morexGenes - Barley RNA-seq Database

Contig contig_162818
Source Contig contig_162818
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_162818 (7292 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_162818

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_23712	3	2432 bp	MLOC_23712.1	Available	Available	LOC_Os07g07010.1, FRAME:-2, EVALUE:0.0, 13107.m00679 protein glucosyltransferase, putative, expressed
CDS Structure of MLOC_23712

Contig Sequence (7292 bp)

>contig_162818 7292 assembly3_WGSMorex_rbca.fasta
TTACGGAGTGAATCTATACTCTATAATATGTCTATATACATCCGTATGTAGTTTATAGTG
GAATCTCTAAAAGGTCTTANNTTTAGGAACGGAGGGAGTAGTTTTATCATACAACAGAGC
ACCCGATAATTCCTAAACACGATTTACCGACCATATAAAATGTATCCGTATCTGCTCCAC
GTTCAAACATTTCATCCATTTCATAGAAAAATGAATCAATTCCGTTACAAAAGGAACACA
CTCAAGGTTACAATGGTACAATGACTATCTTCTACAAAATTAGCTGTCAAAATTTACAAT
CATAGGTCCTTCTTCCTACCTACAGGTCTAGGGTGGAAGTCCAACATCCATTGCTTATAA
TTTGTGTACAGGGTCAAAATAATAAACTGTGAGAAGCAGATGAACATTATCAGTGCATCA
AAGAGGAAGGGATACCTCTTTGGAGGCTCTATTTGCAGGTACACAGTGTGAAGTAAGATC
GAGCATAAAAATGGCAGGCTCAGAACTACCATTATTCCAGAAGGAAATTTCACCCCCTTT
CCGTAGTTTCCACCAGGTGGGTAGTAAATAAGAACGAACAATCCAAGAACAGCTATATAT
TGTAGAAGAAGCTGATCACGGCAGATAAGCGGGTACATCGAAAAAAGTGCATAGTAAGTG
AACCATCCATGCAGCTGAGGTTCGTGTAATGCTAAAAGGCTTGCGGGTAAAAGAGGAAGC
AAAATTGATTTCTCGTGCACTGCAATTGTAAAACAAAGAAACATGAAGATCAAAGAAACA
TCATATATACTTACAAAAAGAGAGAGTATCAACTCAGCAGTTGAACATACCTTGGTACGA
GAATAGATAGAAAGAGAACGAGCTGTTCAACAGAGAATAGAGGAAGCCAAGATTACTTGG
TGACTTGACTTGCTGAAGAAATGAAGGCAAGAAAGCCAGGATGGTAGCAGACAGACTCAT
AAGTTTCAGAGGCTTTATTGCGAACAATCTCTTCCACTTGATAAGAACTGAGGTGGTACA
CCAGAAATTTGCAACATAATCCTCATATATACCTCTCTCAAATGGAGCCAATCGAGAGAT
TACCTGACAGTGGAGTTAACATGTTTAGTGAACTGAGCCAAATATATATAGAATAAGTTT
GATTTTGGTGAATTGACCAGCTCAGTGAAGAGATCACTACATTTTAGTTAAACAAGATTT
CTTCGGTATAGATGTGTTTGCTTGAACAACAAAACAACCAAATCGCAGATGGATCAATTA
CCTGCATGGCCGCCTCATAAGAATGCACATAAGGCCACCAAACAAGAGCAAAAGTTCCCA
GTACAACAAAACCAAGTTTCATGATCTCAATAATTGGATACTTCTGCTTCAGGCATTTTC
CAAGAAGATGCCCAAAAAAAGCTGGCGCAAAGTACATGCTCATCTGCAAGATATCAAATG
