| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_1616491
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_23053 |
1 |
644 bp |
None |
Available |
Available |
LOC_Os11g26850.2, FRAME:+1, EVALUE:4e-73, 13111.m02570 protein erythronate-4-phosphate dehydrogenase, putative, expressed |
CDS Structure of MLOC_23053
Contig Sequence (2717 bp)
>contig_1616491 2717 assembly3_WGSMorex_rbca.fasta
GGTACTCGAAAAATGGAAAATGAATTTTCGGTCCAAAGAAAATTAAAACTTCCTTAGGCA
ACATTGTTTGCCATTCCAATACGCACCCTTCTGCACAATATGATATCATTTGAACAAACT
ATGCCATGAATGTGGCCATAATAATGATCATTTGGCTTAAAAGCCATGAATCTTCACACA
CGAGAGCTCACTTCTGAGAACACTTTTTTAAAATAATTGCCATCTTACAAGTTTATTATT
TTTCATGGTAGCTTGGTCACATATGATGACACAACACGAAGGTTTTGCATTTATTTGATT
TTTTTTTGAATTTCTTATGCCCGTTTCAAAATGCGGTCAAAACGCCGCGCATGACCGTTC
ATAGTTATGGATTAAATTTATCCAAAAAATTGTTGGATCTCTGATTAAATGACTACTTCT
ATATCTAAAAATGATTTTTGGAAAAAATTATGAGCAAACTATGAGGCACCTCTAGTTCAA
ATTTGTCTCGATTCCTACGGAATCAGCACAATTTTGTCTTTTCACGAGAGGTGGATCAAA
ACTTTTGTTATCCAACCATTTGGTCAATTGTTCATTAAATATGGCCTAGTATTTTAGAAA
ATTCATTTGGTCCAATTTTGCATCAAATATATTGTAGGTCCTTCACAAAAAAAACTTATT
TTGGGCACTCAAAAAATGGGAAATTGATTTTTCGTGTAATATATTACAATTTTCTGGTGT
TTCTCTCATTAAATATATAATTATGTACCTAAAAATGATTTAGTCGTGCTATTTTGCAAA
ATATTTTTGATAGCTGCTTCACAAAATTCCCCTAGTTTTAGTACTTACAAACTATTTTTA
ATCATAAATTTTCTGAACCAATCGTGGCTCTTCCCACGGACCACCCCACTATAACCGATT
TGAACCGTCCACACCCAAAAGATCGAACGTTTCTCATTCACGTGTCAGGTTTCAGCAATC
CAACCCAAACCCTAGCAAGCCCCTCTCCTTGCTCGATCCAGATCCGTATCACTCTCCTCT
GCCGCCGCAACCCAACCAAAGTTTCCCCTCCCTTGTCTCCCCTCGATCCAATCTTCTATC
ATTGACCCCAATCCCACCGCCAGCCACCTCCTCGCCACCGACCCCCACCCTCTACCATTG
CCGCCTCCTCTCCTCCCTCCCTCCAATCACTCTTCTTCCTCCTCCACCAGATTCGATCCA
CCAACCTTCTCCATGGCGCTCTCCGTGGAGAAGTGCTCGTCGGGTCGGGAATACAAGGTC
AAGGACCTCTCCCAGGCCTACTTTGGCCGCCTCGAACTCGAGCTGGCCGAGGTGGAGATG
CCCGGCCTCATGGCCTGTCGCACCGAGTTCGGCCCCTCGCAGCCCTTCAAGGGCGCCCGG
ATCTCCGACTCGCTCCACATGACCATCTAGACCGCCGTGCTCATCGAGATCGGCGTCGCG
CTCGTGCTGCTACAACATCTTCTCCACCGAAGACCACGCCGTCGCTTCCATCGCGCGTGA
CTCGGCCGCTGTCTTTGCATGGAAGGGCAAGACCCTCGAGGAGTACTGGTGGTGCACCGA
GCGCTACCTCAACTGGGGCGCCGACGGCGGCCCCGACCTCATCGTCGACGACGGCGGTGA
CTCCACGCTGCTCATCCACGAGGGCGTAAGGCCGAGGAGGAGTTCGAGAAGTCCGGCAAG
GTCCCTGATCCGGAGTCCATCGACAACCCTGAGTTCAAGACCGACGCCAGCAAGTACCGC
AAGATGAAGGAGAGGCTCGTCGGTGTCTCCCAGGAGACCACCACCGGCGTCAAGAGGCTC
TACCAGATGCAGGAGTACGACACCCTCCTCTTCCCTGCCATCAACGTCAACAACTCCGTC
AGCAAGAGCAAGGTATACCTCCTTCTCTGGTTCCCATTTTCCATTTCAGATTTGATGCTC
CCTGTCAGCGAGTTTATACTTGTTAGTAGTATTGTTGTAGTACATGTTTATGTTGTAGAT
CTGAAATTTTAATATTTAGATCTCGTTGTTGCCTATTTTAGATGATGCTTCATGGTGTGG
TAAAGCAACAGTGGAGTACTAGACTTGGATCTGTATCTTTTTTTCTTCAGGTTTGGTGCT
TGTTACGCTAGTTGTGTACTAACTAACTAATCATAGGTGTCGACCACCTGTATTCTGTAT
AACTATTTTAGATTTGCTTCTGGTTTCAAACTGAATATGCAGCTAAAATATGCTACTTTT
TGTGAAGATGTTGTGAAGTTTCTAGCATCTAGTAGCAGGAAGGAATGCACGTAGCTAGCT
ATGTAGAATCAGTACCAAATGAACTACCAAAATGCTATTTTTGATTTCTCTAAGTTGGTC
TGATGCATTGCAATTTAGTTGTCCTGTCTTACTTTTTTTTCTATGCATACAGTTGTTCTT
CATTTGTTACTAGTATCACATCATTTTTCCTGTTTGACNNNNNNNAGTATCGCAGTACTG
CTTGTGATGCTGTCATGAAAGCTCTTACCGGAGATGGAAGTCGAGGAAACTACAAAGAGG
GAACAGTTGTTATCTGGAATAACGAATCTACTTGTGCCTTCTCAAATGGCAAAGTTAAAG
GTGCTCAATGCGGAAAATACAAACATGTATCACTTATTGATTGATTTGTTGGTTGTCTGC
TAAATAAAATTGGATTTGCTGCTCTTTCAGGCTCAGATAGAGATGATTGCAGGAGAGTCT
ACTTGTAGGATGATCGT
