Contig Data
morexGenes
Links



Map Locations of contig_162600 (2713 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_162600

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23590 1 644 bp MLOC_23590.1 Available Available None





CDS Structure of MLOC_23590






Contig Sequence (2713 bp)

>contig_162600 2713 assembly3_WGSMorex_rbca.fasta
CTAGTTTAAACTAGTGTCATCCACTCACAATTCACCTTGATTGATGAGATTTTAGATTTG
AGCCCTATAAACCGGAAAGGAGGAAGTAGCACATAATACTATGCATTACAAATGTAGTAT
CGTACACTAGTATCATATGCATGATACTCAGGCCCGGTCCTGGGGCAGGGCGAGCGGGGC
GGCTGCCCTGGGCCCCCGGATCACAAGGGGCCCCAGGATGTGTTGTGCATATATGTGACG
AAGGAGCCGACGAGTTATGGCATCCGTTACTATTCGATCTTTTTTCCTATGTGATTTACT
ATACAGCTAAGCCAAGGTGTACAAAAGAATAGAATGTGGTTCCCTACTCACATGGGCCGT
AGGCCTTTTGCTTTGATCCATGACGTGAAGGGGTAATTTACCTGATCTTTTAACTAATTC
TCAACTGCTCAAGAGAAAACTAATTCTTAGAAACTAAAAAACTGATCTTTTAACTGGGAG
AACTGGGTGGGCCAGATGACAGCCACAGTGCTAGAGCTACTGATTAGAAGGAAAAAAACA
GTAGTAGAGCTGCCGCACAACTTGCCCAGAAGAAGAAAAAACTAGTATAGGATCAGCCTT
TTAGATGAGATCGTATGACCAATCCAAAAAAATCATAATTAGGAAATTCAAAAGAATGTA
TAACATTCCTGCAAGGTATGCCTACAAATTAAAAAAGAACAGCTCAAAACTAGATCTATG
GTTGGAGATTCGAAAAAGACAAATTCGACTACGAATAGTGTGAGCTTTCAGTAGAATAGT
ATTTGACACTATTGCAATCTTTTCTTTTTTCTTTTTTGGTCCTCTAAGTGTAGTTCGAAT
TAGGTGCTGAAACTTTTTGAGCTTGTACATCACACATGTATGTGTGTCTTCAAAAAAATT
CAGAATTTTTGAACATGTTTTATATCTTCGAAAAAATTGATCTCGTTGATCACACATAAG
GACATATCCTATACAAGTCTTCCCCGCGACTTTGCATATAGGTGTGTTAGAAGAAAGTTT
TAAGTTGTATAAGTTATTTAATATCAATATGGCTTTTGTTCAAACTTCTAACTGTACATA
GGGTCATTTTATATCTTATTTGTAAATTATTATTTTGATATGAGGATACTCGGATTTTAG
TTTTGTCCTGGGCGCCTCAGGACCGGCCTTGATGATACTTCCCATTACAACCAGCCTAAG
AATTTTTTAGTTGGGATAAAAAAAATCCTTAGAACTTTTTAAACAAACAGGGCCTGGGCG
CTGCAGAGATTGCTTGCCAAAGGCCGGGACACATCGAGTTCTACAACTTGTGTCCTCGAA
AACCGAAGCAGTGGGATCATTCCCCATGAACTGACCTGGAGCCGCAACGTCAGTGGCGGC
CGCTTCACGTCCCAACGGACGCGCCCATTGCAAACGACGTGCATTTCATACGAAGACCAG
CCTCACGTCACACCTCACTCACCACCCTCTTCCTTCGCCAGCCAAACCATGGCAGCTGAT
GCGGACTGGACCTCGCTCCCGTGCGACCTCGTCCGCCGCATCGCCGACTACCTCCTCGCC
GCCAACGATGTAAACTACTACATGGACCTCCGCGCCGTCTGCGACAGCTGGCGCTCCGCC
ACCGACGACCCCAAGGACAGCCCGGACGACCCTCGCTTCCGTCCCCGGCAGTGGTTCGTG
CTTCAGGTTGCAGGCGGGGCAGGTTGCAGGCGGGGCGGGATGCGGCTGCCCGCCAAACAA
CATTGCGGGTGCCAGCATTTTTAGCGGTCACCGCTAATTGCCCGCCTTATGCCGCTTGAT
TTCTTGCGGACAATGCGGCAGCTCGCATGATCCCGCTATAATTCCGCCAAGCTAGCTACT
ACTTTCCACTAACAAGTCTGAAATACAGCCCGCCAAGCTAGCTGCTTCTTTCCACTAACA
AATCTGAAATACAGACTACAGAAATGCTGCTACTTTCCACTAACAACAATGTGCAGGTAC
AAACTTTTTGTCTCTAATCTCATGACAGCAACGTCTAGATACAGAAATGCACAAGATTAC
TTGTCAAGCCATAATCTTCACATCCAGTAAACCCAACAGGATTCTTGCACAAATCGCCAT
ATGAATCTGTGAGGATAATCGCCATATGAACATCCAGGGTAATGTTCATAATACTACACC
CAGGATTTTAACCACAACCAATACAATGTAACTTTACACAGCAAGACAACAAAAACACGG
GTGGAGAGAAACATCAGCTCGATGTCAATTCGAAATCCTTCCAAATCCATCTTCTGTGTG
AGCACTCAACGCATCATCAGCTTTCCAAGTTCCTTCTGATTCATGTACCTGAGCAGAACA
AGGGCATTTCTTCAGGTTCCTAACAAAATATTGTATAACTTAGCATGAATGAAAGGACAA
GCACGAGAAAGTGCATCATCAGCCAAGATTCATCATCAGCCATTCAACAATGCAAACCGC
TGCCCAGTTCTAAGATTCCAACATATTCAAATAAATAAGTAAAAAAATGTAGTACCTTGC
ATTGTTGCATATTCAAACAATGCAAACCGCTGCCAGTTCTTACCGCGAGGTCGCAACCAA
TCTTGTAGACAGATTAATGCCTCTATAGTGGTTTCTACCATTCTGGTCCTGTAGTCACTG
AGTATTCTTCCTCCGNTGGAGAAGGCTGACTCTGATGCTACAGTAGATGCAGGTGCAGCC
AATACATCCTTTG