Contig Data
morexGenes
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Map Locations of contig_161944 (4600 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_161944

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23221 1 609 bp AK362768 Available Available None
MLOC_23219 2 1241 bp None Available Available None
MLOC_23220 1 684 bp AK360570 Not available Available None





CDS Structure of MLOC_23221






CDS Structure of MLOC_23219






CDS Structure of MLOC_23220






Contig Sequence (4600 bp)

>contig_161944 4600 assembly3_WGSMorex_rbca.fasta
CTTGGATCCAAGCACCCTCTGAGTGTAGGTGTCGGGAACAGAAAAAAATGTGCGAAATTA
ATGGAGCCACGAGGCCCCGCTACGGGCAGCCCGGGCCCACAGGAATACATTCCACCACAG
CCTGTCCATTCATCAACCCCCTTCCCCCAAATCCCACCGGAATCCTCCACCACAGACGGC
CACCGTCAACACCGCCGCCCGTGTACCGCCAGCCAGGCCGGTCGCGCCACCGCTGGGAGG
AATGCAAGGGCAGCTCGAGATCTAGCGATGCATCGGAGTAGACGACCGAGCCGTCGACGG
GCGCCAGCGAGCGCCGTTCTTTGCCGTGGAGGAGCGGCGCGTCGAGGGGAGGCTCCGACG
GTTGGCCTCTCGGGTCTGAACTGAAGGGCAGCTCGGCAACTACGCAGCTAGCAAGTTTAA
GCTTCAAATTTGCCCTAATCAAATCTACTCCAGTACTTAGTTCTTTAACCTGTGAAATCT
GAACTGTACTATTTATGTACAGTATCTACTAATCTGTCTATCTATGATCATGATCTTATA
GCGATATTCTAACTTCTTCGATCACAAAGCATTTGCAAGGTTGATTATCAGCATGTGTGC
AGAATCCATCATGAGGTCAGGCAGTCTTCACAAGATAATCTAGACCTGTTTTCTCTGCTT
AGGTAATGCTGGTCTGTACTGGAATCTGCAGCCGGCTGCTCCCCGGGGTCTGTTGTCAAG
CTCTGCTGAAACAGCAATCTCATGTGCAAAATCGGAACCTACTGGAATCAAACTCGCAGT
CATACGCATGCACAACCGCTTCCAATTCGGCTGCTAGTCAGGAATAGCAACGCAAAACTG
ACCTTCAACCAAGATAACAAAGACCTCAGAGGAACAATTTGGGTTGTTCTCTTGGAAAGA
ATATACAGAATATAGTTGAAGCAAGAAAGTGAACAATACACGAGCTCGAGTTCATCCATC
TAGACAGATTTGACGGTGCTTCGGCATAGATTCCTACCGGCTCCTTAGGGCAGCGAGGTT
AGGGTTTCTTGTTGTGTGTATGTGACGCGAGATTTGGTGTCAGGTTATTCAGATTGATTT
AAGGATGATTTAACCGTGGCGACTTCGACTCAATGGCGCTGGTCATTAAAGGAGCGTGCA
TGAAGACTGTGCATCTGCAGTTAGGCAAAGTGCCAATGGATATTCCAAAATATCCGATAT
TTGTATTCGAGAAAACGCCTATTCGTATCCGAAATATCCGCATCCGAACCAAAATGGGAA
TGGTAATTATCCGTATCCAAATTTGTTTAACAAATAGTAAAACAAATAAATATGGTATGA
GATTTTGACACAAACATGGATTTGAAAGTAGATATATCCATATCGGAATAAGAATATGGG
AGGTAATTTTCAAGATGCTAGGCCCAGTATTTCAATTATCCAACATAAAAACCAAATAAG
TGGTCAAATTTTACTCCGTGTATGATTAAACTTAGAAATTATTATGCAAAACAACATTAT
TTAATCATAAACGTATTTATCATTGACTGATCGTATGCCACAAGTTGATTATTTCATGTC
ACATAGAAATTGACTAATTTACTTAAGCAATAATATATCGCTATTTATTCGTATCCGATT
CGAATCGAGGATACATCAGATACGTATCCGTATTCAAATAATATCCAAGCCGCATTTATA
TCCGATAACATCTGTACTCGCATTCATATTCATTTTGAAAATATGGAAATGGAAGTTGTA
AGAGCATTATCCCATCCGCATCCCATTTGTTTTCACCCCTATTTGCAGTTGATGTATATA
TAAGAATTGCGAATCATGTAACAAGCCTTACATGTTTCTCCATCCTATTAAACAATTGAT
GACTATCAACGAGCAAACTGATTATTGTATCAATCAACTAATCCTACGTGACCCATTTCC
AGTGTCGGCACCGGTCTGGCGGAAAACGTAAACGCCGGCTTTGATGGGCTACCGAGAGAC
ACCGTGTTGCTGCCAAGCATCATCATGGCCACCGCCGACATCAATGGCCTGTCCACAGGG