TGCCCATGAATTTACAGAATCACATCACAATATATGTGAAAAGCTCTATATGAACAGGGA
AAGGCGCAGATTAGTTTTATGGAAGTAGCCCAGGAAACTGTAATAGATAAAAATCCATGT
AAGACTTGTAACTGATTGAGCAGGCTTACTCCTTTTTCCCAACGAAGTAAGTGGCACAAT
TAATGAATTCACTCCCAATTTCCATCTCTAGCAGCCCATTATACTGCCAGCTTGAGCTAG
TTGGAAATTCAGCTAGTAGCCCTTAAAAGTTGGGTGCTAAGGATTGTCATTGTACCAAGA
CTGCATGCACTCTTCGTGACAGACTACTCTATTTGCATTACTTTGGGATTGTCTCTAACA
GGTCTGTGACGACTGGCACTCACTGTAGATGCTACTGCCATTTGGACGATGATCACTGAC
TTTGTCATTCATGCTAGCAGCCGCTTGGGTTAAGTTAGCATCCACTATACACCCCAGGAA
CTCCCTTTGGGATTCTGTGGGGTTTGCAAAGGCAGAGATCTCTAAGATGTATGACTTACA
CCATGTTTGTTGATGAAGCTTGAGAGTAAGAAATAATTTTAAGAGTAAAGGCAGTTTCAT
CTCCCTGGAAATAAAACAAATATTTTTATATTTATTCCAGATAAGGAAGAACCTGCTTAT
GGTTAATTGCAAGACTGAAGAGAGCAGCAGCAACAAGTTGGTTCCTCGACAGAATACCAG
CAATCGCTCCGAGTGTCAGCCCAAGACTGATGCAGTTATACTGAAACAAAAGGACAATCC
ATCATTGTGTAACACACTGTCACTGGGCAATGCAGTCAACACTATTTGCTCTGCTCCAAT
GAACATACACCACTAGTATAATCCCCACCTGAAAATGGCCGTGGTCGATTAATACTAAAC
ACGGGTTGAGAAGAACCATGGCGAGCAGCCACGTCCACCCCTCTCGCCTCTCCCCACTAC
CGCCAACCCCGTCCTTCATGTACGCCCACACAAACCATAGCGCCGCCGGGAAGAACACCA
TGAGATCAGACGAGAGTACTGTCCACCGCATAAGCAGCTTCCTGCAGGAAACAAACCACA
GAGACTTAAAACAGGCACACAATTCTAGGCACCACGATGTGGTAAATGCAAGTCCAGAGG
GGTGCGTACGATTCCTGGGACTCAAAGCCGCGAGAGGATCGGAGGGCGACAGCGTCGGGG
AGGGAGGCGTTGATGAGGCGGGCGTGGAGCCGGCTCTGGTAGGCGGAGAGGGGTGGGTAG
TCGAGGCCCCAGTAAGCGAGGTCGTTGTCGGAGGTGTTGCGGTACCAGTCGGAGGAGGGG
AGGTGGAGGGTGAGCTCCATCCAGTGCCGCTGAGCCTCGTAGTCGCCGAATTTGGGTGCT
GCGCCCTGGCCCGAGTAGGGGCCGACGGAGACAAGCGCGCGGAGAAGGAGGGCAGCGAAG
GAGATAAGGAGGGCAGTAACGAGCGGCGGCGCTGGGGGCTGCCATGGTAGCCGGGCGGCG
ACCGATGGATCTGGGGCGGAGTTCCGGGACTTCTTCGCCTTCGCCATTGGCGGCTTCCTT
GCTTCCGGCAGATCTTGGTGTCGACTTTTTTCTTTTCTTTTGAAACTGATATTGGTGTCC
ACTTGATTAACTGCAGGAGGTTTTCGCTAAACATCTCTACTCCTCTCCTTCAAGGACTTT
TTAGTCTAGTCCCTGGGTAAAGAAACACCACCTTTGTTTGACGGTTTTGTTCTGTCTCAT
CTTTTATTTTGGTCTGATTTTTTCGCCACATCACTCGTCACCGTCTTTTTTGTCTGAATT
TTTCGCTTCACCATCATCCTTTTTCGTTGGAAAAAAAATCATCTAAATGGATTAAAACTT
TTCATGCGTGCATAAATTATTGGAAAACGATTATGATGTTACGGTCACGTCAACCGCGTG
