Contig Data
morexGenes
Links



Map Locations of contig_163992 (3806 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_163992

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24214 1 485 bp AK252598.1 Available Available None





CDS Structure of MLOC_24214






Contig Sequence (3806 bp)

>contig_163992 3806 assembly3_WGSMorex_rbca.fasta
TTGTTCGCGGGGTGGATCGAGGGACGTGAGGACGTTCCACTACATCAACCGCGTTCACTA
ACGCTTCTCGTATACGGTCTACAAGGGTACGTAGANNNNNNNNNNNNNNNNNNNNNNNNN
NATCACCATGATAGGTCTTCGTGCTGTAGGAAATTTTTTTTGTTTCCCAGGCGACGTTCC
CCAACAACTTAAGAGGTCTCATGTGGTGCAGAATGCATTTGGGTTCAGATAGCTCAAGTT
GGCCACAGAAAAGGGGCTCCACAATGGTGTGTGGTGCCTCCTGCAACCATAAAATCACAA
ACAACAATGCTTTCAATCACCAATATACTTGAACATCGAATTTATCCGTAACACTATATG
AATCCCCAAATCAGCAAGAACCCTAACATTGTACAAAGATGAACCCTAACTAAGCTAAAT
CCTACAACCAAGCCCCACCCTCCCTAAACAATATCCATGTCACAGACACAACAAAATACC
TAAACCCTAACCCTGGGTGGCAAGGAACAAAGCAAGATCCATGGCATTTATCCCTAACCC
TAACCCTGGGTGGCAAGGAACAAACTTACCAGGAGTCCCATGTCCATGCTCACGGCCTCG
CTGTCATCGTCGGAGCTCATTTCTCCATCGTTCTAGGAAGGCATGGCAGCAAGGAGGTCG
ACGCCGACAGCTCTCGGAGACGGCGAGCGGCGGCGAGCTCGTACTGGAGCAGGGGAATGG
GAGGATGGGAGTGAGCGGGTAGGGGACCGAGCCACAGGGGAGTTTGTTACCCAGTTCCTA
TCGGACCGGTCGACGTAACGGCCGCGCCGTCCCCGCGCTGGGCTAGGTGGCCTGACTGGT
GGGCCTAACCCATGAGGAAAGCGGTTAAATCGCTAGTCACCGTGATTTTGGGTTTTTTGA
AACAGCGAACCACGCGGTTGGTAGTTTTCTGAGAAAAATTAAAATCCATTAGTTTTTTGA
AACCATAGCCTATAAACTAGTAGTTTTATGCTATTTACTATGTTTCAAGGGATCCCATGT
TTCAAACATTCAACCAAGACAAACTTGCACTTCTCTCTTTTTTACGGATGGTGCTCACTA
ACTCCCCTTTAGCATTGCAACTAGATTTGTATTTAAACCAATGTGTATTTTATTATATTA
TGTCTTAAGGAAAGCTTAGAAGTACAATAATGTCCAAGTATATTGGATAAGAAAAATGCC
ATCTATTTTAATAAAGATGTTCACAATGATATGTTTGCCCAGATAATAATCGTCTGAGTC
TGACTGGATGCATTATAGGGTGGACTTTTACTAGACCAAATTCTTAGTAGTGGTACAAAA
TTGACGAAGTTTTGTAATTTTGTAGACTATTCGAAGGACCTTCACTCACATCTCAAATAC
TGCAAAGATATTGTTTTTCCTGGGATTGCATGTTCAGTTGAAAAGGAGCACTTGATAGGG
ATCTTTCAGATCTATACAAAGGACGAGAGGTAATGCATCCAACTTGATATTATCGTCAAC
TCTTATTACTTACTTTTTTGCATCAAGCGGTAATGTACAAAGCACGAGAAGAACTTTTGT
TACTCAGGCGATCACAAAACGCCCGCCAAGTGCCTACTGCCTTTTGATGTGTACCTTTAG
TGCAAATCGTTAACAAGGTTCTATGTACGAATATTATTTCAGGACCAAAATCATCACACA
AAAAACATAAATGATTTTAGGAACCAAACACAGTTGGTTTGAATGATATTTTGCTTTATT
