Contig Data
morexGenes
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Map Locations of contig_163578 (3868 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_163578

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_24061 2 537 bp AK354045 Available Available None
MLOC_24060 2 1243 bp MLOC_24060.1 Available Available LOC_Os07g42440.3, FRAME:-1, EVALUE:5e-19, 13107.m04434 protein hydroxyacid oxidase 1, putative, expressed





CDS Structure of MLOC_24061






CDS Structure of MLOC_24060






Contig Sequence (3868 bp)

>contig_163578 3868 assembly3_WGSMorex_rbca.fasta
CAAGTCATTGTTGTCAAGGTAGCAAGTACAATCATTGGGTCTCTTGTAGTTGTAGAGATC
GACTATGGGATTGCTTGGTACATGGTTTCTCCATGAGGGAAACAATGAAACATCATGCTA
AGAAATATTGTACTAGAAAACATGACGCTTTCTAGGATGCCACATTATCAAAACATTGTA
ATGTATTGTTTTCTATTCTAGAACACATAGGAAATCAATTGTAATTTTCTTTACTCCGCC
GTCCACCAGCACACGGACCGCTCCGCCCACGGCCTTTACTACCTGCACGCACACATGAGT
CACCACACACCGCCTTCAGAATGTGCTTTCAAGAAGGGAAGTTGCTGAACAAAATGGAAG
ACGACGGGCACGGTGCAGTGCACCTCTACACCTCTTCGAGAGCGGATATGGTGGCGGGCG
CGTAGTCCATCTGCCGCGCGCCGTGGTTGGACACGATGATGCCGGCCGCCCCGGCCTCCA
CTGCTTTCCTAGCTGTTTGTTCCACATAATGTTCAGCATTTCATGTAAAAAAGGAGATGA
TCAGCAAACTTCTCCTCTGAATTACAGTGCAGATACCAAGAAACGTCTACCGACTTACCG
TCCTCGGCGGTCACGATGCCCTTGAGTAGAATCCGCAGGCTGGTTATGGATTTCAGCCAC
TCCACGTCCTGCAGAAAGGGTTACCAGAGAGAGAATTTTAGAATTCACGTTACAACTTCG
AGGATGCTCACGAGTCCTGAAGGATTGGTTCATGCACGGGTCATGTGCTCATGTCTCCCT
TGTTTTCGGACATCAGTGCAGCAACGGCCAAGTACTGCAGCAAATTCAAGTTTGCAAACT
CCATGCCTCTTTGCGTTTATAGTCAGCAGCACGTTCCTGTTCCTCCCAGAGGGCTTTGAA
TGCGTCTAGCGACTAGCGTGCCTCTAGATGGGTCATGCAGAGTGGCAGAATCGTCCTTGA
AACCACAGTTGAATATACTTATGAAGTGATGTAGGATCTAACTATCTAAGGCTTTAATTT
GCATATGGGTGCCGATTTTGTTGTACCTTCCATGTAAAGACGGGTCCAGCCTGTCGCGCG
CATACTTCTCAAGCTTTGAGTCGTCGGTCTGCAGATGGGAATATGAGCCTTTCAGAAAGA
AAAATGAATCCATGTAATATCCCAATGACATACAAAGTGTTTTTCATCTATCCAGCACGA
ACAAATTATCCCCGCAAAAAAGAAAAAACATATATTGTCAAGTATATTCCATCAAGCAGG
CATTGACTCACAGTATCAAGATCTTCTATTGGCATCAAACCTTCGAGATTTGCATTCGCA
GGAGCAACCATTCTGGGTGAACAATAAGATTAGCAAATCAAACAGAAGAATTCTGTGCCA
TGGTGTTTGTTTAAGATATTGAAAGGCCATATAAATATCTTTTAGGTACAATTTCAGGCA
TGAGACATCTGTATGCTTATCAACTTTTGAGCTCACTGAATCGAATTCTACCATACTATT
AAGATGGTTTTCTCTACAAAAAAAGAAAACTATTAAGAATGGTACTATAAAAAAGCAGAT
TCCCTATAAGAGGGAAATTTCCATATGGTTATTTTGGTGGGTTCAAACTATAACATTGCA
