Contig Data
morexGenes
Links



Map Locations of contig_1619442 (3383 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1619442

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23222 2 756 bp AK355812 Available Available None





CDS Structure of MLOC_23222






Contig Sequence (3383 bp)

>contig_1619442 3383 assembly3_WGSMorex_rbca.fasta
GCATCTAGGGCATATTTCCAACATTTACTTTGTGATAGCCATATTATTTCTTGTTATATA
TCATGCNNNNNNNNNNNNNNTTATCTTGCTTAGCATAAGCTGTTGGTGCACATAGATGAG
CCTAGTTGTTTTAGGTTTTTCGCTTGACTAATTAAACTTAGTTTTACTCAACATTTGTTC
AAGCCTAAATCGTAATTATTTTAAAGCGTCTATTCATCCCCACCCCTCTAGGCGACATCC
ACATCCTTTAAGTATTCCACTTGGCTGACGACCCTTACGAGCTTTAAGGTTCGGCATGCT
GCCTTGCCAATTCTTCTTCTAGTTTCCTTATTCGGTGATATGTGATAAATTCTCCTGTCT
CATGATCATAATGGTACCGTCCCTGACATAGTTATATTCGAGGGGGTCCTTGAATTGCGC
GAAGTGGTTTGGGATGCCCTTTGATGCAAGTGCAGCGTTCTACTTGTCCCATACGGCCTT
CTTCCTAACAAAACCATAGTTGCCGAGGGTGTGGTTACTTAATGTCCTTGATCGCATTTC
CTTCCCCATGACGATTGGGTCATCACTGAGTTCTCCTGATTTTGCATCTTGAAAATGTTC
CAATCATCTACACTAATGGTAGGCCACTTCTACTGGATCTCGGAGATATCTATGTCGGTA
TTCGTTGCAATCTCTTTTCTTGCTACAGATTTCCAAGAACTCAAATTCTTCGAGTACTTA
TGGACTACAAGGTTGTTTACCTGATGATTTCGGTAAGATAGATTGTCATACTCATCAGGA
AACTTGAATCTTGCATGCACCCTTCTTATGAGGAGTTCTCGCAGATTAGATTTGTGCATA
TCCCTTAAATTTGTCTCGTTGATGGAGCAAACTTTGAACATTCAACCTCTCTCAGTAGTG
TTGTTTTCCAATGACTTGAATAAAACCTAAAAAATCTAATCTTCGAATAACAATGCCTTT
TTCATTTTTGAAAGAGAGGGGGGACCATCTCTATAATATATCACCAAGAAACGGATGTTA
TGATATAAACTTGACAACTGACATTAGTCCCAATAACCATAACATCATCAACACCCAAAT
ACAATGAGGGTCTAGATGTTTCAGTTTTGGAGTTTGATCTCTAAGCACTTTGCAAGGAAA
GCTTCACCTCACAATACTGATATCCCCTTTTGATAGTATTGGTATACGTAAGCACTCAAA
GTGATCTTTGATCACTTCAACTTATGGGATTGTCATTGACCTTGGCAACACTTGATCTTG
AATACGGAGGGGGTCAAAAACCATCTTCGAAACATAGTATCTTTTGGGATCGAAGGTGAT
GATGTAGAGAAAAAAAATGTGTTCCTTTAATCTAGTTATTATGAGTTGTAAAACCAACCA
GGGGGTCATGCACTTACCTATGTTCAGATCCCAAAGTTTGGTAACAACCTTAATTCTTGT
GTTCTATCCTTTTGACTCCCAAAAGTCTAGGAAATGGCTAAACTAATATCGATGAGTATG