TTGAGGAACTGTCATATTATAAATTTTGAAGATCAAGAACAATAAAGGTGCTATTCAGAA
AAGGTTTTCAATTTTATTTAATCACATACTAATTATATTGAACTTCTAATCTCTACATGT
AGCCCTTCTGAACCTTGGGTAACAAACCATTAACAACCTTCTATTTGTGAACGTTATTTC
AGAAACAAAATCAGCATGAAAAAAACCTGCAAATGATTATACGAACCAAACACATAGATT
TTTTTAGAAACAGCCAAAATATAAAATTAGAATATAAATAGAAAAGCAAATGTTAATCAT
AAAAAATATTTATTTTATTCGCAGCATATTTGACCTTAAAATTTGTACAAATGTAGCACC
TTGAGGATTTGCTACATCACTTTTCGAGGTGAATGTTGTGGACTTGATGGCTAAATCTGT
TGCATTGTAGGATGAGAATCCAAAAGCGCACATGAAGGAACTGTTAACCACAACTGGAGT
GAATAACTGAGGTCGGAATGGAACTTTTGTCGGCCCAAGGTGTTGTTTTGCATCATCATC
AGGGATACTATGTATCGAGTTAGAAATGGAAGACCAAGGATTTTGTTATATGCCGCCGGT
GCCAAGGAAGTGTCCGAGATGGCTATCTTCACTATAGAAAGAAAACAATAACCGGTAGTC
TTGTTTGTGTTGGACACGCTGATTATTACATGTTCATATGCTCATTTTCCAAGCTTGCCG
AAGTTGATATTTGGGTTATTCATGCTAGTGTGCTAAAATTTAAGAGGAGACTTGCGTGGA
TAGAAGACAGAATAGGCAGAAGCTTGGATGCCTTGCAGAATCTACCTAGCTAAGCAAACG
ATGCGCAAAGACAAGTTTCTGGATGTCGCTTTTTATGGATTGCCAATTTTCCAAATCAGT
AAACTGGTGATGGTTTATCGTTCTATTGTCGACAAAAGAGATTATGTTTGTAGTTCGGGT
CTCATGATCCTGAACCAAAAGGGTCCAAAACAGCAGACTCTCTTGCAAGATCTTGCTGAC
AAAGTCACCAGGAACACAGAACTGTATCTGTATTTGTATTTGTACCAACGATGATTCCCA
CGACCATTCTTTGCCTGATAGATTCATTTTCCTTTCCCATTTCAGCAACCTTTGTGTGTT
ACGACTTGGTATTGTCAGAAATATTTGTACTCATGGGTCTTCTGTTGTAATTTTTATTAT
GTCTTGGGTCTATGAATATGTAAATACATTTAGTTTTTAATCATCATAGTATGAGGCTTT
ACTTTTCCACGCAAAAAGTGAAAATAGTATGAGACTTTACTAATAGTTGATTAAGCCATT
ATAAAATAATTTCGTTTTGATCACTTTAAATCAGTTTCTCGACGCAAGCTGGTACTGATG
AAATTCCTGAACATGTTCCTTGACTCTGAAAAACATGGGTGCACTGCCTCAAATTTATCT
CTTCGTCTTTTTGTGAAAATCCTCCAATTTACCTCAAGAAGTTACATCAAAATCTAACGC
ATTCTGACTTTCAGAGCACGAGCTGGCAAGCTGTTCCTGGCTTCTTGCCGTATGGATGGC
AAGCCGACTGAGCAAAAATAACTTGGAATGTTCCGTCAGAGATTAACAAAACTCACCAAC
TTCAGTTTTAAAACGAAACGTTAAATGACGCCATCTTGAATTTAGCTACAGAATATCAAA
CTTCAACGAGTGTAGAATTTAAACTAGAGGTTTCTATCTGCAGACTTGCAAACTATCACA
GTAAACAAAAATCAGTAAAAACATGTAGAAAGCAAGACGAGTCTGAAGCAACACGCAGAC
ATGAACATCCATTCAGACGGCAACATCACCATTCCTTCAGACCAACAAGCAGCACAATTC
TTACAGAGGGTGTAACATCGTACTTCAAACTACATACATAATGCCACCATCAATTCGTCC
ATGCGATGCAAGGCAGACGCCTAGGAGGAGGTGAACTTGGTGACGGCCTTGGTGCCCTCG
GAGACGGCGTGCTTGGCGAGCTCGCCGGGGAGGACGAGGCGGACGGAGGTCTGGATCTCC
CGGGACGTGATGGTGGGCTTCTTGTT