Contig Data
morexGenes
Links



Map Locations of contig_162908 (5276 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_162908

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23755 1 764 bp AK369235 Available Available None





CDS Structure of MLOC_23755






Contig Sequence (5276 bp)

>contig_162908 5276 assembly3_WGSMorex_rbca.fasta
AAAAGATGGCATGCAAGTTCTTATTGCAAGCACGTATGACTATATGTGGAATACATGCCT
ACATTATATTGATGAATTGAAGCTAGTTCTATGTCGTCCTAATGTGTAACTGTTACATGA
TTAGTTTCATCTAAATCATTATCCATCACCGTTCTACGTGCCTACGCTTTACATATACTG
AATCTCGCTAAGTTACTACTGTTGATGTTACTGCCACACTTGCTAATCATTTGCTACTGT
CGCTAGTGTTACTGAAATTGCTACTTTCACTATTATTGCTACTCTTATTATTTTCCGTGC
TACTAAACCTTTGTTGTAGAGAGATATCTCACATGCGGTTGAATTAACAACTCAACTGTC
AAGGCCAATAAATATTCTTTCGCTCTCCTTGTGTCAAATGAGTAAATTAGGGTGAAATAC
TCCCGTGAAGACTGTCGTGATCCCCTATACTTATGGGTCATCGTGTTATTTTGCACAATA
CGAATGTCGAGTATCCGGGTGATGGTGTATCTCAAACCAATGATTTTGAAGCCTCCGAAG
AAGAAGTTGAAATCCCGGAAGATCAAGATGCAATTCAACTTATTAACTTTCTGCAGATGC
ATCAGAATCTCTGGGATCATCACGTGCACGAGCAACTACTCAATGATCTAGTGGAGCATA
TGCGGACCCACAATGGAAATGAAAGAGCAGATGATAAATTGTGCACTTCAAATAAATTTG
ATGTAAACGCTACTTATGTTTGATACCAACATTTGTTATTTCCGTATGACATTTAGTTTG
CATGATCGACGTGAATGGTTTTGCATGGATTTGAGAGTCCGGGTATGAGATATGTGGATG
CAGGGAGCAAAATACGAAGAACCATCTGGATGCGTCTGTGGGCGTGCCCGATCGTGTTCG
CGAACGTATAGGGGACCGGATTTACCAAGTCTGGATGTAGATGCTCTTGGAGCATGCTTA
GTAGTATAACCAACAAGTGGTTATATAAAGTTACCATATCACTTATAGTCAACCTAATAT
CCCATTCATACAGTAGTTAGTGATACTAGTAGGATATAACGTTAATATATGGCCAACCTT
TCATCTCTCATAGTGGATGCTGGAGCATGTACTACAACCGATTATAAGCTTGTAGCCCGC
TTTTCTTTTCTCATTTCTTCTCTCCTCCACCTAAGCACTCATGTGGTATCCCTTATATTC
TCTCAATGTTATTTTATTTTACGTGTTCTTAAAGTAGCGACTTGGCTTATTTGCAGTCAT
GCGTACGGTCGTGAACTTTGCCGACACGCCCTCATCCGTACCTTAGGCTTCATATTCTCA
CATTTCAGCTTTACCTATGAAGCCGAGCAAAACAACACATGTGACAACCTAATTATCATC
AAGAGATGATAAACGAGGAAAAGTAGGGGAATTGATTTTGTTTACAAAAGTTAACAAATT
TGGGAAAAACTGAGAAACTATGATTTATATGAAAATCATTTTTTGACATGGAAACTTGAA
