morexGenes - Barley RNA-seq Database

Contig contig_162832
Source Contig contig_162832
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_162832 (6267 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_162832

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_23723	2	1550 bp	AK365432	Available	Available	None
MLOC_23722	1	754 bp	MLOC_23722.1	Available	Available	None
CDS Structure of MLOC_23723

CDS Structure of MLOC_23722

Contig Sequence (6267 bp)

>contig_162832 6267 assembly3_WGSMorex_rbca.fasta
GATTCCCAAGGCACCCCAAGTCAAATGCTAGGAAGACTCAAGCGTCTAATCTTGGGGATG
CCCCAAAAGGCATCCCCACTTCCGTCTCAATCCATCGGTATGTCACTTGAAACTACATTT
TTATTCGTCACATGATATGAGTTTTGCTTGGAGCATCGTGTAACGTATTAGTGTATTAGC
ACTCATTTTGATCTCAACCTCTAGTGGAGCAAATCGAAACTTGGCGGCAAGTTCATTTCT
CTGAAAATAAGCATATCACAAATTAGTGCAACAATTGGAAGAATAAGAAAGTTACAATGT
CTTCCAAACAATGGTCTTGTTCACGTATACATGTATCTCATTTTCCCACCATTCATCACT
AGCCACAATGGTCTTGGTAATAGGATCAAACCCAATGCATGTTGCCTATTGGGTTCATGT
CTTCCAAACAACAGAATATTTTTTAGCACATCCCACTTATTCTTGAATTTCTTTTTGGTA
TATTCTCTCATGGTACACTCAAAAAACTTTTTTACCACATTGTTCATGTCCAAGTGGTGT
CAATGTTCCTTCTTTGCCACGGTTATCGACATTCACTTCTTCCACACAAATATCAATGAA
AGTTCTAAGACCCACATTATCCCATTGTGCTTTCATCTATTTTTTATCATGTCGATACAA
AAAATTGGAATAATTAATATGGTGTACAAACGATATGTACATTTCTGCCATATCAACACA
TCTATATCAAAATTATTTCTGCCATATCAACATAATACAACCAATACATCTATATGAAAA
TTATTTCTGCTATATCAACACAATACAATCAAGACATACCAGTACTCCATATATAAACAA
CACATCATAGCATATCCCAGGAACTGCTGACAGGAACAAATCACTTCCAAACAATCATAG
GAGCTGCTCACCTTGGTGGCTCATGGCCAAGACGAGGGGAGGGGGAACTGGGGTGAGGCG
TCGTCCTCTAGAGGGGCCGGACCGGGCCAGGAGCTCGCAGGGAGGGAGGGGCGGAGGGGA
CGCGGCCAAGGAAGGGGTAGAGACGGAGGATCTGGGGTGGAAGATGGAGATCTACCCGCA
GTCCATGTCGTCGGAGATGGCCTCGTCGAGGAGCGGGCGACCTGAGGACCGGCGACGGCA
GCGACGGGCAAACCCTAGAAGCAGCGAGAGAGGAGAGGGGGGAGGGGTCGAGTGTGGGAG
GAGTGATCCCGATATTTCCCTCGACGGTTCAGTCCGAGACCGACCGATGGCATTTTTTAT
GTAATAAGATCAAATAATAGGGACACACTGTTATATTCTGTTTTAAATGAAGAAGTTGTG
GGAAGTCACTCTACCCCCACATTTTTCCATTGTGAAGGAAAGAAAGGTGACAATAAGCTG
AGCTCGCTTCTTTAAAATGAGTTCTTTTCAGCTTCTAGCTTATTTTTATAATAAGGCATG
TGCCAATGCAAGTCTCTTAGCGCGGTTTCATAGGCATTTTGCTTATGTGGCATTGTATTT
AATGAAGAGCAATAGTGAGGTTGTATCTTAGCTAACATACAACCTTGGCATGTGGCCATA
GGCAAAAAAGAGGTGCTAACCCAATCACATACATGCATGAGCCACAAATCATTAAATTTA
GATACAACACATAAGATACAATGCATTGTACTAGTTGTTTCTTATGTTTTTATTACACAT
ATGATTACGTGCTAAGAGACTATGCATTGGCACATGCCTAAGCTGCTGCAAAAGAACTGG