CTCTACCGTTTGATTGTCCACTTGCACGTGTTTTCGATCGCGTCACTTGATGAAGAGACG
CTCATTGCAAACCTTTCGTGCATCGGTAAGTGTGTGTGACTTCACTATTGTGTATTCCAG
CTGATATTATGAGTAACTTTGCTTGTAGATTTGCATGCAACCAGCTATGCAGTACTAGAT
AGTGGATTTTATTTTTATTTTGCATGGCACGGTAACGGAGTTTTTGCTGCCATTTAATAT
TGACTTCTTCATGTTTGCTACACAAGGAGGGAGGTTCACGCTCACTCGTTGTTGCTTTTG
CCTTGCGCTCGTGCGTGCAGCCACCGAGCTCCATCGTCCGACACCATGTTGTCACCACAT
GACATATTTTGATGCAGTTGGACATGTGACATTGCAGCGCTCGATATTGCTGCTACAAGC
GGAACATGTGACACTGGAAACATTGCAGCCGCGAAAGCCGAAAGCACGTCAACGCCGCAA
TCCTAACCTCCCATTGTTGAATAGCCGAAAGTACACTCATGTTGTAAGCTAGTCGGCGTT
GTATTTTAGATGTTGTTGGGCCGCATGACGCTGCAAGGTACGTGGCCTTGTTGCAAGTAG
GACGGGTCAGGGCGTGGTTAGCCATGCTCTGATTCACACCAATATCAGTCCAGCATTGGT
CTTGCAAGCAAAACATGTGACTCTGCAAGTGAGGGAGTCCGGGACTAAGGGGTCCTCGAG
CCGCTTACTCATTTTCATGGGCTGGACTCCTAGGTCGTTCTATCATCGTTGGTGATACTA
TATTCAAGATGTACTTTTTGAAGACTTGGCGTTTAATCCAAGGCCACGTAGTGACCGACA
TATTCCTTCCCTAATGTAATCGATGTTGTGTAACCCTAACATCCCTGGTATATATATATA
AACCAGGGGGGCATAGTTCGTACGATAGATTAAGCTCATTACTATTAAGGTTTAGACGAG
AGCATCCGATCTTGAGGTAGATCAACTCTATACTCTGTGTAACCCCATCAATATAACAAG
AGCGGGACATAGGGTCTTACCTCCATCAAAAGTGCTCGAACCTGGGTAAACATCGTCTCC
ATTGTCTCTTGTCACCCATCGATCCAAGATCCACAGACCCCCTACTTGAGATTTGTCGGT
TTTGACACCGACATTNGTGCTTTCATTGAGAGCTCCGTTGAAGGATCATTAGAAGGATCA
ATGGCTCGCTGATCACCAGCGAAGACATTAACACCGGGGATATCTTCGCCTCCGGCCATT
TTTCTGCTTTCGGCAGTACTGTCCCGCACGTCAAAGTGGTTCATCACGAGATCAACGGGC
TCGCCCCGGGCCAGGGATTCCAGTTCGGCGATTTAGATTACGCCGTCAACGCCCAAAGCG
ATTTGATCCTCACCGGATCTCGGCTTTGGCTGAAGAGCTCAGAAACCCTGAAGCCTTAAC
TTCGGGTCCTTTCCCCGACCTTGGGTCCGGGATAATGCATGCCTTAGATTCGGCCTCGAG
CCCGCTTCTGACCTTTGTGTTCGAAGGCCCGGGGAACCTCGCCTGAACACCACTCCCCGC
CCTAACGCACCGGAGGTCAACACTGCCAGAATCCTGAAGATCAATTTGTTCAATCTCCCG
TTGTCAAACGAGACACCGATCTAAACCCGAACCATAGATAGTTCGGACGGCTCGGCCCCC
ATCTATGATATTTTCGGCTCTGAGTCCAGGTGCGAGTAACTTTATTCCCCACCCACCACC
CACTTGATAGCCACTATCGAAGATCTAACCGATCTGGTAGACTTCTCTTTAGAAGAAGCC
GAATATATTGACACGGCTGTCAATACACCTGTTCCTCCCGCAACTGGATGGTGGACTGCC
ACTTCCACGTACGACGTGTACATGGTGGACACCCCCAAAAACGATGGCGTCGCATGGAAG
AGGGATGGTGACACACCAGTCAAAAATAGTGGCGACGGACCTGTCAGGTGCCTCGCCAAC
