Contig Data
morexGenes
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Map Locations of contig_162210 (3047 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map location




Predicted Genes from contig_162210

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23395 1 1980 bp MLOC_23395.1 Available Available LOC_Os10g26560.1, FRAME:-2, EVALUE:2e-176, 13110.m02264 protein expressed protein





CDS Structure of MLOC_23395






Contig Sequence (3047 bp)

>contig_162210 3047 assembly3_WGSMorex_rbca.fasta
ATGGCTGTGAAATGATTCATAGATGTGGAAAGCGTACCGATGGCTCAGATCCTGGATCAG
AAGCATAGGAACTTGATCTTGACCTGTTCACACTTTTTGGATACTTGGGGCTGTATGTGT
CATCATGTAGCACTTTAGTCGCAAAAGTAGGACTTGCAAAGTGATCTCCCATGTCTCTGA
ATCTGTCTGCCAATGGACTGGCAAACTTCTCTCCAAGTTTACCATTTATCTGGGGACTTG
CCTCATTGTCCCATGGGTACATTTTTGCTTCAGGTGATGGACTAGCAGCACCAGATGGTT
TACCATTTATCTGGGGACTTGCCTCATTGTCCCATGGGTACATTTTCGGTTCAGGTGATG
GACTAGCAGCGCCAGATGGTTTACCATTTATCTGGGGACTTGCCTCATTGCCCCGTGGGT
ACATTTTCGGTTCAGGTGATGGACTGGCAGCTGCAGCACCAGATGGTGGCGACTTCAAAT
TATTTCCCACTGGTTTATGTGCCTGAGGGCTTCTGACTGAAGCTTTGCTCAAATTAGAAT
TCTCCTTCCGGTGCGGCACTGAAGAATAATTTTCCTTGCTCTTTGATGAAATTTTCTGCG
AAGAGAGCTTATCTTCACCCTCATTCAGTGTCTTGGGCAGCAACTTCTCTGACAACTGCA
TCTTCTGAGGCCCAACTTTAGCCATTCCATTCAGCCGTTTCTCCCTTGTAGGGCTTCTAG
AACGGCTCTCAGCAGTTTTTCCAGTTCGGGACAAAGAGGAAAGGGAGGTGGTTTTCTCTC
CCTTATTCTCTGATGGTGCATTTCTAGAAGATAGCTGTCCTCTAGCATCCTGTGTGATCT
TGTCAGAAATCGTGTCAGAACAATGGACCTTCTTAAGCTCTGCTTTAGCCTTCCTACTTG
AGCTTCTAAGATTTCTCAAGCAGCCAGAGTTACCATTTGCAGATTTCCCCACGGTTTTGG
GTGTGCATTTCTCATCAAAAACAAACACGCTGTCCAGTTTTTTCTGCTTGGGTGCAGAAC
GTGAAGTAGGCAATGGTTTCTTTGCACTCTGGCTCTTATCCTGCTTCTTGGAGGCTGCTG
GTGCTTTCTTGCGACCCAAGTTGCGAGTAACAGGCCTTATTTCAACTACTTGTGGAGTAT
CAGAATCTGACTCAATTGGATCAGAGGATGGTTTGCTCTTTGCATAGGTAGCTGTTTGAC
AGTTGAGCAGATCAGGTGTCTTGATAATATCAGGAAAACGTGATGTGTAAACCTTCTTGA
TCCCTAAAGATGGTACATTGGTGGTTAGACTTTTAGGCTGGTCAGGTGTCTCAATGTCTT
CAAGGTTTGGTGAAGCAACAGCCTGCTTGGTCTGTGATGTGCCAAGAATCCCCCACAGCT
TCATCCTGAGAACTTCACTGTTGGGCTTGGTCTTATCTGCAGATTCCACTTGGCACTTTC
CTTGTGAATTCACAAAGGCTGTCTTCTGCAGTTGGTCAAGCTGGCTGCCTTGTTCTTTTC
TTGTTCCAAAGGAAAAGGTTCCGGTTTGCTCACGTGCATGGTCATCAGGTTGTGATAGAG
AACCCCTAACATGGGCGGCTTCAGGTGCCTCTGTAGCAGATCCGCCATGGTTTGCAGCTT
CTTGTGAGACCCGGAGTGAAGCATTATGACCTTTCGCTTTTGGGGGTCTAGATCTTCCAT
CAGTTCCTTGAGATGGGTTCCTCTCGAATGCAGGGGCAGCAGCAGCAGCAGCAGCAGCAT
CTCTGCTTCCTGATACAGAGCCTGTCCTTGGAATAGGGATGCCAATTGATACCTTAGGAA
ATTTACCAGATGGATACTGGTTGCTGGCCAAACTCCAGTAATCACTTGATGCAGCCTAGA
CACATGATAATGCATGAGTTGTTAAATAGCACTAGTGTGAAACAGGAAGCACGTCCTACA
ATTTAGCACAGGAAGGAAGTTGCTACTCACTTTCTGCATATTCGGCAGCACGATCTCCGT
CATTGCAGCTTCCGGGATAATAATAGACCAAATTAACCAGAGTTAAAGCTGGTAAACAGG
AGAAGAATAGCGTTAGGTAATGTTCCACCAATGTTAAAAGCATCTTTTATTTAGGATGAA
ATTAAGCTCCACAGCGATGTATAAATATAATATATGCTATAAACCATGCCTGAGACTGAG
ACCAGATTTAGAAACGAACATTAACACAGAAAACAGAAAGTGTGCAAGATACTCTTGTCA
AGTGTAACTTATGCCAGGTCTGAATTGCTACATATGCAGTAGTAATTAAAACGAGTCAAA
TGGAATCGGCTGCTAGCTGAGAGCAAGAGCATACCAACCAGATGAGACTTATCCTAGCCT
GAGGAATACCAGCTAGGATAGGACTCACTAGCCCCTTGCAAGCATATTTGAATCAATGGC
AGATTAGAAGTGACAGGCGCAATGAAACTGCGTTATACACATTGGGCTAAACGTGGTCTA
AGCATTCAGAGATCGTCCTCCGATCCACAGGCAATATATGACATACAGCTTGGGCCGTCA
GATAACTTATAACTCGGGAAAACGCTGGGCCAAAGCAATGCTAGTGACACTGACGCATTT
GCAAGGCTTGCGGCAGCCAGCCTAACCTGACCCAACCCAACCCAACCCAACCCAACCGCG
TGTACGGAAGCACTCCAACAAGGAGATCCATGGAAGATGTATCACCAGATCGGGCGCTTG
ATTGAGCAGCAACGAACTGAATATGGAACCGAGCGAACCATGCACGGCCAGATCAGACGA
CGTGGGCGGGCAAGACAAATTCGCGCGCGACGCGATCGGGGCGAAACCGCAGCATGCAGA
TCAGGAAAGGAAGTCCACTGGCGCGCCCGCGCGCCTGTAAACCCTAGTGAAACCTTGCGC
GCGGGAGACCGTGGTGCGCGAACCGGGGCCAGTCGAGCCCACGGGGGAGTGGGAAACCGG
TACCTCGGGTTCGACGGGTGTCTCCGGCGTCGACGTACGGCCGGTCCGCGCTCGTCCGCG
CGCGGGGAACCTTGGCGGCCCCCCCCGGGGGGCCGCGCGGCGCGCGC