GTGGTGTGGTGATTTTCTCAATAGAAGTTGTTCTTCCATGGCCTTCGGTTTATTTTATAT
GCTCTTTTTCTTCCAACTAGAGGTCCATTGGTTTCATAGTTTGTAACCAGCTCCCCTACA
AAATGATACACTGTTTCATTTGAACTCCGGATTCCTTGTGATATCTTTATCGAGCAGAGC
CTTTCCACTATACAATAGGGGTAAAATGTTTCGATATATCCCCTTATATTTGTACATATA
TACATATGAAATCTTATGCATGCACGGTGTATAAAGACATTATCATCAATGTCCCTACCT
TACATGATTGTGCATGTAGAGTTGTAGACTCACTATGTTTTCCTTTCTTTAGATATGGAT
ATCTTTGGAAAATATCTAAATTTAGCTACTTATAAACCATGCGCACACGGATTTCCCGAG
CACGCTCCTTCCCGGTGTGTATTTCTTTGCGTGGTTCTATACATGCATAACCGCCAATGC
CAACATTCAACATACATATCAATCGATGGAGAGGCCGTGGGTTTTTCGCTACTCATAAAA
ACCGTTACAGGGGCCAGTTCCATAAAATTGTTGGAAGTAAATTACTTCCTTTGAAAGGAA
AAAAAATGCAAATAGCAGGAGGCAGCCAGCAGCTATTATTCAAAAGGCAGCATATATTGT
TCTCTCTTTGCACCGGTCGATCACACTTGTTCTCCCCCGGCCCCACGTCAAAAGTGGTGG
AGACTGAACCCCAAGGGTCATCCCTAAGCCCCTCCCCTTCGTCTCCCGGCAGTATAAATA
TGGCGGCACGCCCCTCATCGGAGCAGAAGCAGAAGCAGCAGCAGCAGATAGCCATTGAGA
AGGCAAAAGAGGCAGCAAGCATGGCGGGGAAGGTGGGCATGGAGAGGGTGGCGGCGGTGG
AGGTAACCGTGAGGGAGGTGGACGTGGAGCGGGACCTGCCGGCGGTGGAGGAGCTGGAGC
GGCGGTGCGAGGTCGGCCTCTCCGGCGACCAGGCCGACGACGGCGGCAAGAAGAAGACGA
CGACGAAGAAGAAGAGCATGTCGCTGTGCGTGGAGCAGATCGGCGACCCGCTGGCCAGGG
TCCGCCACGCGCCGGAGCACGTCATGCTGGTATGCTGCCGTAGTAGTAATTATTAATAAC
TAATCGCCTTCCTTGATCATGATCCATAGATTAATGCAGGCATGCTTGACCCTTGCTATA
GCTAGCTCCGTATATAATTGGCTCGTGATCGATGTGCATGCGGTGTAATTAAGATCAGTA
GCTACTCGCTAAGTAACTAACTAACTTGTGATCCATCCATGGATGGATATCTTAGGTTGC
TGAGTGTGGGGAGGAGATGGTCGGCGTCATAAAGGCCTGCATCAAGATGGTCAGCCGCGG
CAGCAGCGGGTCTTCTTCTTCCTCCGGCTCTGTGGCCAAGCAGCCGGCGTACGTGAAGGT
GGCCTTCATCCTCGGCCTCAGGGTCTCCCCCTCCCACAGGTACTTTTCCTTCCCTCTTTT
CACACGGCCATGGCGACGCGGTGGCCACCGGCACGCGTGCGCAATGCATGCGCAGCCTAA
TATATCGCCGGTTTTCTTTTATTGCTTGCGTACAAGTGCGCTTTCTCTTCTTGCCTAATC
GCGTCTGGTGAGAGTTTCTTCTTTGAGCAATGGCGTGCTGACGGCGGCCGCGTTTTTTTT
CGGTTGTGTGACAGGCGGCAGGGGGTCGCGACCGCGCTGGTGCAGGCGGCGGAGGAGTGG
AGCCGTGGGCGGGGCGCGGCGCACGCGACCATGGCGACCACGGCGTCCAACAAGGCGTCG
CTGGGGCTCTTCGCCGGCCGGTTCGGGTACGCGCCGTTCCGGCGGCCGGTGCTCCTGGGC
CGGCCCGTGCACGCGCGGTGGCT