CACTAAGTTACTCCCCCACTATGAGGCTGTCCGTAATGGTAATATCAAAACTAGTATCAT
GCATGTCAACTAGGCAATTTTAATGATGTGGCCTTCAAAAAAAATTAATGATGTGGCATA
GAATTAAATGAAGAAAAAGATGGTTTAGTATCATATCATGATACCATATCATATTAAATG
ATGTGTTACTATGTGTCATGCATGGTAATAAATGAACTATTTTATGATACTAACATATGA
TAGTACTATGCACTACAGATGTAATGATGTGGTCTTAAAAAAATGATGTGGCATAGAATT
AAACGAAGAAAAAGATGGTTTAGTATCATATCATGAATACCATATCATATTAAATGATGT
GTTACTATGCATCATGCATGATAATAAATGAACTATTTTATGATACTAACATATGATATT
ATGCACTACAGATGTAGTATCATACTTCCTTCGTTTCTTTTTAGTCCGCATATAAGATTT
GGTCAAAGTCAAACTTCATAAATTTTGACTAAATTTATAGAATAAAATATCAACATTTAT
AATATTAAATCAATATTAGTAGATGCATCATAATATTAATTTTCATAGCATATAGGTTTA
ATATTATAGATGTTGATATCTTTTGATATATATTTGGTCAAACTTTATATCACTTGACTT
TAATCAAATCTTATATGCAGAATAAAAAGAAACAAAGGGAGTACACTAGTATCATATGCT
CCTGTTACAACCAGACTAGTCTGAGATCCATTTGTCACCATCATCGTTGGATCGGGAAAG
AAACACGCACAAAGCAGCCATTATGGATGGTAGACTGTTTCCGTTGAAGCCCCACGAACA
CTGATAGCACGGAATAATAATCGCCGCACAGTGAACATCTAGCAGAAGCCCCACGGAAGG
AGCAAGCGTCGGTGACCAGACATGGTCAGTAGTCACACCACCACCTGGGCTGGGCTGACT
CTTGACCATCCAGCCAACCGCGCCCGTCAACTATGCCTCCTGGGCAGACAGCCATATACC
AGGTTCAGAGTCGTCAGAAACTCAGAATAGGCTCTGCGCATCTTAAGATGAGAGGATTTT
GGCCCTGCTTTGTAGAGAGCAAAATAAGGGAAAACGTACTAGCTTTTTCAGGGTTCTAAA
AAAAACAGTCACTCTTCTCGGTAAAGCCCACACCCATTATCTAACCCGTCCCAGCTTAAA
CCATCTCCCAAGACTGTTGTTGGAAGTTGGAACGGAACAGCGTCTCCATCTATCTTGGTC
TTAGCCAACGGTGACTCAGTATCTCACCCGTCTGTCCGTGGAGAAACACGCGGTGGCACC
AACTACTTGGGCTCAGCCAACGGTGCCAGTACGTCTAACCCCGTCGCTGCGCGCTCAGCA
TCAGGAGGGTGTGTGACACCACAACCCTGAAGAGTAAACAGATTCCTGGACATTCCCACC
GCATCAAACTAGCAGCCAGCAATAGCATACAACCCACTAACCCAGCTTAAGCCCAGGCAA
AACGAAACTATAAGTTCAAGCATCATCGCGTCAAAGATGTGAGACATCAGTCAGCAAAAC
TTAGTGCTATCAATCAAGATTACAAAAATAAGTTGTGACCGTAAATGTCCAAACACTGTC
AAAATTTCCCATCTCCAACGGAGCAACTGGACACAAATATGGGTAAAATAGAAGCATCGA
TCATATCTATGTTTTACACCACTACTATGTTCCGACTGATCTCACCTGCTCGCCTCCACC
TCATAGCTTCCCGACCTCAACTTGTCAGGCGGCAGGTTGTCATTCGCCACTCCAGCAGTC
CCCATTGCCAACAAAATTCGTCCTCTCAAGTATGTATGGACAAACTGGCTAAATAATTAT
TGTACTGGGTTGCTGTGGATCATATAAGTCACCTATTTCCAATTTTACAACAGTGCTACA
TCTGCAGCTCAAACCAGTTCAAACGAGGCGATATGAACTAATTTCACAAAGATCAACAGT
GATAGTAACGGACCATCATCAACTTGCCTCCACTTTCTTCTCCGTGTGTTCTTCATTTGG
CAACTCCTCCACTGTAGCCATGTTAATTAATTCACTCTCTACTACTGAGCTTGTAGCAGA
TAATCCATCAGCAGGAGCAACTGGGGTCGATGGGCCTGAGCTGGAGCCTGAGTATTGCCC
CATCGAGTTCTTTGATGTGTTTAGCGCATGACAATGTGGGCAATAGTACGTAATGTGTGG
GTAATCTTCCTTCCGGGCCAAGCCTGCAAATTATTAAGTTGGTAGTAGGTCACGCATCCA
