Contig Data
morexGenes
Links



Map Locations of contig_162642 (2268 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_162642

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23616 1 813 bp MLOC_23616.1 Available Available None





CDS Structure of MLOC_23616






Contig Sequence (2268 bp)

>contig_162642 2268 assembly3_WGSMorex_rbca.fasta
GAAGTTATACGAGTGTTGGTACGTGATAAGCAACCACCAAGGCTCCATTTAGACAACCGT
GTCTCTCTCAATTCTCTCGCCATTTTGGGACTCATTTTTCTCAATTCCCAGGAAGAACTC
AAGAAATGCTTAGGTGTTTCGAAGCCTAGATCACCCTCGCCCTCTTATATTAGGAATATA
TATGTGGATTCTAATCTGATGCTATTTGTTTGGGCCAAGCACAGTTGTAAAATAAATACG
ATTGAATAGTCCTGATCAATGGCCCATCATATGTTGGAGTAATAATTGAGCGCTGGTTAT
CACCAACCAAATTTGACAGCTGTTAGCTAGTGTGCCATGTTTACTTAACTTCTGGAACCT
TCGAACAATTAATGCCATCCTATCTACAAAAGGAGGGTATGTCCTTCCAATCTGAGTTAT
CGCATAGCATAATCGAACTCTCTGTCTCTCGGATCGACCTAACATTTTGCGTTCTCCACA
AAATCTACCCCACCTAGCCTACAACTTCGGTATCGGTGGCGACATCTTCCCCGGCTTCAT
CGAGGAGGGCGTGGAAGTCTTGTCCTTGCCCCCGCGCAAGTTCCCCTTCCGGGAGAACCA
CAACAGGGAGTACGGCGAGGTGTGGGGCTTCTTCTTTGCAGCGCAGCACGCCGGGGAGAC
GTGCCCGCCGCCAGGCACGGGCAGGTACTGGGTGCAGTACGGCGCCGAGAAGGTGTACTA
CGGCCAGACCGGCTGGGAGGCGGTGGCGTTCCGGCGCAGGTTCGTGTACCGCTTCACGTG
GAAGGGCGGGGAGGTATGGTCGCCGACGCGCTGGCTGATGAAGGAATACCGGATCAACAG
GGACTCGGCCGCCTTCCGCCATGCGTACCTAGACCCTAAGGCACCGGACGTCGTCTTCAT
GGTGACCAAGGTCTACCGGAAGCCGGTGCTCCCCCCGCCTGTCGACAGCAGCTCCAGCGA
GGAGGAGGGCTCTGAGCGCTCCATCGTGCTGAACAGGAGGCGCTAGCATTATGCAACTGC
ATGTTGATTTCTTCAGCGTTGTTGTGTCTGTTTCTTATTTCATTTCAGTTCTGGATTGTG
CGCTCGATCTAGTTGATTGTTCCGCTTTGTTCAAAGTACAGGCGTAATGAGCCTCCCTTG
CAGCATATGTAGAACAGTTCGGACGTATTATCACCGTTTCATTTTATGATCCACTCCCTC
CGTTCCAAAATATAAGACATTTTAGGTATTTCACTAGAAGACTANNNNNNNNNNNNNNTG
AGTGAATCTATACTCTAAAATATCTCTATGTACATCCGTATATAGTTTATAGTACAAAAT
TTTAAAAGGTCTTATATTTAGGAACGGAGGGAGTAGGTTTTATGTATTGGTCTCATGTCT
TCGCATATGAATGATTTTAGATTTTATGACTGGTATTTAGGAGTAATGGTTTCCAGTTCC
AGTGACGGCAAACAAGCTAAGGAGATGTCTTCACATATGAATAAATGGAAGATACATGTC
TGGAAAACTTTCCTGCACATAATCACATATCTTCTATATCTAAGTAGTTATAGCATCTTC
AACCGTGCCACCAACACGCCCCAATGTCTTTTTTTGTCGCCGACGCTAAAAAATCGGCTT
TGTGGCGTCGGAACCCTTTTTCGCCGGTGAGTACTGGAATTGGCCCAGCGGTCCCAGGCC
GAACCTAGCGCATTGAAGGGGGGAGCGCCGGAGGAAATAGTTTTGGTGCGAAACGGGTGT
GGACACGCCGAGTCAGTGACTAGGCTCGTTCGTCGTCCTCATCGTCTCGTTTTCCACGGG
TGGTGAGTCTTCCATTGATTCTTCACGGGCAGCATAGTGAAAGCACGGCGACGCACGTCC
CGTCTACTCATGTCACGCGTTCACACATCGCCGCCCCGCGTGCCACCCGCCCGCGGCTAT
ATAAGCCGCCCCTTCCCTCGCCGGTGGCCACAAACCTCTCTCGCCACCGATGAGGAGGCG
CCCGGGCCTTCTGTTGAACGGTAATAGAGGGATTGGTGGAATAGTTGTTGTATTTCTTGA
GCCCCATGGACATATATATAGGAGTACATGACCATCTTGGAGCACAAGTCAAGGCAGGAA
CAAATCCTAGTCTATCAATGTTTTCCTAAAATATCATGTTAGTCAACATCCCCCCGCAGC
CACAACGGTAGCGACGCAAATGGTGAGACTGGAGAAGAATACGAAGGTAAGCCAACGGTC
ATCCCCCCACAGTCGTAACGGTTGATGCATTGCGGAAGTTGTGGCTGG