| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_1632865
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_23953 |
1 |
3204 bp |
None |
Available |
Available |
LOC_Os01g42810.1, FRAME:+3, EVALUE:2e-19, 13101.m04406 protein leaf senescence related protein, putative, expressed |
CDS Structure of MLOC_23953
Contig Sequence (4101 bp)
>contig_1632865 4101 assembly3_WGSMorex_rbca.fasta
TTCTCTGCCGATCTTTATTTCAACACATGCATGTGGTTTAAGACATAATCATCGATGAAC
TACCTTACAAATGACTGGAAACAAAGATATGCATAAATGTCTTCTCTACAATTTGAAATG
GCGCAAAAGGAAAAAGGACAAGGTGAAAGATATAGTATCATCCTATAGTTGACTGATGTC
TTCATTGTGCAGACAAAAATCTTGTTGTTTTTCGTCGCTAGTTTTTTTATATTAACAATC
TTTATGAGTTTCTTGATTTGACTTATATTTATGAATACCTCATTTCCCCACATGTAAAAA
GGGTCAAACTATGGGTATGAACCTCTTACAGCAAGACCTACTAAGAAAAAATTATTGAAA
ACCTAAATACTAAAATGGTTCCTGTAATTGCATAATACTATACTATTAGCAATTGGACCA
TGGATGTACAAACCTCGACGGTAAACTTTAGTGTCTCCCATTGTTTCCCCTTGCAACATA
TATAAGATAGATATTAATCAGGTTATAAATGAGATTTGGCATACTATCAGTAAAATATGT
TAATGAAAAGTAAACACATTGCAAATCTAACGAATTAATTTAAGCCACATGAAAAAACCA
TTTATCTAAACCAAGTGTGCTAAGAACTAGAAAATATAGCAATTGTATATGTTCCACATG
TATTTAGTACATCCTAATTCAAAAAAAAATCACATACATAACAATACAAAATTGTTACAA
CAACAATCGAACATCACATTGCGGAATTGAATCAAACAGTTAAATTATCACCACAACAAA
TGAACCAAATAGTTAACTCAGAGTCACGTTGCATAATAGAACATACTAGAAGGTGAGATT
ACATAATAGCATTACATTGGGCATTTCACTAGAATTTCTAAATGAATGGCAGGAGCAGCA
CATGCAACAAGTAAACCAAACATGCTTAACCGGCATAGCTAGCTAAACATAGGTCCTTAG
TAATAAAACTAAGAAAAATTAAGTTATTCCTCATATCGATGACGATGGGTTCCTTAAACT
TAAAAGAGGACGAGACCTCCACATTATGGATGCCCTCCTCGTAGTGGTGAGTGGCATGAG
CCTATCCGGCCACCAACTTGCCGGCTCTGGAGGTATGGTAAGTACGAACATGTTGCCTCC
CTGGGAGCACTTCTCCAAGGTGCAGCAGCAGGCCCCCGCATCGCCATGAGAAGTGCTCTC
GAACGTGTCTTTGTTGCTTACCATGACCACCACTACAAGTCGCGAGCACCCGACGTTGGC
TCCATTGGCAACGAAGGCGAGGACGATCAGTTGGCGCTGGCATCGACGTGAGAGGACGAA
CGAAGAGGGGAGGGAATGCAGTGTGTTCGACAAAAGGTGGGTGCATGACCCGACAAGGTA
TCCACTGTACGAGGTGGCAGAGTGCTCGTTCCTCAACGACCAGGTTGATAGACGAAGGAA
TGACCACCCAAACTCCGGCTACGAGCAATGGGAGTGGCAACCAAGGGGATGTGTCACCGA
CGCGAGGTTCGACAACTCCAAGACGTTGTGGCAGTGTCGACTCGCTGAACCGAAATATGT
GAGCGTCGCTAGGCTGCATCATCTACACAATATTGTCCGACCGGTCGCGGACGCGCATCC
ATGGCATCAGCTCTTTCGCGCCATGATACGTCTTTGTCCATTCAGCGCTTAAGACTGTTA
CTAGTGACACACAACAGAAACAGTTGGTCTGGTATATCAGTCGAGTCCAAAAAGGCATAA
TTTGATACCAAAAAAATCAAAGGTCCAATTCAGTTTGGAGATTTTTAAAAGTTTTTAAAA
CCAAAGGAATCAAGATGTCAAAGGAAAGTTCCATGTAGGAAACGAGCATAACCATATATT
