Map Locations of contig_162646 (2000 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_162646

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23618 1 437 bp AK370884 Not available Available None





CDS Structure of MLOC_23618






Contig Sequence (2000 bp)

>contig_162646 2000 assembly3_WGSMorex_rbca.fasta
CCGGGACTAATGGGCTGGCCAGGGCCGAATGATAGCCCTGTTTTCTACTAGTGTTGGGGC
TACAATTTCTAGTAACGCTCGTAGTTACTCGCATTGAATGCCCTTGTAATGAAGCACGGC
GGGTCCTGACGAACTCTATACAAGCCAACCCGAGATCCATGGCAAGGGTTCAACACCCAT
TGTAACAAGACACCCCAAAGAAAATACAAAGCCTTCGGGCACGGGACGTAGGGTCTTTAC
CTCTCCGAGAGGGGCTTGAACTTGCTAAATCCGAGCGAGACACCTCTGTTGTAGCTAGGC
TACACCCTCATTCATACCCATAGTACTATTGTCAGGATTGTTCGCTCGACACCACCAACT
TCTCATTCATACTTCAACATACCAGAAAGACCTTTAACACAGATAAGAAAAAGGTAGGGA
GAGAGGGGGTCTCCTTGCCTTATACCTCTGGTTGAGGTGAAAGTATTAGTCTCTCGAGAA
TTATGTCCGATCTTGTATCTCACAGAACTAACATATGTCATCATCATCTCAATGTAATTT
TCATGGAGTCCCATCTTCAACATCATGTTTCTTAAGAAAACCCATTCCACACGATCATAT
GTTTTATACATGTCCAACTTAAGTGCACACAATCATGTTTGCCCTACTAAGTGGAACGAT
ACAACCATTGTTCATGATCCCCAAGACCGACTCCCCTGAACTGGTAATTTAATCCTGTCC
CATTAATTTACATAATGTGCTCCATCTTCCCAACCGAGGAGTATTTATATCGTATGCACA
CACTCATGCTAAAAATCTTATATGGACATCTTCATGACTATACGGAGCTATGAGCATATC
AGTCATTTGAGTGGTGACTTTTGCATCAACTTTTTCCAAAATAGAAGGAGCAATTTGATT
CACCTCAGATGCGAACAATTTAATAAAGTAATTCCGAACAAGAGTATTCGAAGACATCGT
ACCTTCCACACAATTACCATCATTATCTTTTAAGTTTTTGACAAAATTCCTTTTCCTTCT
CGCAGAAGCATAAGCTTGGAAAATCCCTGTGTTCCTGCCTCCACACTTCATTCAGCCAAT
TCGCACTTGAAATTTGCATCATGAATCTCTTCCGGTTGAAGAAGGTATTCTATTACTCCC
TAAATACTTTTATATTAGTTTATAGAGGGAGTAATTCTGAAAGTTCTTTTTTCCTAATAC
CATTATCACCACCCTCTCAGAATCCCTTAGCGTCATGGAATTGATCACGCATTCGGTTAG
CTGCAAAGACGTTTGTAGGAGATGCTCCTAATTTAGGGGAAACACCGAACACGGTTAGCT
GCAAAACTAACTAACCGTTGGGCGACGTCGACAGGACGAGTTTTCTGTAGCACGGCGTGG
CCCACGCTACAGAGACAGAGAAGGGCCCACGTGTCGCTGGTGTGGCGTGCCCGCTCTCCC
ATTTGCGGATTTGCCTTCGTTGGTCCACCTCCAGCTGGGCCGCCCCCCTTTCCAGTCACC
CGTCCAAATCCATCTCACCTTTGCTTCCTCCTCCTCTTCTTCTTCTTCTCTTCTCTTCTC
TCAACCCGAATCCAAATCCCAAATCCCCAACCCGGCGACGATGGCCCGCGGCAGCCGCTC
CGGGAGTAACGGCGGCGGGTGCGCGCGCTGCTGCCTGGGGTTCCTGCTCAAGTTCCTCGC
CTTCCTCCAGGCCTTCGCCGCCGTCTCCGCCGTCCTCTACGCCGCCTCCATCCTCTCCCG
CTGGTCGCGACAACACGAGCTGCGCTTCGACCATCTCCTCCCGGACCTCTGGTATCGCGC
CTTCTGTTCCGCCATCCCCCTCCGCTCCGGCCCGCTCCTCTTTCCGCGCGTATCTTATCT
AATATGTGGCTGGCTGGCTGCCTGATTCAACTGTCTGCAGGTTCGCGTGCGCCGTCATGG
CCGCCGGCCTCCTCTACTGCGCCATCCTCCTCGCGGGCTACGTCGCCGCCGAGGGGCACA
ACGGGGGGGTGCTCTGGTTC