Contig Data
morexGenes
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Map Locations of contig_1640861 (5377 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1640861

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24253 2 2178 bp MLOC_24253.1 Available Available LOC_Os03g12140.1, FRAME:+2, EVALUE:0.0, 13103.m01380 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed





CDS Structure of MLOC_24253






Contig Sequence (5377 bp)

>contig_1640861 5377 assembly3_WGSMorex_rbca.fasta
CGTGTGTCTACCCCCGCTATATATGAGAGGCCTAGGATATAAGTGTCCTGTTTGGNNNNN
NNNNNNNTCCTATCTAAACACAATACAACTCAGAGTCCAACTATAACCTACCGTGTACAC
AATATTCGACACAACTCTAACACTTTTTAGTCTACGTGGATTCATCGGATAACAGCAATG
TGGTGCCGCCATTATACATGCCCTAGGGATGTCATGAACTCGTAGACTCGAAAGTATAGA
AAATTACTACCCCCGGTTCGTAAATATAAGTATTTTTAGATATTTCACTAGAGAACTACA
TACGAAATAAAATAAATGAATGTCTATATAATCTGCATGTACCTTTCTATTAAAAACTCT
TAAAAGTCTTATATTTAGAAACGGAGGAGTATTATACAGTGCCATAAACAACGAACACCT
CCACTTGGCCGTATATTCCCTTGGTCATAGGGAGAAACAAACTTCCACCGGTGCACGCGA
CATGCCTCAGGTCAAATTTAACGACCCCATTCGCAACCTTCAAGCATCGTATCAGCAAAG
CACGCAAGCAAAAAAGAAATTGAAAGGAGCCCTGCGTACCAGCAGCCGATGGTACAGCTA
CGGTCATGTCGGCTGTCGCCGAGGCGGCCTGTCTCTGCGGACATGCAAATACGACCGTTG
GGGTCCGAAAGCCGAAGAAGCAAGCGTGCGTGCGTGCACCGCGCGGCGCACCCAATCCTC
TCCGCCTCCAGCCCAGAGCCGAGCCACATGGCGGAGTCGCGAGTTTTTGACCGTTGCTCC
GCCACGCCGAAGACCTCCTCCACTGTCCACTCCTCGTATGGTGCGCCCACCTGTCTGCGC
CACTGTCCGATCGCCTGGTGTCCCGCTGCAGCTGACACGCGGGTCCGCCCCGCCGGCCCA
CACGTCGGTGAGCAGGCAGCGCTTTACTGTGGCTTGTTCGTATCTTTCCCGTTGTCCCAA
GCAGGCGGGATGCTGCGACGCGCAGGCGCAGCTGGGGAAGCGGCGCAGAGATGGCCGGTA
CGGTGCCGCGGGACCAGGCGTTCCCGAGGGTCCACATCTCAGTCGAACATACGTACGCGA
GGGTCAGCGCCGAGCGGGTGCACGAGAGGAAAACCCGCGCGAAACACCGCCTCTTGGCTC
CCCGAGATCGCATCGCAGCCGTCGGATGTCTGACATGCGCCATGTGATCCGTGCTGCTTA
ACCGTAGGGCTGTCTCCCGAAAGATGCCTTCCTTGCTGACATGCGGGCCGTCCAAAGGTG
GTGGGCGCAGCTGTCAGTGACGGGCGAGGCACCGGGAAGGAGTGAGTAGTCGCACGAAGC
AACGGATCCATTGGTGGGCTCCCCCTCCCATTGGGCTGCGTCCCCCACTTTTGCACAAAA
GCCCCTCCTTTTCTGCGTCCTCATATTAATAGGCCCACTCGCCACGCCTCTCCCGTCCTC
