Contig Data
morexGenes
Links



Map Locations of contig_161999 (3915 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_161999

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23271 1 1960 bp MLOC_23271.1 Available Available LOC_Os04g46892.1, FRAME:-2, EVALUE:2e-179, 13104.m04737 protein WD domain, G-beta repeat domain containing protein, expressed





CDS Structure of MLOC_23271






Contig Sequence (3915 bp)

>contig_161999 3915 assembly3_WGSMorex_rbca.fasta
TAAAAGATTTTAGCCTCAAGACTAGTTTTAGCCTCTCTTTAGTTAGGGGTGCTTGAAACT
TTAGCCTCTTAAAGAGACTAGTTTTAATCAGGCTAGTATTAGTCTCTTGAATCCAAGCAC
CCTCTCATCCGCGTGCTTCGTTTTCCATTCATAGCAGCTTGCTACGTAAAACATAAAACA
AATTCAGTAGTCTAGTCGTTCAAATGACAAGCTGAAAAGGTACGTGGGTGGGCCATGTAT
GTAAAATAAGACGTGGACAGCTGGGTTTGAGAGCTCATCACGTCGCCCTTTTTAAAGGAA
AAAAGAAATCATCACGTCGCTGTCTAACCACTAGATACGTCCGATCTCGTAGGATCGAAC
GGATGATTAGACTAATTTCCTTTTGAAAATCAGCCGGATGACAGGTAGTACCGGCCATTT
TGTACAGAGTAGGCAGTCGGCCTGGCGTCCACGTAGGCACACCGTATTACACATCCGAGA
CAAGTACCCAGAGCAGAGAATTAGTAACATTCAGGTATTTGCTTCTGAATCCCTTGGCCG
CAACACAAAGACGGTCCCAGATCTTCTCCACGGTATGGCGTGTTTCACCACGTGCGAGAA
CAGCAAGGTCCATATATACAACCAAAAGCGAAGTCATCTGTACCGATTCACCGTGACGCA
AAAGCGGGCTCATGTTGCAGCTCCTCTGTTTTCTGTACAGATGCCCTTTTTGTGCCATCT
TCCCCAAACATCCTATGTATCTTTCACTGCAAAATTCGCTGGAGCTTCGGTGAGCAAAAT
AATGTCAGTCAGCGGTGGTTCTCTCACATGACTACAAAAGCCCGTCACCTTCGTGCAACA
TCTGATCAGCTATTTTAGAACTTAACTGCAATGTTCAGACAAGTTAATGTGAAAATTAGT
TGCAAAGATGGTCATTCTATGTGCAACTAAGCCCTGAAAATACGAATACATGCTGATGAA
GAGATAATCGATAGAACATCTGTCAATCAAGCCTTGAAGACAGCTAGTGAAGATAAATAT
AGCACACACAGAATACTTACAGAAGGATTTGTGAAGACTATCAGCTGCTTATCAGCTGTT
GAGGCAACAAGGGTAGTGTTATCTTCATTTAGAGCAACAGCTGTGACGTCTTGTCCTTCT
CCTAGCTTCAGCGTATGAATTACCTGACAGGATACCCCTTATTCGTCAGAGTTTTGCTCA
TAGGACTTAAGTTCAAAAGTTTTCTCTTAGTGCTCACCTCAAGTTTGTGCAGATCAATGA
AGCAGATCGAAGGCACATGAACATATAGCCTGGTCTCCTTTGACTCTGGTACATCCTCAT
CATCGTTGCAGTTCTCAATCATATGATCTTCATCAGTACTAGTGTCACGAGTGCAATTGC
TAGATAAGCATGCTGCAATCAAAGCAAACTGGCCATCCCTAGAAACCTCAATGCAACTAA
CACGCCCGGAGAAAGGTGACAGAACAGAGGTAGACATAGGGATTCCATTAACGGTGAAGG
TGGATAGTCTCTTCTCTGATTCATTCCAAATCAATACAATTCCTTGAGAAGATAAGCATA
TCAAATGTGCCTCTCCCACGTCCAGCTTCCTTATGAGCCGACCTGTCCTCAAAGAATGTA
GGAGAAGGGCACCAGATGTATGTGAAGAGGAAGCAACAAGTCCCAAGTCAGAACTAACAG
AACAGCAAGTTACTTCTCCAAGATGCCCTCTTAGAACATGCATAGGACCTTCGATTCGCC