GGTGAGATAAATAGGAAGAGGGACGTGGAGATTTTTTTCCAAAATAAAATCATGAGTAAT
CAAGAAAAAAATGTCGCAAAACTAGAAACTCTACCAATGAATCATTTATGAACAAAATTA
GTATTTTTGATGATTTCCATTGTTTCCAAGAAGCTTGCCAAAGCCCATAGTTTTCTCAAG
TATTTTTAATTACATTTCTAAAATACCTGAAATCATTTTTTTTCTGGAGTAGTTCTGTTT
TCCCCTAAAAATATTCCATTCTTTTCATCCTCCGACTTTTTATTGTTCCAAAATAGTCGT
TGAGTGGGCTTCCATGTGTGCCAAACCATAATCAAGTCATCATCAAAACAACTTCGACCG
AACCAAGGGATAAAATGTCGATGGCACTTTAGAGATAAATGATTTATTGTTTGAATTTGG
GTGACAAATTTGGACTGCCACAATAGTTTAGGGACTCTATAAATATTGTTTCTTTTAGCA
TTTCTGTTTATTAACTTATTAGAAAGGACCACGAGAGGGTCATAGATGAGCGATAGAAGA
TACGCAAACACACTCTGTGAGTGTTTTCTCCCATTATGAACCAATTAGTTGTTTCATCTT
GAATACTGAAAACAACCATCGTTTAGTGTGCATATTGTAAAAAAATAGATTTATTGTTGG
GATACCTCCTTATGAGGGTTGTGAGGAGATAACACATGTGAATCATTTGGGCAACCCAAA
CCTGTGGCAAACCCAATACCATTAGGCTTATGACCTTGTGTTATTTTGGTCTTTGCGTGT
GAGGGAAGGGGGAGGTCTAGTCCTCCATCCAGCAGCCACCAACACAAGTGACGAGAATCA
CGTTAACCTCCATTGAAGAAGAGGAAGAGAAAATCGGATAGGGAAATAGAGGGAGATTGA
AGGAATAGCTTGCAAGCAAACGAAGTGAGCTCATTCCTAAGGTTGTGATGATCTGATCAA
CCACCCTATTTCTTTTCAAGCAGGTGTTTCTACATCTTTGGCAAGATTGTTCCAACCCAA
GCTCTTGAGCCCAAACTATTGTTTTTGCCATCCAAGATTGAGAGGTCTTGATGTATGTGA
GTCTCTGGTGCTATCAAGGGAAGAATTTGGTGTACCCACATTTGATTATAGTGAAAGAAT
ATTTGGGTGGTTTTGGCCCATGGTTTTCATCCCAAATTTGGGAGTTTTCCACTTAAAAAT
ATCGGTGTTCATCTCTGTTGATTTTCTATTACTGTTCTTTGTAAATTTGCTTGGCACCAA
ACGCCTCTGAGATGGATTGTCTTAGGTGCGTCGTGCCGGAAAACTTACTCCTAAAAGTAT
TAAGTTTCTTCCTAAGTTTTGACTGACCGAAATTACTCCATAGCATCCTAATTTTTTCGC
TTCTGTGATTAAGTAACGATCTGTGAGTTAGTGTATAGAGATGATGCTAAAGTTACTTTA
TTTCCGTCGCATGTTTCAAATCACCATTAATTGTGAGCTAATTCCCAATAGTTGTCTCGT
TCTAAATTCCTGCAAGACAAGCATGCAAAGGGAAGCTAGTGCCTAGAGTTTAATATTTAT
GTTATGGAAAAATTGTAGCCCTTTCCAAGAAAATTACAAATTATTTTAGAAAATTTTAAT
GTAATTTTGATTTAGCATGACTTTAATAATAAAATTTCGAGACAACAATATTTCTGTCCC
CAACGAAATTTCAGTGAAATTTAGATGAATGTAAGTGAAATTTCAGGCTCAAACCCAACA
CCACCTCGGACCATTCCCACTCTCCTTTTTCTTTACATAATATGTTTACCATCTTAACCA
ATAGTTTGGCAAAGGCTAACTGGACAAAATAATTTCAGGATTTCTGAAGTGATGACAATA
ATCCCTGCAAAAAAAGAAGTAATGACAATAATCAAGTAAGCTCTTGTCAAGTCCAAAGTG
