Contig Data
morexGenes
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Map Locations of contig_1625435 (2544 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_1625435

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23565 2 905 bp MLOC_23565.1 Available Available LOC_Os04g41510.1, FRAME:-3, EVALUE:3e-135, 13104.m04074 protein serine/threonine-protein kinase GCN2, putative, expressed





CDS Structure of MLOC_23565






Contig Sequence (2544 bp)

>contig_1625435 2544 assembly3_WGSMorex_rbca.fasta
AAGAACGAGCCATGGACAGGGGTGCGTGGAAGCTTGTTATCCATGTGCCAGAACCATGAG
TTGGTCGCGAGATCTTATGGGTTTCANCTCTAGCCTACCCCAACTTGTTTTGGACTAAAG
GCTTTGTTGTTGTTGTTGTAGTATTCGCTGTTAGCTATACATCATTGTACTCACTAGCAA
TCTCTTAAATCTCTTAAAGTGAAAGAGTGAAACCAATACACAAGACGCACATTCAAATTT
ACTACACTAGTCTGGAACAAATGGTTTACTACCATTCATTAGAAACATTTCCATTCCAGA
AACTGTTAAAGAGTTGTATATGCTTTCCATGAGTTAGTTGTGTAGTATGCCCATTGTATA
AAGGGTTTGCCTATGGCCTTATGGAAATACAAGTTGCTATCAGCCAATGGCCTTATAGAA
ATACAAGTTGCTATCGACCTATTGCCTTGTGGAAATACAAGTTGCACATTTGCATACTTC
CTCACATGGTATCAGAGCCCTAGGTTTTCTTCCCACCGCACCAACAACTCCTGCTCTCTA
ACTCAGGCAGATTGGTTTTATCTTTTCTCGGTATCATCTCGATTTCTATTTCTGATCGAT
TCTCATGACATCAATTACCCTGATCAAGTTTGTGCCCAAGTTCCCCTATCACTCCATCCC
AACCCTGATTTCCAGATCAATTCCCCTACACAACACCCACCCTACTTCTAAAGGAAATAA
GAAATAAAAGAAATAGATCTAAAAGTTGGGAGCAAATGTGATGTAACCAATCAAGGCATA
CACACACTCACACAATTAAATAAGGGCTATTGCACTAAAAAAACAAGTGTGTCACTTGTT
ATAGACCTGGTTAGCAGCAACGTTCATAACAAATGGTGTTCGCAGCTCATAGCAAAGTTC
TAGCATCTCTCCTCCTTGCGTTAGGATCTTCACTGTCTTTCCACTACAAATTTGCAAATA
ATATAAATGTCAGCACAGAGTAGTTGTGATGGAACAATCACTAGTTTCTATTCTACGTAC
ATTAAATATTCATAAGGTAAGTGGACTAGAATTCAAACACACCTATTTTCAGTAAATTTC
CCATCCAATGTATGCAAGGGTGTTATCTGGAACCTTTTAGCACAATGTCGCTTAAAAACC
TCTTTGCTAACCTCAATAATGGAATCCAAGAGTTCACTGTTATCATTTTTATAAGTGGAT
TTTTTACTGCTTTCATGCTGACATTGCATTTTGGCGACCAGTCGATCTTCATTAAATATT
GTAGATATAACTCGATCATAAACGTAAGTGTCTTCTGGTGTCTGTATCATTCTAAGTACA
TCTGCATAAAGTGGACAAAGGCAGACATAATAAGTAAAAAAAGATTGAACTGACACTTCA
AATATATTCAATATCCATACACAAGAAAAAGGCTGAAACAAGTTGCCTGAAAGGTCCGTG
ATGATAATAATATCTACCAATTTATTAAATTACAGAGCATACAAACGAGCACCATAGAGC
AGACAAACAGTCCATGTTTGAGGCTTTGAGCAGTGCAATTGCAGTCAGGAAATCAACAAA
GTACAAAGCACAGTTCATATTTGGGCAACTGTGTTGCCCTAGTAAAGTTTTTTTTTCACC
AGTTGTAAATTTTGCGCCGCTTCGGTGCTCTTCTTAATACAAAAAGACACGCAGTCCAGT
GCTTCCAGTGCGTGTTACTACACAATATAGAAGAAACTTAAAACATCGCCTCATGATCTG
TTCTTCAAATGGTACGACCTAATGTTAATGTAGAAAAGCCAAAAGCTTACCATTTAACCA
CTCGTCCTCCATCCGAGGAGGCAAGTCATTTTGCAAAAGCTCAATCGCAGATGGACGTTC
GGACGGGCTTGGACACAGCAAGCGTCTTAATAGATTTGATTGACCAGGAAATTGTGTTGA
CCATGATATTGGAGACTCGCCTTTCTGTTTAAGATCAGTGAGAACAAGATGTCTTTCCAT
TGCTGTTGAAAATGGATGCCAAAGCTCAAAGAATATAACACCCGCACTGTACATGTCAAC
CTGAAAATAACCAAGATAAAACCCCAAGAAGTTTAGATAATACTACAACTGGTATTAAGT
TGATATTATCAACAAAGATATATCTATTTCTTAATTTTTTTAAATGAACAAATTAGAAGT
CTACTCTGACCTTTTCGTTTATCTGTGGCCACTTCTGTTCTACCTCCGGTGCAGTATAAA
AATAGGTACCTACTTGACCTGTTCCATCCATTGAAACGCCCATTCCTTCAGTAGGAATAT
ATTGGTCATGATCCAGCTGCTCCAGCTTTAGAAATTTGGCTGAAAAAATGATTAAAATGA
AGTCAGTTCAAACTTTCCTCACTAACCTAGAGTTACACTTCACATAAAATAGGGCAATTA
ACTACTAAGTACTCCCTCAGTTTCTAAATATAAGTCTTTTTTAGAGATTTCAATAAGGAC
TACATACGGATGTATATAGACGTATTTTAGAGTGTACATTCATTCATTTTGCTACCTATG
TAGTCCATCGTAATAACTTCGTAT