TCCAGCTTCTCTTCTTCCTCTCGGCCTCTTTCTCCCCTCCTCATCCCCTTCCACTTCTTC
GGCTTCTTCCTCCTCTTCATTTCACTTCTTCGGCTTGCTCTTCTTGCCCAAGTTACCATC
CTTCGAGTTAGGCAGTCTGGATCTTGCAGAAAAGGTGTAGCTAGCTAGGATCCTTTTGCT
TCCTCCGAGCTGGGAGAGAGAAAACAGAGCGGAGAAGAGAGAGAGAGATACACGGGTACC
GGAGGTTGACCGAGCCAAAGTGGTTTGGAGCTCCTGGCTGGGCCTTTTTCTTTTGGCGAC
GACATGGCGAAGATCCACTTCTACCTCCTCTTGCTGCTGGCCGCCGCCGAAGCTATTCAC
GCTGAAGATGGTGAGCTTGTTTCTTCGCTTCTTCTTATTCCTGTATGTATGTATATTGCT
GTACACCATGCTTGCTCTTCCATCTCGGACGATCTCCGTGCTGCTGCAGTGTTGATTCGA
CATTACGGACTAGGCTAGGCTGGTTTTTATCTTTTTTACAGCAACCCTGGGAACCCGGCT
GATTGTGATTGAGACTAGTCGAACTAGTGCCGTCCCTTTCTCTTGGATTTTTTTCCTTTG
TCGTCTTATGATCCGGTGTGTTTCTGGCTTGTCCTGCTGGGAATGTTCAGCCATCAGCTT
TCTCTTAACACCAGATCAATTCTTTGAGCTATTTTTTTGACGTGATTCTTTGAGCTATTG
ATAGGAGTAGTATGTGATACTGTATACGGGCAAATCAAGCGGTATCTTTCGGGGTTTGGA
TTTGACTACTCGTCCTGCTCGGCCTATTCTGTGCTTGCCCACCGGGTCTCCCTGGGATTC
CCTTCTCCGGGCTTTTCCAGCCCGTGTATTCCTTGCCCATTTCACGTGCAACGGACTAGT
TTTTATACAAGTTATGCACGTTCCATAAGAACATCTGGTCTTGTTATCATTACATATTCT
ATCAATAGGGGCTTAGAATAAGATTTGCTTGGAGCTAGGGCAAGGAATATTACCAGTAGC
ATCAAACGGCCACACCCCTTGCTAATCTACCTACACGTACTAAAATAATGTATAGTAGTA
ACCAAGAACCAACCCCGGCATCCCATGAATCTGTGATGCCGTGATGGCTTTGTGCACATA
AGTTTAAGCAGAAAGAGACGGTGGCCGCTGAGCTCGTACGGCGGCCCATGCTTAGCGTCA
GCCTTTGTGGGCCCACCATGTCCTCCTCTTTCCTTCTCCCCGCCGGTAGTTAATTTACCC
ACAGGATCGTCGTGATGTTTCAACATTGGGTTACTGCCAAGGTTTTCTTGAGCCGGGCAC
CGTGTCTGTCGGTGGGCGTCCATCGTGGTCAAGCAGTAGGATCTCATGGTCAATCCACTG
AGTAGGGGTTGGTGTGATCATCAGGGTTAACCGGTGTAAATGACTCAGTAATTATGTCAC
GGATCACATGCCGATTGCGACAAGATACTGCTCATTACAGTACCCTGAGCGTGCACAGCA
CCGTCCAGTTCTACCCGTTTGACTGTGAAAGGAAAAGATGATGTTCATGGGGACCACCTG
GCATTGTGTCGTAGTACTGGCCAGCGGGCCCTGCGTAGCTAATGAAGTCGCGTCCATGGC
GTACTACGCGACACAGGCACACAGACTATCTTTGCTTGCCTTGTGTGCGGTGCACTGCAC
CCACGAGAGCCCGGGGTTGCGCGGATGGCCGCACGAAAGACCAAAGCCACAGTGTTGGGC
TGTTGTTCCCAACGTCTCGCCCCATACCCAGTTTGTGCTTTACAGCTAGCTGTGTGCCCC
CTACCAAATGTCCCATGCTCATTTTCCGCAATATGAAAACCTGGAGTGGCTTGTTTTCAG
CTTTATAAAACACTCCTCTCTTCTCTTTTTGTACTCGTCAATTTATTACTGTTTTATTCA
TGACACTTTAGCATCGGCATCACGCATGTCTGTGCAATTAGTATATGTTCCAACAAAGAT