AGGAATGTTATTCATCTTATTATCCATGGACTAACAATTAAGATTGAATTTATTTTATTT
TTAATAGAAATGCAAGTCCACTAACCAAAACTTGTAAAATCCAAATAACAAGCACATGAA
AAGATTACCAACAGTTTCACATGTTATTACTTAATGGAACACACATTGCTTCACTTTAAA
CACAGTATCACAAAATATCTTATATGTGAACTTAAACCAAATTATTCTTTACAATATAAT
GGGAAAAAAATCACAGTTACAATTGCTTGAATGACTCTTTTTGAAGTCGATCAACGCGCT
CATACTAACAGCACCCGGCAAGCTCGGGTCTCAAGCTAATTATTTTAGCTAGGGACAACT
AAGAATGCTTGTCAAGATAGGAGAGTAGCTTAGTTGGGACAACCTAAAAATGCTTGTGAG
ATGGAAGGAGAGGAAGCATTCAACGGAGAGACCAAACCAGAACCAGCTCTTCTTCAGAAA
AATCTGACCTGTACACAAAATGTACAGTTCTACAAGTAACAAAAACTTGTGCAGTCAACA
CGAGCTCAGACTAGATGCACACCCTTCAGTGTACACCACACTAACAGAGATGCGACAAAC
AGGATTTTACATTCAACAGACAGAATGCATGGAAACTACATAAAGAGATGATACCCATGA
AAGGAAATCAACACTCCAAACTTACCGAAAACATCATCGAAAGTAAAAGCATTCTTTAGA
ACCTGCAAAAATATTCGACCAATCCTACCAAGCAGACATGTCGATATCACTCATACATAT
AAACAGTCCACAAATTACCAAGCAAACTTTCACCATACACGACCATAAGTAACTTGGTAT
CACAAGACAATACACAAGAATATAAAAATGATGATTCGGGTATTTAAATAGACAGACTGC
GAAGCAGTCATAAGAAGTACATGTCTAGTGAAGAGTTCCCATAAAAGACTAATCTAGCTT
CATTTATCTCTTAACAGCGAAAACTCAGAGCAAAACTGATTTCCAGATCAGAGGTAGCCA
GAATATGCAAGACATCCATGCATGCAGACAACACTTCTGAATTCAGCACAACCATTCAAA
GCATATGCTCCCAAGAGTTGTCAACAACCTGAGTCACACATTCACTAGAATTCAATCAAT
AGTTCAGCTGAGCAAAAATATACAGACAAAATACAGGTAATATGACATTAAATACAAGGG
TTAAAAATACAATGCTTAGTTCATCATGTTCCGAACACAACACCTAATCCTTGCTTATAT
AGATGATAAAAAGGGTTAAAAGCATTCTTTTCAAGATTAAGAAACTACCATTTGGCAAAC
TTTAGAGTAAATACTGCAAAATTAACCAAAACAGAGCAAAAAGATGCAAAAACAAAACCA
ACAAGAGCATAAAAAGAATATTGATGAACAGCAAACCTAGTGTTCAAGCGGCAAAAAACA
CACTAAACTATGGTATAACTAAGATTACACAGTAATCTTGAATAGTAGTTGTCAGATAAC
ACTTTCTATTATATTACGCTTTCAATGATACATAAACGGTTCAATTTATCACGGGACATG
AATAGTTATGTTTGTGGATTCACCACTGAACTGAAAGAGTGGCCAATAAAAATGAAAATA
AAGCTATTCAAATACAAGATGAGATGCATTCTATGCATAAGCACAAGATGTGCAACTGCA
AACTAGTGACAGAAACATTTGAAGCAGAGATTTCCCATGGGTGTATTATGTAGTCCAGAT
GTATACAAGTACTACCTCCGTTCCTAAATATANNNNNNNTTAGAGGTTTCACTAGAGGAC
TACATACGGATGTATAGACATATTTTAGAGTGTATATTCATTCATTGGCTCCGTATGTAG
TCCCTTAAATGAAATATCTAAGAAGACTTATATTTAGGAACGGAGGGAGTACATAGGACA
GAAACATTAGACAAACATGGCATAACCACAAATTTAACATTGAGAAATCTAACTAATCAA
ACATAAGGAAGCATCATATAACCGCAATCCATCAATCAAAATCTGGAATAGGAAACTAGT
TAAAGATTGTAGGTTTTCGCGATGTGGAAAGTGGAAATGTCTAGTTCCAGGTTTTATGAA
ATGCGCTAATGCTCTGGCATTATGAACTACTACCTCCATTCCTAAATATTTGTCTTTTTA
AAGATTCAACTACGGACTACATACGAAGCAAAATGAGTGAACTTACACTCTAAATTATGT
CCATATACATCCTTATATAGT