CATATGAGCTCTCAGGTGCTACGCCCCCCTATATTCAGAAAGTAATTTAGTAATTTAAAA
AAAACTGGAACTTTTTATGGAATCAAGCATGACCAAGTATTGCACTCGTATAAAAAAAAT
AAACGGGGAATGACCTTCATTGCATCCAGGATCAAAGATTTCCCAAAAAATGCTAGATAA
AAATACTATTTATGCTATATTGTCGTCATTTTTTTTTGCCCTGAAGTCAACAGGAATAAT
TCCTTGGCCAAACTTTTTATACTAGTACATTACCTAGTCGTATTGGATCCTAAAAAATTT
CTGCCATTTTTTTATCCTTAAAAAAAATTAAATTGTTTTTTAATATAGGAGTGTGGAGCA
CCGGAGTGCTCCTAATCCACTCCCCCTGTGAGGTTAACTAAGTTGCGATCCGTATCCTAC
AACGACCATTTCTGATAACATTTCCAGTTTCACATTACAAATTTAGTATATCATCGATCG
AACGAGATGTTTTCCTTGGTGGACTTCGGATAAACTAAAAGGGATGAAAATTAGTTCAAG
TTCATGGAGCTGCACTAAATGTCTTGAGAGCTAGAAACGGGTATCCAATCCAAACAGAAG
TATGCATATCAGATTCTGACAATTTCTCTGATATGGTTTTCATGCTCAGCCGGCCAAGAC
GTGAAGGGCACTACACTTAGTCGCTGGGAGCTCACAACATTCTTTTCAACACGCCAGTTA
GTCCTTTTTACACACCAGTTAGTTGATCAGATGACAAAGATAACATCAGAAGAACAGCCC
CTATCCTAATCATCGTCGAGCTACATATTGTCGAAGATTGTCGTGCTAGAGTGCCGATTT
AATTTGACATACACCCTAATGTATGTTCAAAACCACTTTCGAAATGGATCTGAACGATTC
TTCAGAGTTCAGAAGTGCTTGAACTGCACATATCTAACCTGCAAGTCTGATGAGAATTTT
GAGTTACTTCCCCTGAACTTGTGGTATTGAATGTTCAATTTTGTCATGGGACTTGTGTGT
GAACCTTCACAGCCCAATTGACTGCAAAAGCATAAATGACCTCGTGTAAAATGGAGTACA
TCCAAGATTGCTTGGAACTATGAATCTTCATGCATTCCATATTCAGAACCATATGTAGTT
GCTACTGTTCCAAAATAAAATGTATAGTTTCTACTGAAAACCATATGACCAAACCTATAC
GTACCAGGTTTCTGTTTTCTGTGAGCAGCTCTTCAGACTGTTAACACAACAGGAACCAGC
GCACCAACACCATTTTCTTTCAGTCTTTCTTGAGAAGAGAGGTTGAACATCTTAACTGCA
GCACAATTTTGCGGCAGAACATGCTCTCGACGGACAAAAGAATTAACATTGCTCGATCAA
ACCAACATTACAAATTGAAGAGGAGTTAAAAACATCACGGAAGCAGCACGAATCCTTTGC
TGCTACCCGCAAGAACTGCTCTCCTAATCGGCCAGTAACCATTTTTTTCTTGCTTCGGCG
TCAGTTCCTCCAGAACAGGAAGGGCACCTTCACGTCGCACGACCTGGACACCACCTTGGC
GCTGGCGGCGAGCCTGTCCACCGCCATGGCGCACCGCACCGTCACCGGCAGGGCCCACGT
CCTCACGCCGCCGAGCTGCAGCCGCACGGGCACGGTGATGTCCACGTCGAACGGCACCGA
CTTGAGCCGCTCCGCCGCGGCCATCTGCCCGCGCTCGCGCTCCGAGAACCGTATCCCGGC
GCCCTTGGCCCTCGCCACGAACACCGTCACGTTCCCGGGCGCCTGGTAGAAGGCCGGCCA
CGCGCCGTCCGCCAGGCTCACGCCCTCGTACGACACGGCGACGCGGCTCCCGGCGC