GCAAAAAAGCCTAAAGCTCTTAAGGGCAAGGAAAGTAACGCGGGTACTGGAGATAACCCC
ACCCCTCATGATGCGGAAAAACCTGTTGAACCGGCAGACCCCGAAGACAACCCTGATGAT
CTGCAGGAGCACAGTGATTCGGACAAGTCGGAGGATCCCGAAGATTCCAAAGACAATAAC
TACGTCCCTCAGTCGAAGACGAGGGGAGCTTGGGAGACGAAGATTTCATCGTCCCCGAAG
ACCCGTTGGATCAAGAAGTATTCAAGCGGCAGCTCATAGCCACTGCTCGGAGCCTCAAGT
TAAAATAGAGGCAAATTAAAGTCGAACAAGACTCCGTCAATGAAAGATGGACGAAAGTCC
TAGCCACCGAAGAAGGGTACGGCGAGGAACGACACGGACAAAATAAGAGCTACCCACGTC
GCACGTTACTACCAGAGGTTGAAGACGAGGCCTTGGAGCCCGCACCGCCCAGATTCGCAC
AAGATGACCAACCGGACCGCCCCCCTCGAGGACGGGATAAGACAACTGGATAGCCCGGAA
ACCACCCTGATCACCCCGCGCAGAAGGAGAAGAGAGATGGCTCAGCCCAAAGATCCATTT
GACCTACGACACAATATTAATGCTAGAACAGGACAACCAAGATCTATTTACGGATCCAGA
GGTTACACTCCCGCTAGGCGGGACCGGTACCAAGCTCAGTTTGATCACAATGATGGAGTT
CGGGAACACCAACAGTGCAGGATTTCATCCGACCTCCAACGTGGTACAACTCGGATAAGG
GGCGCTGCTCACCCAATGTGCTTCACAGATGAGGTGATGTAGCATCAGTTCCCCGAAGGG
TTTAAACCCATAAATATAGTGCAATACAATGGTACAACAAACCTAGTCGTATGGATTGAG
GATTTCCTTCTTCATGTTCACATGGCTTGTGGAGATGACCTCCACGCCATCAAGTACCTA
CCATTAAAGCTCAAAGGGCCATCAAGGCATTGGTTGAACAACCTCCCCGAAAGCTCCATT
GGGAGTTGGGAGGAGCTCGAAGATGCTTTTCGAGACAACTTTCAAGGCACTTATGTCAGA
CCGCCTTGGTCCGATGACTTGAGCCACATCATTCAACAACTGATGACTCCTCTCGGCAAT
TTTGGAATCGATTCCTCACTAAAAAATCAAATTGTTGATTGTTATGACGCAAAGGCATTA
GCCTCTTTCCGAAACAATATACGAGAAAATGGTTAGCCCGGACGCTCGGACAGGAGAGGC
CGAGGACAATGGCCGCCCTGACGTCGCTCATGACCCGCTTCTGTGCACACGAGGATACTT
GGCTAGCCCGTCGGAACAACGCTACAGTCCGGGATTGCATTGGAAAGCCACGGCGCAACA
AGAACAACCGTAGACACAATGGTGGTGAAGTCGATGACATGACAGTTAATGCCGGATTCA
ACAACTCTAGGTATGGACCAAGGAAGAGACCTTCCAAGGGAAATCGGGATGGCCCAACCA
CGCTGGACAAAATACTTGACAGGCCCTGCTAGATCCATGACACCCAAAACAAGCCCGCTA
CTCACACCAACCGTAACTGTTGGGTGATCAAGCAGGCAAGAAAGACTATAGACGAGGACC
ACGGTAAGAGCCCCCGCAGCAAGGATGATGAGGAACCTCGTCGGCTGAACAATGGGGGCC
AAAAGTAGTTTCCTCCTGGAGTGAAAACCGTGAACATAATCTATGTCACACACATACCAA
AAAAAGGAGAGGAAGCGTGCATACGTCATAGATCCAGTAGCCCCGAAGTACAACCCATGG
TCGGCATGGACGATGTTGGGGCATAGTTTATGCCTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTCAACGACACAAG
ACGACACGTCTCCTCATTCATGGCACGGAAGC