Contig Data
morexGenes
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Map Locations of contig_1617971 (2956 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1617971

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23142 1 861 bp MLOC_23142.1 Available Available None
MLOC_23141 1 425 bp None Available Available None





CDS Structure of MLOC_23142






CDS Structure of MLOC_23141






Contig Sequence (2956 bp)

>contig_1617971 2956 assembly3_WGSMorex_rbca.fasta
GGGGGGGGGGGGGGGGGGTAGGGGTTATTGCTCAGCAATAACAGACATACATATCCAGGT
TGTGAATATGAATGTAACAACCCAAAAATCGGGTTATCGATTTTTNNNNNNNNNTTCCTT
CCTAGCTTTTCTCTCCCAAACTTTTTCATGTGTAATTTGGCAAATGACCAGGTGAATCCA
GTCTATCCTCAACCTCTCAGTGTTTTTCCCATGTCTTTGTGCCAGCCTGCCCTTGTTGAG
TAAACCCTGAACCTCTTTCAAACCCTCGTTCCGAAATATTGGAACTGGGAATCCTACCTT
TGTGTTTACTAAGGAGCTATCATTTCCCTTGCTTTGTTAATCCTCCCAAAATTTCCAGAG
ATCCTCCTTCCCGCATCAACCCTAGATGTACAAAAATATTGCCAAGTCATATGCAATATT
TCCCATCTAGAATTAATTCCTTTTCTGCCTTCCCGAGGAATTAAATCCAGGAAAATATCT
ATCCATCTCCCAAGGTCATGAAAACTTGTGGAGATATTCTATGTGATATGGAGCTCTCAT
AAAAATATTGGCCATAATTAAATTGGGAAAATTGCCTTTTCCTATTTAAGGCAATATTTC
AATTTGGGGCCTTTCCCAAGGAACTACCATTTTGGTAGCTAGGAAAAATCCCAAATAATT
TATTGAGCTTCTTATATCCATATATTATCCATTTCCATCAAAATATCAAGTTCCACAATT
CAAAAATTGAGCACAACATCCCTTTGCAAATTATGTACAGATTTCCTTCGGCTGAAATTT
TGCAGGGTGATACATTATGACATATTACCCATGTACACCAAAAATCAGCCCATTTCAGCT
AGTAAATCTTCCTAGGTAAATTTCCCAAGGTTGTGTCCAGATTGAAGCACTGTGAAGGAA
GTACCATTTTTACTTATGAAAATGGTATGAAAATTTTACATTGCATCCATATGCCTAAAT
CATTGGTCTCCATCAAATTTGGGCCATTTTTATCTAGCCATTTGACCCGAGCATCTTCAT
TTCCAATTCTGGTCAAACTACCAACTTACAAAGGAAGTACCCCCTAAACTTGTTTGTTTG
TGCTGCATTTGGGCCAATATACTCACTCTAGTGAGTGGTCAACCTCAGGCAGAGATCAGG
CCAAGAGGTGCGCTGTGTTGACCATGCCACTTGACAAACAGTTTGCTGTTGGAAACTGTT
TGACCTTGGTTCACTCACACGAGTGCTCTCCCGTGTCTTCTGGATGCATAGATCAACTCA
GTGAAGCGTGGATAAGACGCTAGACACCTTTTGGCAGCGAGTGGAGCGTGGCACTGCCGT
GGCCACGCGGTGACCATGGGAAGAGCGTGACAAACCGGAGCTCTATGCATTGGAGTCTTC
GGGGGCACCTCCAGCGGGTTCTAGCTGGTCCTCAAGTACCGGCGAGTTGCCCACCGCACA
CGTGCACCCTCTGGAGCCCACTCCCCCTTGTTCTTTAGCCGGTGGCCATCTCTGCCGACC
TTGGTTCGCCGTCGGAATGCCGCCACCTCGCCGAGCTCTAGAAAACATGGTCGTCGTCGC
GAGAGCCATTCCCCGAGCTATTTGAAGGCACCCTCAAGCCTCTCCCGACGACCAGCAACC
TCCTCGCCCTTCCCCTCGAGCTCCGGAAGCTCTCTCCCCCTCCATGGCCGGAGGTGACAA
CCGGACCTCCGTGGCAAATTTGGCTCGTAGCCAACCCCCTCACTCTCCAGTCCACGCCTG
CAGCAACCCTAGGAGCCCCGGAAGCCACCGCTCTGGTCAGAGAGGCCTCGTCGAAGGGAC
TCCTCCAACACCCACGGTCTTCTCCCCTGCTGTCGTGGCCGCCTCCCCTCAAGGCATCCC
CGAGCGCCTATGCGACCACCCTCGAGTGCGTAGAGGAGCGAAGGAGCGCCCACGCTCGCC
GTCGGCCCTCCCGCGGTCGCTAGGCGCCGGCTGCACCGGCAGCCCGGCCTCCCGTGTTCC
ACAGCGGGAGGAAGAAGATGAGCCAGGGGATGGAAGAGAGAGAGATGGTGCGGCCCCCTG
CAAGTGAGATAGCGCACGGGCCCGTTTGAATAAGTGGAAGCGTATTATAGAAAGTACGAT
TTCGGTTTACCAAAAGCGTATTTTCGAAAATACACCTTCTGTTTTAGCCCAGCCGGCCGA
ACCCTTTATATTGTGAACGTTCATTGGTTAAGAGTAGAAATGAATAAGTTTTTATTTGAT
TTCTGCCTAACGAATGAACGTTCGTATCTTCGCGACCGTAGCTCGGATTGAGGTAAAACC
AACGCCCACTCCTTCCTCTCTTCGAGCCCGTCATGTATGTACCATTTCCATACTGTTTCC
ACACAGTGGAAATTGACCATTTTTTCCTTGCCCTCCGATTGAGACTTTCGAGAAGGAAAC
ATCTTTGGCAAATCTTTCCGGCGTTTTATTGTGCTTCTTCCCGGTGTATTCATCGACCCC
AGGCAAGCGAACCTCTTATCATGAGCTTCATACTTGCGTGATAACTTCGCTTGCACCCTG
TGTGTTTATCTGTAACACTTGTTAGTCTGCATTTGCATATACATGTGATGACATCGGTAT
TAGCTATTAGCATTACTCTTCGTCTAATGCCATGTCTTGTTTACATATTACCATACTAAT
AATAATATTGTTAATAACATTGACCTATTAATAATAATATTGTTAATAACATTGACCTAT
TAGTACTATGCTGCGATCTCATGCCATGACTATCATTATTTTGATCTTGCTCTTAACTGA
CTGTAGCACTTATAATTGTCAATGTAATGGTACGATGATGGATATGTTGAGTTTATTTAA
TAAATGCAACCTAGTTGGTTGATCTTGAGTCACCTGTCGGGGCTTACTCGTGCAACCACA
TTTGCCGGTATGGNNNNNNNNNNNNTTGGTCTGATCGCGTGCTCTTTCACTTGTACCTCC
AAAGAGGGAGGGTTAT