TTCTCCTGGACGCACAGGAGCCCAACCTGGATGCACCTCATCACGTCACTCTCTGAGCAG
CTGTTGTTCATGCACGGGTCCATTGCCTCCAGCACTGTTCCGGCCGCCCAATGCTCCCAG
ATCTACACGCGCGGTCAATTTACAAAGTTAGCAGCAACCAAGTCATATTGTGCTACCTGA
TTTGTTCAGATCAAGGAAAAAATAACACGCTATACAAAATAACGTGGTTCGTTCAAATAT
GTTATTAACGTGTTATAGCGTTATAACATGCTATTAGCGACTGTCATAGCAATGCTTATT
TTCTCAGTGCTTCAGATGTTGCTTAGCAATGGAGCCGGCAGGAGCTCATGCAGGTGCATA
CCGTGGTCAAGAGATCTTCAGATTGTGAGGTGTCACTGTTCTTCCTTCCCGTCACGATCT
CCAAAACCATGACACCGAAGCTGAACACATCCGATTTCACGGAGTAGTTCCCACGCATAA
CGTACTCAGGCGCCATGTATCCGCTGAAACACGACAAGGCAACATGCATGATGATTACCC
GTTGCTGCGGCTGCATCACCTCGATGCTCTGACGTGAGTAATAAAAGTCGCCCTTTAGCT
CGAAAAGAGAAAAACATGGACTGTACCGGTACTAGATCCATAAACGTGACAACTACTTCC
TTCGTTTTTAAATATGTTGTACTCCATCCGTTCCAAAATATAAGACCTTTTAGAGATTTC
ATTAGAAGGCTACATACGGGGCAAAATGAGTGAATCTACAATCTAGAATATGTCTATGTA
CATTCGTATGTAGTTTATAGTACAATCTCTAAAAGCCTTATATTTAAGAACGGAGGGAGT
ATAAGTCTTTTTAAAAATTTCACTACGACTATATACGAAATAAAATAGATGAATTCACAT
CTTAAAATTTGTTTATATACATACCTATTCAGTTTATAATAAAATATCTAAAAACACTTG
TATTTAGTAACGGAGGAAGTAGTACTTACTATGTGCCGACCACCTCGTTGGTGACGCCCT
GCGTCTGGCCTCTCCCGAAGAGCCTTGCGAGGCCAAAATCTGAGATCTTGGGGTTCATGT
CGGCATCAAGAAGGACATTGCTGGCCTTGAGATCACGATGGACAACTTTGGGTTGGGAGT
CTTCATGAAGGTACTGCAGGCCTCGAGCGATCCCGCGTATGATTCTCTGCCTCTTTCCCC
AGTCAAGCTGCTCCCGTTTCTTGGTGTCTGTCGTAGTTTGCACATTCAGAAAGTGTACCT
GAGCTGTCAGTGCCATTAGAATTCTGAAAGATTACCGAACAGGATCTGGTCCAGGCTCCT
GTTGCAGACGAACTCGTAGACGACTAGCCGCTCCTGTTGCTCTAGGCAGAAGCCGACAAG
CCTGACGAGATTCTTGTGCTTGAGCTTCGCTACCAGGGTGAGCTCGTTCCTGAGCTCCTC
CACTCCCTGCGTCGAGCTCTTGGACAGTCTCTTCACCGCTATCTCTTCGCCGTCCCGCAG
AGAACCCTATGCACCAAATTATGGAAAATATTAGTTTTGCTGCTCGACAGTAGAAACTCA
ACGTATCTGACAGTTTCTTCAAGATCACCACCTTGTACACCACACCAAACCCGCCTTCAC
CGAGCTTGTTGCTTTCTGCAAAGTCTTCGGTTGCGGCTCGCAAAGTAGCAATGTCGATCC
ACATCGAGTCTATGGTCTCGTTGTTCACGGTTTCAGTGGAGTAACTGGGATATGCTGCAG
AAATACAACTTGATTATTTTTTTACGCTGTTTTCTTTCTCATGCTTAACAACTTGATTAT
CAGTTTGCCTTTTCAAGTGCAAAAATTATAGAGGTAAATACACCAGTGGTGTTTGAACTT
GCCATGGATGTTCAGTTTAGTGCATGAACTTGAACGTGCAAATATGGTGCTGATGCTATC
CATATATGTAAAGTGCGCCGACGTGGCACTGTATATGGTTGATGTGGCAGGCATGGATCC
ACTTGTAACAACGAAACTTGATATTTGATTACTTATATGTTTATATGACTAGCGGGCCCG
CCTGTCATGCAAATTAAAATGAAAAATGGTGTAGAAAGGACTCAAATAAATGTAAATAGC
AGCCTATGCTAACCATTATTACGCCAACCCGGTCTTGCTGCCAAGGAAAACTCCCGACTC
TTAATGTAGCCTATATGAAAAAATTGTGGTACTTAAATGGGCTGCACTTAATTCTTTCTG
AAAATAAAAAATATATTCAACCAACTGTGGACTTTGATGCTCAAAAGTTAGTTTTACTCC
TAAAAATGTATATAATGATAGTATTAATAATCTATACCTATTAATAAAGGAAATATGTAT
TCTTAATCCGTCATGCTATGTTATATAAAACCCTTTAATGTTTCTGACATTAAACCCGCA
GTACATATTAAATGTTTTTTAGAATACCTATATATTCTGACCCGGAACTCCAAATTCAAC
ATTTTATATATGGAATTTGATTAGAAANATATGTAGAATCTGAATATAATGTTATTTTAC
TCAGATTATAGACCATCTTTTTGTAAATTAAGAACGTGTG