morexGenes - Barley RNA-seq Database

Contig contig_1621996

Source Contig contig_1621996

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1621996 (2092 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1621996

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_23389	1	588 bp	MLOC_23389.1	Available	Available	None

CDS Structure of MLOC_23389

Contig Sequence (2092 bp)

>contig_1621996 2092 assembly3_WGSMorex_rbca.fasta
AGGCCTGCAACGTCCAGTAGACTGGCGTTTCACATAAGGCCGGCAACATCCAATGGACTG
GCGTTTCCTTATCCGTCTGCAATGCCACGGTTTCTGGCGTTTCTAAAAGGGTCAGATCGT
GAAAAAACTTTCAATTCGAGTTCACTGTGGTTTCACACAAGGGCTGCAACGTCCAGTAGA
CTGGCGTTTCACATAAGGCCGGCAACATCCAGTGGACTGGCGTTTCTTTATTCGTCTGCA
ATGCCACGGTTTCTGGCGTTTCTAAAAGGGTCAGATCGTGAAAAAACTTTCAATTCGAGT
TCATTGTGTGCATTTTTTTCGTCTCGTGGGTCAAAACATTGAAAAAACCCGTTCTTGTGT
TCGTTCAAAGTAACAGCCAGCCAGCCAGCCAGCAAAATTTGCAAGACATGCCATGTACTT
CTGGCACCACAGGACCAGCATGTGCATTTTCCTTGCAGAAGACAGTGGACCTTATACAAG
TTAGCGTTGACTGTGCAATAGTGAATTTGTACTGGTTATTTGAACACCCGGACAAGTCAA
AGTCAGGGAGAGGTGAGAAGCTCCTGCTTTAATTTTGTGCTGATGTCTATCTAGTTAACA
CTGACATATACCTAGAACCTTATCTAAAACCATTACAAAATTAGTTTCTGCAAGCACCTC
GCCTAGTGCCGTTGCATGGAAAGGATTATCAGTGTGACTCTGAAGCCTAGTAGGTGCAGT
ATCAGTGCTCCTCAATGAATGAAGGAGACATTGGGTCATGCCTTGTGGCACACATTTAAT
CGGCAGCACCATCTGGATGATACATTACACGTGTAGCTGTCCTTTGATGATTTGCATGCA
TGCATACATGCTGATGATATACTACATGGAGATGGAGTGGCATCTTTTTTGTTTTTCGAA
AAGGAGGTTGGCATATATCTTTCCTTAAAAACGATGCGATTAACATTGCATATGAATACA
TAATCTCTTAGGTGGTCCATGCACACCTATCTTTTATAATTTTAATGGCACTTATTTATA
GTTATTTGAATATAGACGAGTATGCTATCCTAGTTGTAGATATTTGAAAGTAACTGAATC
AGCTATGCAACTATAGGAGTGACCTGTAAAACAGAATATGACCTCAAATATTTCAGGCCA
ACTTTCTTATATAGCATAGAAACTTCATACAGAAACATTTTAACTAAATATTTTTAGGGT
AAGTAGGCATACATACATTAATAAACATAACAAAACATTTTATGTAGGTGAGGTCATCTT
AACCTTCCATGTAATCCCATTGCACGCTCTAAGAGGGCGGTTAAACTCAATTGTACTTCA
GTTACATCACATAACAGATGCTATGGAATCCAGCAGCCACATTTTACTTTGATGCTGCCA
GGCTAGTGAAGTCTGAACATCCATAAAATGAAATCAGGTAAGGATGATGTATGATAACCA
CTGGACATAGCCAAAGCCTCCTCAATCAAATTTCTGAATCGTAAATGAGAATCATAACAA
GCCTCAAATTTCTGAATCATAAAACAGAATCATAGCAAGCCTATGATCTGGATTAAAATT
CTGAATCGTAGAAGAGAATCGTAGCAAGCCTGTAATTAACATCAATTCCCTCCAAAAGTA
CGTGAAAGCTTCTATCATTTGGTAGAAGAAACCAAATTTAAATTTACAACGGCCTCATAA
GATCATGATATGCTAGGTAGATTTATAGACCCATGAACCACTTAATCGTATGGTTGAATC
GTTGTATGCTACAGAAGTATTCTTCAAGGGACACGTTCTACAATCTAAAAAGAAAATAAA
TATAAATATTCAACAAGATAGTTAACTCACATATGAAATAGTACAAAGAAACTACATAGA
GAAGGAAAATAATAGAGCTACAACTGCATGGACATATTGATAGATTGGTATCACTGAGAT
AAGAAATTCTTCCATACATCAAGTTAAATGTAGACAAGAGAAAAATGATATGAGAGACAA
GCTCATCACTGCCCAATCCCAAACCTCAAATAGAGGGGGGCAGCCCGGTGCATGTAGCTC
CCGCTTGTGCAGGGTCCGGGGAAGGGTCCGACCACTTTGGGTCTATTGTACG