Contig Data
morexGenes
Links



Map Locations of contig_162795 (4140 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_162795

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23699 2 599 bp AK376987 Available Available None





CDS Structure of MLOC_23699






Contig Sequence (4140 bp)

>contig_162795 4140 assembly3_WGSMorex_rbca.fasta
CCCAAGGCAACCTAGCACAGGATTTGGACCCCAGGGGATTAGGACCCAAGAATATTTGTA
CGCACGTAGTAGCTCTCCGCGGCAACCCTTGCCGGGGCAAAACGTCGTGCGAGCTTCGCA
GCGACACGAACCTGGGTAAACGCCTCGAGTCTCCTCGTCGTGCCCCCTCGTAGTTTCTGC
TCTTTGTGCAAACTTATATTTCTTTACAGAGGGAGTACATAATAAACTGATGTAGAAGAC
GCAAAATAACTCAAATGTTGACCCAAGAATTAAAATCCTACTCACCAATATAATCTGGAG
ATAAAATGATAAATAAAACACACCTCATTTTGCAAATAATACTGGTGACTGATATGTTGC
AAAATAAAATCCAATCAGAGCAATGTGTTACCTCACTGTGCCAAATTGCATCAAGTGTCC
CGGAATGCATATATCGCTGAAAAAATCAAGTGAAACTGAAGAAGGAAAACAGTAAACAAG
TTAAAACTTAAAACTCGTCATTTTGCGTGTAACGGCTCTCAAATGGAACAAATTACATAG
TGATAACATTATGATTGTTAATAGATGCCAGAACAGGATGAGAGCATGGATCATTTAAAT
CTTGTGGGCACACAAAGTACTAATGCTCCAACATAGTTGAAAAGAGGAACAAACAGGTCA
TCGGTAATCAGCTAAATGTACATGCTTGCCAAAAAATGAAATCTTGGAATCCACAATGAA
ATACTAAGCTCAATTTGTTTTTCCATGCACCAGTGCAAATCCAGACATTGTGCTGAACTA
TATTTTGACTTTGATTAACCAAATAAGTATCATGCTTATTGCTCCTAAAGCATTTTCACT
TTATTCCAGTTGTCTTGTCTCTAGACTGGGCCCAAAATTCCCTAGATGAGGCTCAAAATA
AATAAAATATTTTTTTGTTTAAAACTGGGTTTAAGTATGGTGACCAACCTTCCAAACTTG
TAGCCAAGATATGTGGTAAAGTATGGAAAACAACCAAACATGATCATTTTGGCAGTGCAC
GATATCATGATTAAATTAAAAATGGCACAGCATAACCCAACTTTTCATCTTTTGCTTAGA
AATTAGAATGGATATATCATGATGAAAATTATGAAAAGTTCCCCTGCAGTGCAAGATGTT
ATAAAAGTTAAAGACAAAATTACTAGATATAGGCAGATGAATTCAAGCACGGGGTTACAA
CAGGTTGCAAACCAATTAGTAAACAATAAGGAAAAGCAAAAATAACTAGGTCACCTTGTA
AGCCCTTCTCATCATATCCACTGATCTTCCCAACAAGAACCTCCCCAATAAAGGGCCTGA
ACATCAATAACCTAAAGGAAACCTGTCCAAGATAGGGAAAATGAAGGGAATCTAAGCATG
ATTTGTAAAATGAATAAAAGCTCAACAACGACACACATTTTGTACTAACAGCAAATCAGA
AGGAAGGGCATCCATGGTACAAGTAAAAGTTAGACATACTATTTATACTGAGTCATTCAC
AACAAGTAGCACACCGGCTAGGAAAAAACTAGACTACCCACTTGAGGCAGAGAAATAATC
AGCATTAACTGACAGCAAGGAATTGGATTTTGACACCGAAATAGTCAAGTAAATAAGTAC
AAGTTGAGAGGAACTACTGCTGTTAAAAAATGTAGTTGATTAAAACTGGCATTAAAAAGT
TTAGTGTAAGAAACAAACTGCCTAACTGGCAAACTTATTGTATTAATCTGAAAAGTTCCA
GTTCTATGTAAACACAGCAATCAAATGTTAAGCACTGCTAAGAAAGGCTGCAGGGTAATT
ACATGAACACCAGTGAGAAACTGCAGAGGAACGAATTAACCTACTGGAAATTCAGGTAGC
AAGCTCAATTGCACAAACTGAAGGGGTGGAAAAGCAATGTAGTGACACTTTTAGGCATTG