GCTTCCTGGAGGTTTCCAAAGTTCTGATTGTACTGCTACCACTACTACTACTATTGGCTA
AAGGACTACTTGGTGTTGTTGGTGAAGGTGGAGGTTCTGGAGCATTTTTCCAATGTGAAG
AGCTCATCTGGTGTATCCTCCATAATATAACTGTTGTGTCACGAGACCCTGTGACAAAGT
AATTGTTATCTGGAGATAGTGCGAGACAGGTCACAGGAGCAATATGCCCAGATGCAGTTT
CAATGGTCCTTGCTCCATCTGGGGAGATCAACTTCACAGAATTATCTGCATGCCCACCTA
CAGTCAAAGAAAAACAGGGACATTAGAAATAATGCAGGAATGGAGCAGTCTGACAATATT
TCATATCATAAAGACGACTATTTGACGTAAAATGATAGCATAAGAGCAACATACTTCAAC
ATAATACATTTTTTTCAGGAACTAATAAGGAAACTAGTTTTTGACACCAGATATCATGCA
GATACTTCAACATAATAAGAGCAACATACTTCAACATAATACATTGTAATGTGTCACTCT
GGATATCAGGAATCATCCAGAAAAGAACTAGGAGGGCTCAGTACAAAATATCCGCAAAGA
AGACTAGTTTTCAGACAAGTATCAATTAGTGGAAAAAACGAGAGCTTTTAGAAAAGGAGA
AAATAAGGTTAGAATACAATAATTACCAGTTATAACCTCTTTGTCGCATGTGACGGCAAC
AGTTGATGAAGTTTGGATTGCAGAAGCAGCAAAAGCTACAGCCCTCGGGAAATGGTAGTC
TTCTGCAGAAGCAGGTCCTTTGAAGATGCGCCTTATTGCGCTGCCGCTTGAATTTATGGC
ATTTTTTCCATGATGAAAGAGAAAAGGTGTCTCTAAGCCATCTGGGGCGTTTGGCTGCCA
ATGGTGCACTGCCACATGTGCTGCAGGCACATTTGCATCTACGACTACAATACAGTCATT
CGATACAAGCATTGCACTAGCAGGAACATTACACTGGTCTGGATTAGGAAGTAAATAAGA
TCTGACTTCACTTGGGTTCCGGAATATTGTCTGCACAAAAAACAAAACAAAAAATAACAA
TCTAGTAATTAAGTCAGGAGAGAAGAGAAAGTATCCAGTGCCACAAGCACTTGGAAGGTC
CCATAATTGGAAAACTGTTTAAGTCATGAAAAGTTCTGATTTTTAATGACACGCAAAACC
AATTATCATGTTACACAATGTTGACAGATATAAATTTGATCCGCACAGTGAGAAACAAAA
GATACAGTGTCAGTCAGGAAAAAAATGGTTTTTTTTTTCCATGGGTTGCCTTGTACTTGA
AGATCCTCATGGTGGATAACCTAACCAAAAGGGGATGACTGCACGAAGCACAGTGTCGAC
TATATTTAAGCTAGCCGGAGACTATAAACCATCTCCACAAAAATGCCCTTCCACTGTGCA
GATTTGGAACAAACCGTGGCTCTTTCCGCAATATCGAGATGAATATTAGTGGGATGAATG
AGAGACTCGTACTGGAGCCAAGAGATAGGTGGCAAGTTCAGGGGCATCCAAATGTATATT
ACATGGGATGTTTTGAAGGAGAGGAATACAAAAATCCCGAAACAAATGGTTGCACCTGCA
AGAGGTGGCCTTAGAATAGTAACATGCTTAAAAGGAAAAGGTAGTGGCTGGAGTTGAGTT
GCTCTCACAGTTACATGGACCGAGGATGAGGAGTAACATGCAACACTGAAGTCAGTTTTC
CATGTTTTAATTGGAGTACTATATGAATTTTTCTCAAGCGCAAGTACTATAGAACTTGTA
ATATGATTTTGTGATTGATATTTGTGTAAAGGAGAGTGAGAGCTCTACCATTGAACTGGA
CGACTCCTTTGATGATACTAGCAGGCGTTTTGTGCGGCGAATCCAGGAGTCGGAGGTCAA
GGAGGCTTAAAAAGGATGAAAGGAGGCAAGACGATGGGCCCATACTGTATCCCATTGAGG
TGTGGAGAGGCCTTGGGGGCATAGCGATGGTATGGCTAACCAAGCTTTTCAAGCTCAATT
TTCGGGCAAACAAGATGCCAAAATAATGGAGATAGAGTATATTAGTACTCCCTCCGTCCC
AAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAAAGTTAAGACAC
TTATTTTGAAACGGA