TTCTTTGTAAGGAAATAGCTAAAAAGATCAAAGAGTTCTATTTCTCATGCATACCATTAT
GCATATGGCAATTGCCACAGATCAGAGCGTACGACTGTGATGGGTCCTCCCCTACGAGTA
AGGCAGCGATTTTTGCAATCCATCCACCATCACTTGCCCCAGAGCCTTGACAATGTTCTA
CAACCCTTGTAGGCTGTACGTTTTCCAGGCCAGCATTAAGAGTTGAGCTAGATTCAGCAC
CTTGTACCGAAGTATGAGCAGCTGTAGTGCTTCCAGTCCTGCTGCCTCTTGCATTGGGTT
GCTTCCTGTTTCTCACACCATCTGATGGCAGTATCTCAGCATTGTTGCTCATAACCACTG
CCGCATCAAAATTTGGTTCTTCCCCAAGATGTACTTTTAAGCCAGAATCCGCCCCCAGCT
TAGATGCCAAAACCGAAGCTGCTGCAGCTTTTGCAGCTGGATCAAGATCATATTTCTGCA
CATGTTCAAGTTGGGATAAACTTTGTCATCATTTAGTATTGTTGTGTCAATGACATGATA
AAATTATATTCCAAGTAATGAACTCAATAGCTTGACCAATGACCGTTTACCTGGATAAGC
TGTTGTGTAAGGTAATAATTCGTCCGTTCTTTCAGTTCATCAATCTTGGCCTTCCTTTCA
GCTCTCAATTTTTCCAGTGTTTTTTCATCTTTCCGTTCACCTGTGGACACAGGGAAGTAA
TTCAATGATAATAACAAGGTGTACTGATAAGATGATAAATCATATAGGTTAGTACAGGGC
AAGATTAACATATTAATACATATCACAAGATAACATAAGTGCCAAGATCCTTCCTGGCAA
AAAGAACGTTGCCCATTTGTCATTTGTGTATCAGAACAAGCATGCAAATTTAGACATGAG
ATGATTCAAAACTCCAACACTTAAATGCCAGGCAATCATGCAGCTATCAATATTTGTTGT
GATACAGCAGTTATGCCAAATAAAGTGTTAATAACTTGCCAGATATATCTTGTCACTGCT
TCCATTTTCAATTCCTAAGATTGCTTTCGGATAAAATTAACCACGCCATGTTTCTATTTG
GATAAATAGCATCCAGGGGAACAACAACCACTTTCATGGAGATATTATTTGCACTTATCT
AAGTCCCAAGCAATTCGACACACTCTTTGACTGCCATCAAATTTCAGAACGTCAAAAGAA
AAGAATAGCATTCCAGCTAAAATGAAAGTTTGTATTATAAAGCATAAAATTCTGTAACAC
AAGCTACATATTACAACCTCTGAAGTCAAACCCCACAGCAATCTTTTTGCTAGAAGCATA
AACATTTTAGGGAAGATAGGTAAAACTAAAGGAAATCTATCTCCTCTGATAAGATCGCAC
ACAAGTGAAAGTAAAAAGACTTGAGTGAGTCAAACTAGAAGCACCACAAGTAAAATATGT
GCAAAGAAGTGAAAATGCTATGTGTGCAAGTGCATACATATATTGTAAACTGTTTCGTAT
TGCATACTTATCAGAAATTAGAAGAATGGAAATTGGTTTAATCTTTTCAATTCAAGCCCA
GAAACTTAAAATACAGTTCACACCAGCATATGTGAACTAGTACAATAGTGTGCCAGATAA
CAACATACTGTTGATCTGCAGAAGAAAAAAAACATAGTGCCCCATACTTCACAATATTAA
AGCCAAAGATATAGTTACAGAAGTCACATTCGACACGCATATAAACATGACGGGATGACA
GCACCAATGCAGGACTCACTAAGAATGGTTAAAAAATTGCAGAAATAGTTCAAATATGTG
GACCACTAATTATGAATTCAGACAGTGATTTCAAGATACTTACGCATCCTTGTGAAGTTT
ACAACTGCTGAATATACCACAGACGATATGGCAGGCAAAACAAATATAGGCAGCACTCGA
ATTGCCCTCATTTGCCAAGTGAGATCTTCGTCTCTTGTCATCATGATGGCATAACCAACA
GCCACAGCCTGAGAATAGGACCAACTATTAAGAAGGCACAGATTGCTTGCTGGATACTTA
GTACAAAAATAGCCATTACTGGTCTAATATAAATGTAACCCATAGAAGTGCAGAACTCAA
CAATTCACATAACTAGAGGATCGCAGAGGCAAACTGTGAATCCCCAAACAGACTCTCACC
ACAGCATAAGAGGAAACCAGTGTTTCCTTTTCAGCAGATACTCAAAAAATAAACCCTCTC
GGCAATCCTACTTAGTGTTGTTCTAAT