Contig Data
morexGenes
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Map Locations of contig_1624127 (1708 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1624127

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23502 1 434 bp MLOC_23502.1 Available Available LOC_Os10g07614.1, FRAME:+2, EVALUE:9e-19, 13110.m07682 protein retrotransposon protein, putative, unclassified





CDS Structure of MLOC_23502






Contig Sequence (1708 bp)

>contig_1624127 1708 assembly3_WGSMorex_rbca.fasta
GGTCTCCGTAACCAGACCCAGGAGTTTACCGAATGTTCCTACCACCCTCGGACCGAAATT
CAGTGAGTAATAGCATGGAAAACTGGCCAGAATGGAGAATATCTGCGAGTTTTGACGAGG
TATGTGTAACCGGCCCCTAGATTTCCCGGAATGTTCGTATGGCCCCGGGACCCAAAANNA
GTGAGTAATAGGATAGAAAACTCGCGAGAATGGACCAAATCTACGAGTTTTGATGAGGTC
CCCGTAACCGATCCCAAGAGTTGTGGAACGTTCGGATCGCCATCTGCGAGACTGAACGCA
ATCTGCGAGTTTTAAGAGGACCCCATAACCGGTCCACGGAGTTCGTGGAACATTCGGATC
GCCCCGGGATGCAATCTCAATGAGTAATAGCATACTAAATTGGCTACAATTACATCCAAC
CCTTTCTTTCCTTGATTTATGAGGGCAGCTAGAAAAACCATTGATGCCTCGGCTTTCCTC
TTCTTGGTCACACCTTAATAAGCTCACTCGGTTGGACCTGGCATTTTCCAGTATTGATGA
GTGAACATTTCCCTGTCTGCTTGTGTTATGCGGTCTATGTTTTCTTAACCTATCAAGGGC
TTTTGAAGGGAAGAGGTTGAATTTATGCGCGGGGTCATTTCCAAAACTTAGGGATCTGTA
CATATGGGGCGCACCACAACTCAACCAAGTGGAAATAGAGGAGGGCGCAATTGAAAACCT
CGTTGAGCTATTGTTGGTAGACTGTCCTGAGCTAAAGATTCTTCCCGATGGCATTGAACA
CCTTGCAGCCCTTGAAAAATTGCATATATGAGGTTCTTACATTAGTTTCTCGGTGGAAAT
TAGGGCTCTTCCTTGTTACTACTGCTATATATGAGCTATGTATCCTGCTTTGGATCAAAG
ACAAGTAAGATCAAATGTAGATATATATTTCCCGCGACCTGACAATATCCTAGCTGCAAA
GAAGAAAAAGAAGCACGAGTCGGCGTACTACACAGTCCTGAAGTGGAGAACAATGCCAAC
ACATGTCGTCTTATTTGAAACTACGATGTGTGCAATGAATATTCTGCCCATCAGTTTTTG
TCGCCTAAGTAACTACTTCCTTTGGCATTTCTAGCTTTGCTCAGTCATTACTGAGCAATA
TACAAGTATCTGTTCCTCACTATTCAGCAGGTGTATGCTACAGACTTTGTTCATGATAGC
ATGATCATATTGTGAACTATTTTGCTGTAAATTAAAGACTGCATTTGACGAATTGACGAT
GAAATCAGGGAGCTGAGCTTTGCTCTGTCGTCATATTGGAGACGGAATGTACGTAAGTTA
GATTTCCTGTGATGTTGATTGAATATTCATCCAATATTGCAAAGTTCCTCTGCTTTTCTG
AGAAAAGGAACACACAGTTTTCTAAACAAATGCTCCCTCTGTTGTACTAAATCAACGACA
CTTTTTCTAGAACAGAGGGAGTACTTGTTTCTATGAAAAGGAATGGAGGTGCTCTTTTTC
TCATCTGTCCCATCACACGCGGGGAAATCCTTCCAAGGAATTGGCCTAGTGTTCATACAT
ATAATTGTACAAAACTGGCGAGAATTGACCATGAGGTTCCTGAAACGTACGGATCGCAGC
AGGACCCAAAATTAATGAGTAATAGCATGGAAAACTAGTCGGAATAGACCAAAACTGCGA
GTTTTGAAGAATTCCCCGTAACCGGACC