTCGTCTGTCCGCTAGGAGCCCATGTCGAAGAGGATGGACC
GTTGAAGCCGCTGGCGAGGAGTACACTCCGGATTTCTATGCCATACATTCCTTCTCCATC
AAGCTCCACATGCAGATCCTATGAGGTTAGGGTTATTAGTCCATCTTTGTCCTTTGATCT
TTTCTTGCTTTAGTAAGTAACTGAAGTAAAAAATGTATTACTAATCTAATCTAGGATTCA
CTCAAACTTCCCCACCTGCACATCTAATATCCAAACCAACACCCTCTGGACAAGTTACAC
AAGTGAGGGTTTATCTATTATTGATCTCTTTAATAGTTAATGCAAATAGATCAATACTAG
TTTCACTTAGTGTATGCCAATGAACAAGAGCAGTACCTAACCTTGCTTTAATTCGCTAGG
GTTCGGTTTTGTTCTTCTTTAGATGGTGGTGTTTTACTAGTAGAAAAACTTGAGCTTCTT
TATTTTAATTCTTGTCAAGAAGTTGCAGTTTTGTTGACTAAAATATTGTTAGTAAATTAA
TACATGATTCTAGTAAATATTCATAGATAAAGCATCAATACTTGAAGACCTGGGTGATTC
TAGGTAGGCATGTAGCTAGTTAAAAATTAGGCGGTTCTAGGACATATGTGTTATATAGAT
CAATTGTATGAGCTCACTAAAAAACTCTCTGGTGATTGCTATTTTTCAAGACCTTGTTTT
TGCAAGCTACTAGACAAGGGAGCAATAGATCTTCCCTTTCCAATACAACTCTCATCCTTT
GTCATAGACCAAACAAGACATAGGTAAACCCGCAAACCTTGAGACCGTTTAACTAGCTTA
TATATTTGCTTAATGGTCAGTTCCTTGTGGGTATTTTCGTCCATGTTTAACTAGTTGAGA
TTGTTTTCTCTTCAACCAATGGTTAATATGTATTACAACTGTGTTGTTATTATCTTGCGT
GTTAAGCTTAATTGTTCATTTGCAGTCTGAACTAGTATGTATCATTACATGTTTGGTCCA
TGTTTGGAAAGAAAATAATATAAACTTAATTAGGTGCCATTTCCTTATGCTTATATCGTG
TATTGTACTTTTTAGTTATGGCGTCTTCCACGAGACGTGGAAGGACAAACGTAGCATTTT
TAATCTCACGAATACCATTATGATTGCATACTATTATGCATGGGTGTGTTTGCATTACCT
TATGTGAGAAAATATTTGCAAATAGAAATGAGAGTTAAACTAGAGAGCTAAGAGAATGCC
ACTTGTATCAACTAATTGGTGAGAGTGGCGTTGTGTGTATAAATCAACTTTGTCTAGATA
GAAGAACGTTTCATATACTAGATGACCCGTTGCGCCCATGGCGCAAAAAACATTGGCAAG
CCAAGCATTGTAAGCATGTGTATGTGACAGTCTAATAGATATATATTTTTATCTATATAT
ATTTTTATCTGACTACATGGCATCATGATTCATTAAAAGGAAATAATGGCATTACTTGAT
AACTGCATACCATAAGTAAATATAATTTTAGTGCTGACATAGTGTTATAAGAGAACTCAG
TGTTGATACACAGCGTTCTAAGAAGTTTACAATGAGCATAAGTAGAAATACAGTGTTGCT
ATATACTGTTGTAAATTGATAATAGATTATTTACAATGAGCATAGTATATAGCCGGTAGG
TATCATGTAGATGGTTGTGGTTATGAGGTGATGGTCATCAAGGAGAGCCATAAGCCATAA
GTTTCCTACGCACTCAATTCTGGAACAGGAAAACATAAGCTTCAGTGGCAAACAAATAGA
ATTTGAAAACTGTGTATATATACAGAGAAAATAAAAATAAGAATGCAATTGAAAGGTAGA
ATCACTTACCTAGTTGCTGGAGGTGCGCACCCATGCTTGCCAGATTCGTCGCCGGGCATG
TGGTCTTCGGGGGAAAGTGGTGCCCATGATGCCGGAGTAGCCGAGCCGCTTGTGGTTGCT
TCCTGGTGGGTGGGGTCTGCTGTCAAATGAATCATCAAGCACTAACCAAGGAGGCCAAAT
AAGAAAGCATCTGCATGCTACAGAGTTGTGTACTGTGTTGAGTACCTCCATATGTGCAAA
CAAAGCAAACTGGAACAATATAACCTTGACAAACATGATACATGATGCGGGGAGAAGTGT
GTATCCTTTCCACAAGAACAATGGAGCTTAAAAATGAGATGGAAATGCTGATAAGTTGAC
ACTTAACAGAATCATGGAATTTGCTTTCCAATTTATATCATTGTAAATGCTACATTCCTC
AATGGAGTATGCACTTCCAAAAATGAAGTTGACAATTAAAGCACGCATCAATGGCTTAAC
ACTGCTGCAAAAATGGGTCAGACATGCTGCAAATTCCTGCACAAAAGGCGACCCTCTACT
CAGTTTTTATATATTCAGGTTCTGAACAAAGTTAATACACAAACCAACTGAGACCATCAG
TTTCAAGCTTACTCGAAGTAAGAAAACAGCTCATGAATAATATCTCTTACAATATATCTT
AACTAAATTTTGTATGCTCTATATATGTACCATATCGTCTGAATACAATCTTAACTAAAT
TTTGTATGCACTATATATACATTTTTGCTCTG