Contig Data
morexGenes
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Map Locations of contig_162892 (3385 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_162892

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23748 1 292 bp MLOC_23748.1 Available Available None
MLOC_23749 1 339 bp AK249970.1 Not available Available None





CDS Structure of MLOC_23748






CDS Structure of MLOC_23749






Contig Sequence (3385 bp)

>contig_162892 3385 assembly3_WGSMorex_rbca.fasta
GAACGACTTGGTTGGAGCACCCAAGGCTGGAGACGCCAAAGCCCATGCGCAAGGGGCTGG
CCACGACCACTCACCTGACGGCATGGATGCGTTGGAAGCACCGCAACTCCTGTGTGTTCG
ACGGTGAGCAGCCATCCATCGCCCTGCTCACGACTAGGATCAGAGAGGAGGCATCCCTTT
GGGTTAGGGTTGTGGGGCAGCGCTGGGCCTTGGGGTGATCATGCCGCTAACCTGGGACGT
TCACTAGTTCCTGTACTTTCGTTTTTTTTGCTCCCCGGTGAGCCTCCTCCTCGGAGGCGT
GTACTGCTAAACTATCTCCCTTTTTAATGAAATGGAACCCAGAGTCTTTGCGTTTTCTCG
AAAAAAAAACTAGTTGATAAGGAGGCAAGAACATCTTTTGTACTAGCGCCACAAGCAACA
ACAAAAAAGATGGGAATTCCATCCCTTTCATCCATAATAAGGTGTTGGCATGATGCTCAA
TCTACTATGGTTTCGACTGTATTGCAAAAAGTACTCCTCAATAATCAACAGTTCCTGAAA
GCAAGAGTTGATCTTCAAACTGGTAAAAATAAAAACTTAAAAGGAACCAGTCTCCTGCAA
GGATTTCACGGTTTGTCACAGGCAGATCACTACTAATATTATTACCGTTACCAATTTTTC
AGTAATAAAAACTTAAAAGGAACCAGTCTCCTGCAAGGATTTCACAGTTTCTCACAGACA
GATCACTATAAAGTGCTTAGTACAATATGATTGACCAAAATTTGACAAGTCTCAGGCTCA
AAATCAACTCGTGAACGTGCATATACAGTAGCACCATGCAGGAGAAAACTTTCACAAGAT
TAATTCATAAAATAAATTATTGACCACAGCAGGATGATCAAAAGGAAGCATACCCTCGAG
CACTGACAACTTCAGCTTCCCCACTTGCACCAAAAGCTAGTTTTCCACCTGGGCCGCGGA
CACGGACAAGCCTAGTCTTCATGTACATGAGAGCTGCTAACTCTGACTGTACCAAGCAAA
CGACAAAGTGAAATAAGTAAATAAACGAAATATCAATGTTCGTTCTTCTCATTAATATTC
AATATAACACAAATAACGAGACCCTGTATAGACCAACAAATGATGAGACAGAGTAGCATG
CAGTCCAATATATAGATAGAATGTACCTGTAGCTTTGCTTCCTTTGTTTCAGCATGAGCA
TTGAATATCTCAATTATAAGGCCCACCCGATCTAAAACTGGCTTTCCCAAGGCAACCTAT
CAACCAAAATATCAAAAGAAACAAATAAAGCATCAGAAAGTCAGAATACACATTTCTTGG
TAACTTCAAATAAAATTCAACTCAGGAGACTTGCCTCCAAGTTCCTCTGTTGGACCCCAG
AGAGGAGCGTATTAACAAAAACTGCATGTAATTCTTCCTGATAGGATCAATGCAAATACC