TCCTGCTCTATTATGCACTTTGTTCTCTCACCTAAACTAAAACACGGAGAATGTATTTGC
ATCTCACGGTAACAGATCCATGCCGCACGGAGAATGTCTGAACTTTTTTTTTCTTTGGCG
TGCAGGGGCGTACATCGGCGTCAACATCGGCACGGCCATGTCATCGGTGCCGGCTGCCAC
GCAGATCACGACGCTGCTCCGCTCGCAGAACATCCGGCACATCCGCCTTTACGACGCCGA
CCCGGGGATGCTGTCGGCGCTGGCCAACACCGGCATCCGCGTCATCATCTCCGTCCCCAA
CGAGCAGCTCCTCGCCATCGGCAACTCCAACGCCACGGCGGCCAAGTGGGTGGCGCGGAA
CGTGGCGGCACACTACCCGTCCGTGAACATCACGGCCATCGCGGTCGGCTCCGAGGTGCT
CTCCACGCTCCCCAACGCCGCGCCGCTCATCATGCCCGCCATGCGCTACCTCCAGAACGC
GCTCGTGGCCGCGGCGCTCGACAAGTACATCAAGATCTCCACGCCGCACTCCTCCTCCAT
CATCCTCGACTCCTTCCCGCCGTCGCAGGCCTTCTTCAACCGCTCGCTGGACCCCGTGAT
CGTGCCGATGCTCAAGTTCCTGCAGTCCACCGGCGCGCCCCTCATGCTCAACGTCTACCC
CTACTACGACTACATGCGCTCCAACGGCGTCATCCCGCTGGACTACGCGCTGTTCCGGCC
GCTGCCGCCCAACAAGGAGGCCGTAGACGCCAACACCCTGCTGCACTACACCAACGTCTT
CGACGCCGTCGTCGACGCCGCCTACTTCGCCATGGCGTACCTCAACGTCACCAACGTGCC
GGTCATGGTGACAGAGACCGGGTGGCCGCACAAGGGCGACGCCTCCGCCGAGCCGGACGC
CAACAACGACAACGCCGACACGTACAACAGCAACCTCATCCGGCACGTCATGAACGTCAC
CGGCACCCCGAAGCACCCTGGGGTGGCCGTGCCGACCTTCATCTACGAGCTGTACGACGA
GGACACCCGCCCCGGGACGGCGTCCGAGAAGTACTGGGGCCTGTTCGACATGAACGGCAT
CCCGGCGTACGCGCTGCACCTGACGGGCTCCGGCGTGCTGCTAGCCAACGACACGACGAA
CCAGACATACTGCGTGGCGCGGGAGGGCGCGGACGAGAAGATGCTGCAGGCCGCGCTCGA
CTGGGCGTGTGGCCCGGGGAAGGTGGACTGCTCTGTGCTGACGCAGGGGAAGCCGTGCTA
TGACCCGGACACCGTGGAGGATCATGCCACGTACGCGTTCAATGCCTACTACCATGGGAT
GGGGATGGGCTCGGGGACGTGCTACTTCTCCGGAGTCGCCGTGATCACGACCACCGATCC
GAGTAAGCTCAACAGTCATCTGCAGATACTTCCTTGCCTTGCCTGTTCTTTCGCATCTTG
GACTCATGTCGCTGGAACTTCCCATTTCTTCTGCAGGCCATGGATCTTGTGTTTATGGTG
GGAAGAACGGCAGCGCGTTGCTGAACGGAACCTCGCTGGCGCCGTCGTCCAACTCCACCA
CGGACTCCGGCTCCTGGCGGGCAGCCGGCGACGTCAGGTCGTTCGTCCGGATCGTCGTCA
CCGCGCTGCTCTTGAGCGCCGTCGCCCTGTTGTAGGATGTGAGTAGTAGGAAGTCAGGCA
GAGGCAGCAGAGTAGGGAAGCCGTGCTATTAGTGACGTGAGAGATTCTTTTTTCGTTGTC
AAGTAGAATTGGCCTCGGTGCTGTTGGGTGGCAAGTGTCTTTCCAAATGGAACGGGATGT
GGTTATGTTGGCTCTTAAGATCCGAGCTCGTACTCTGGTATTGGTTGGGAATTTGGGATT
GTATTGGATGTTTGGATCATTGGATGGATGTCATCTGCTGGTGGAGGAGGAACATTTAAG
AAGAACATCTTCAATGGTGATCTTCAAATTTCTTCTG