TATTGATCACGTTATGCAAACATTAAAGTCCTAATGAATAAACCCTATCTTCAAATAGAA
GCATATTGTCTTGCCACATGATTGCCGCAAAAAATCGGTTAGTATATGTAGAAGGAAAGT
AACATAATATTCAAAAAAACATTGAAGATAATTTTTTACTTATTTCTGATATCTCCTTCT
CGTCGACCGAGCATAGGAGTGTCAACTGTCAAAACAATTGCCTTGAATCCATGGCTCTCA
GCCCGCCGTACCAATGTTGCTGAAACATTTTTGTTCTTAAACACCTATAATGTTCGTAAA
TAAAACAAAATCAGAGATCAAATGATCATGAAAGGAATTATATCACAGTTTGAAGTCTAT
ATGTCATACATATAATTGATAAAAACGAATCGCATTACAACTGGAGGCAACTTCCTCGAT
TTTGCTACTGGATGAGAAGGATAGCCCCTGTACTTGACAAATATGAACATGTATAGCAAT
CGACCGTTGAAATAAAACACGACTGAAAGATCATGAATTGTCAGTTGACACCAACCATTC
AGGTATTACATGATGTTGTAGCTCTTGCTGTAGCCACCTCCCCTGAAATTAGCATTTAAA
CAAGAGATGTAGAGATATTAGAGAGTTTAGATATCGTATTTTCACATTCTATAATAAAAT
TTGAATTTGAGACCTTCTGGATTTGCCAATTTGTGTGATCCCGTTGGTGCAACAATTATG
GGTGAGGGCATGTCATATCCCAATAAGTTTGTCAACATGTCTATGTTGGTGACATCTACA
AGAACCCGAGGTCGCAACCTACAGAATACACATCGAGACAATCTTCAAGTCCAAAGTCTT
CAGGTCAATGAAGATTTTACCTGCAAAAGGCAGTATAGGAACAGTACAAAATTCTTCCAT
ATGCTGCCATATTGTCCCTCAATGTGTGTTCATCCTCAGCTCCTCCATTGATATAATCAT
AGTGCATCTTTGGCCTCATCTTTGGCCGCACGGGCATCCATTGGAAGTTTAGATTTTTAT
TGACCATTTTTGTACATAACTATGTATTTTCTTTAGCGATAATTAGTTGTATTCATTATA
TTTTGAAATGATCTATATGGAGGTCATATTGTTTATTAGGGAATTACTCCCCTGGTGAAG
TGGTGGGTATTATCAATGTTGTTGCATTCTAAGGTAGTGGTCAACATGCTAGCTAGGATA
AATTGTTAGGAGCACATCGCAGTTTTGGGCTATTACTGTAGAAATTCATGGTATTATCCT
TGCTATGACTATTGTGATGTATTTGCGTTGCTGCATAAATTCATGGAGTGACTCATATTT
TCTAACTCATTTTACATGTATGCTTGTAGGAAGAAATTAACAAGATGTCATGGGAAGCTA
TATTTATGGATGGATCATGTATGGGAGTTTGAAGTGTTTTATGTTCTATGTATTTTTCTT
AACACATTTGAAAGACAACCACGAATGGATGCCTTTGTCTCCTCTACCCATCAATTACTC
CCCTGTTCCTAAATATAAGTCTTTTTACAGATTCTACTAAGGGACCATGTACAAAGCAAA
ATAAGTGAATCTACATTCTAAAGTGTGTCTATATACATCTGTATGTAGTCTTTTAGTGAA
ACTTCTAAAAAATCTTATATTTAGAATCGGAGGAGATATTAAATAGATCGTGCTCAACAA
ATGTGAAGAAACTGAACTCGCCTTCTTTGCCCCTTCTATAGGTAAAACATGCCCTCTTTT
TCAGGCCCCCTCTCGAGTATGGTACATGTGTTACTGCAACAATGACACAACTATTAACCT
AAAGGTGCATGTCAGTACCTCCAAAAGGAAAAAATTCAATAAAATTGTTCTTTCATGATG
CTAATCATTTTCATACAAACTACTATGGTTTGCTTGTCCTTTGGGTTTTGCATGGTGTTC
ATTCCAGAACTTCTATGGAATAATGAACATTATTAAATTCCTACTATTTTGTTACGATTT
TGAAGCTGTAATTGTTGAATTCCTTTAGGTTAAGCTTGAGATGAAACTTTTGGCGGAGAT
ACAGTTTTGATATACAACTTTACTTGGCTTTTAATTCATGTGGTATGTCATCAGCGTACA
TGATATTTTACGCATACTATACACTGTTCTCTCACCACAATTGATTAGTTTCTAAGTACT
AATCTTCTTTTGGTTCACATACATAATTATGTGATGATGGAGGATGGAGCTGTCCTTCAA
AAAATTGTTTAATGAACTAAAAAGTAGA