AGGTATTAAGATTTGAAAAACAAAATGAAGAGTGCTTAAGAGAAATAACACAATGTTTTA
CCACATATATCATAATATACGATATTTTAGCATGCAGTATAGAAACAACCAGAAGAAAGT
AAATACAGAAGCATAGAAAGGAAAATAAATATATGGCACACTATGTACAAGAGGCAAGAC
CGCAAGAGAAATGTGCACCTTTTCGTCCAATGCCCTCAGGTAACACTTGATATTATCCAC
AGTTCCAGGTCCAAAATATGTATCTGGCATGATGAGTTGTGAGATCAGATAAACATTTGT
AATCCTAAACAAGCCACGTCAATAAGAAATACCTAAGCGGGAAGACGAATTTCAAATGCT
AGCAAAAATGGTTCAAGATGAATTCTAAAATAACTACAAACGGGCAATGGTACAAAATTC
AAGTGCATGTATTGAGCTTCATAACTCAACTGTGGCCCTCTTGCTTACCAATACAACTCC
AGGATATACATAACTCTTTTTGTCTGTGTATATTAATCTAGAAGGCAAAGCTCAAGTTTT
ATGGAGTTAACCATTGCACTTTTCAAAGGGGTTGGCAAAAGCAGATCTCTGCTCGCAACC
TCAAAAATAATGATAACTCGCAAGAAGCGCTTTGTATCCTTGCCTTATGATGAGAACGAG
TCTATGAACCCACAGCCTAAACCATCAAAAACTGTATGCTCTGCCACTTGAGCTGCGGTG
TCACACTCAACACAAACAATACAGCAAAATCATGGATATGGAAGAAATAATATATCACCA
TCACAAGACAACTACTGTGCCACAAAGTTCAAAATAATAGATCAATTGCATCACAGAGAA
ACATGTATAGTAACTAAATCCTTGGTGCCAGATTGCAGCTGACACGACTTTCCACTTCAT
ACCATATCAAACAGAGATCCAGCAGCTATATAGAATGTGTTCCATCACGGGGAATTTAGG
AGATCAACATAAGTACCATTTAGCACATAGGGGGCTGGTCTCTAGGAAAAAAGATTTTGG
AGGTTTGGGGTACCCAATTTGAGGGAATTTAATATGGCCCTTCTGGCTTCGTGAGGGAGG
CGGTTCTTTGATAATAACAATAGTGACTGGAATAAACTGATTGCTTATAAGTATAATGTG
TATGCCCAAAATATTCTGTGGTCCAGACAACAGGTAGGCTCCCCCTTCTGGAAGAGTGTA
TCCTGGGCGTTGCAAGCTGCCAAAAAAATTTATTACTGGAAAATTGGTAACGGTAATAAT
ATTAGTTTTTGGCATGATACCTGGGCTGGGGATTGTTCCCTTAAAGTGAGATTTTGGGAG
CTGTTCGATATCTGCAACCAGCAGGAATGCTCGGTGTCCCAGGTTTGGGATGGGATAACT
CTTAAACTCTCCTTTAGGCGGTGTGTTGAACACAAGGGTATGGTGAGATGGGAACAACTT
ATTGATCATATAAAAGGTTTTCCTTTGTCGGAATCCCAGGACTTGCCTGTTTGGCTCCTA
GAACCTAATGGAAAGTATTCGGTGAAATCCTTTTACAATTGCATTAACTTTGGTGGTGTG
GTCTCTCCTTTTGGAGATACTCTGTGGAAAACTTTGTGTCCTCAAAGTATTCATGTCTTC
CTGTGGTTGTGTTTATACAATAAAATCTTAACTAGGGATAATGTTGCTAAAAGGAAAATA
GTTGATGACCTATCCTGCTTGTTTTGTAATGAAGCTGAATCTATTCAACACTTGTTCTTT
GACTGTATCCGTGCTGGTAGTATATGGTCGTTAATATCTGATTTTTTTCATATTCGAAGA
ATTAAGTGCTTTGATGATATCTCCTCCTTGTGGAAATTAAAAAAAAAAGACATGTGCTTA
ACCTGGTAACTGCTGCCTCCTTATGGAGCATATGGAGATTGAGGAATGAATTATGTTTCC
AGGGGCGCACATGGAGAGGCCTGGG