ATTTGTTCATTTCTTACAGAGCCTATACTAAAGAATGCAGAATTAAAAGTAGTAACATCT
CACATTCCTTAACAAGCATAATTGGATGACAAAAGAGGTAGCACAAATTACTGTGTACGT
CGAGCAACCCTCTCCTGGAAAGATGAATCCTCCTTCGACTTTACGGATGTCATAGACAGA
CACGCAGAGCCCGAGATTTGCAACCACCTACAGTGCAATTCCAAACACAGATTGAGTAAT
ACATATAAGAACCATTGAGCGGAATAGAATTCCGGTACAGAGAACAAAATCTTGGCATGT
ACTGATGATTATGTGAGCTAGTTCACACTACCTTATCCAGGAAGAGTCTCTCGAGCTCGG
ACTTGATGGCGTCAACAAGAGGGCGATTCAGCAAGTGCGGAGGCATCGGCAGGTTGTGCT
CAATCTGGCTCAGAACAAACATCCTTCACGTCTAGTAGTGCAACCAGGAAAATATTAAAC
CCTGGACAAGCTGCAAGCAGAAATGTCTAATCATGTGATGTACCTAACAAGCCATCAATG
CATAATTTAAAACTGAGAGCCATAAGCCTTGGATATTTGAAATAGATATAATCTCCAAAG
CTGACAGCCACATATCCACAATACTTTCCAAGTAGAACAGGTATCCCCCTTCTTTTCAAT
ACAAAGAAACACAAGGCTCTTTGCGTTTTCTCGAAAAAAAAATAGATGAGTACATCGACT
AATTACCTATTTTGACTGAATTTTCAGCATCCAAACTGATTAAGAGACTACTGGATAATT
GATGCTTTCCCCAAAAGGAGACGCATTTTCCCTTAAGTTGTGCTCATTTGCTCTCTTTTC
TAATTGTTTGTCCACTCTTCTTTGATGGTTTATCTGAAGTTAGTCTTAATGAAACGAAAT
CACTTAAACTATTTTTGTGATATCTGGTCAGAAGAAACAATTTGGGGCAGGGCAGATAGT
ACATTGTACTTAAGTAACATTTTGAATCATAAACCCTACAAACACACACAACCATAACCA
GTCCTCTACAGTGTAGTATACACTCTCTGCTCTGTACTGACACTACTTGGTGACAGCCAT
GGCTGAGCCGAAGTTCTGGTCAGTTAGCAGTATATTTCCTACTTATAAAGGTTGGAGTTG
GTGGTGAGTTCACATGTGGGACCAACAATCTTCATCAATAAACAAATGCACCCCTACCCA
TATTGAGAATAGCAACCTTCCATGAACATAAATAAACAAATGTATTTGTGCTCACATGTG
GGACCAAACACAAATAAACAATACACTACTATTCATGTGAGACTAACACTTGGACACAGG
TAACAAATGCAGAAATGCGACTCCAACTCAATATAATGCTCTTTTTTTTTTTTTTTCCCA
GCCAAGTTATTTCAGTTATATATCACAGAACAAGAGAGTGAACAGATTGTATTAGAAAAC
GAAGACGACGACATCCCTGACACCCTCCCAGACAGCACTACACAGACAGGCATAAAAGAG
ATTCCATAGGTCAGTCAACAGTAACATCAGTGAACTGAGCTAGCCTGAATCAATCACTGG
CCTAAATGGTTTGCCCAGCATTTCATCATTCATCTTGTGCATCATTTACTTCACAACAAT
ACCCAAATTGATATAGTGCTACAATTCACCTTGACCATGGTCTACTAGTACTTTGTAGCA
GCATTAAGCATATATCAACTAATACAAACAAACTGGAAGCGATCGCATAGCCAAATTGGC
ACCCAGTCCAATCTCCAACCACAAATCGAGGTCGAACCAGGAACCGTCCAGCATACATAT
ACTCCGGGCGAATTGAGCCCACCTGAATCGATCACTGGCCTAAATGATTTGCCCGGCATT
TCATCATTCACCTTGAGCACCATTTACTTGCAGATACTATGCGACAGAACCTTGTTCCAG
ATCCCCCCAAGTCGATCAGAATATTGCAATTCACCTTGACCATAGTCTAGTACTACTAGT
ACTTTGTAGCAGCATTAAGCATATCAACTAATACGAACAAGCTGGAAGCGATCGCGTAGC
CGGACTGGCAAGCGGTCCAGCCTCCAACCACAAATCGAGGTCGAACCAGGAACTGGGCAC
ACACATGCTCAGGGTGAAGGGAGCCTACCTTGCAGGCACAGCCCAGCCGCGGCGAGGCGA
GGGCCAGAGGGGAGGCGAGGCGAGGGGCGGAGGACGGCGCGGCGACCCCTGAAGACGAGG