Contig Data
morexGenes
Links



Map Locations of contig_161648 (2659 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_161648

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_23052 5 2566 bp AK251360.1 Available Available None
MLOC_23051 1 861 bp MLOC_23051.1 Available Available None





CDS Structure of MLOC_23052






CDS Structure of MLOC_23051






Contig Sequence (2659 bp)

>contig_161648 2659 assembly3_WGSMorex_rbca.fasta
CACCGTTTGTTTCCTCATATTGGTAATGGCAAAGACATCCGGACGAACCAAATCTAGATT
AACTAGTCGCCAACCCGTGCAGCAGCACGGGCTAGAATGTGAACACATGTACATAGTATA
AATTTTCCAGGTAAACGTGATTTAGAACCTGTTCCATAATTTAGCAGAATTTATTTATAT
GGTCTCTAGGAATGATTATGGATTGTTTTGTTTTTAGGGAAGTACCATCAGACACACTAT
TTCTTGTCTATGATGGATTAATTATTTAATTATGACGACACTTCAGCATTTCTTTTGTTC
CTTCACTAACCATAGCTGTACTTGAGATTGTACATTTTAACCTGGTTATTAAAGTACTCA
ACCTGTCATATATCCTGATTTGGAAGCACCAATCATCGAGACGGGAAAGTAGGATTGATA
TTAAACTTAACTATTGATTGAGACAAACATGATTGATGGAAATTGAAAATAATGGATCAT
GTTTGTCTGAAACATTTAAATTTTGTTTCACTCAACCGATCAATTATAATGAATGTGAAT
AAGAGTGTCAAGCTATTCACAGCTTTGTAACCTACAAAGCTTAACTGGTTGATATCAAGA
AAAAAAAGATTCCGAGATTATTTGTATGTTGTAGCTTTTAATTCTGAAAAAGAGCACCAG
TCCTTGAGCTATGCATAAGGGATGTGCAACATCGTCATTCTATTCCTGAAGTAGGCTCTG
TAGAGGCATATTAGTCCAATCAAGTAATCTCCATGTTTTATTTTAGTAAATGCTGCATGC
ATTGACCATTGAACAAACACTATTAGTCTAGAAAGGGAAAACCTAAATAAATGTTTGAAC
AAATCATTAGTTGTATACTCGTACTTATATATGAGCAAAAGATGGATACATGTAATAATT
ACAGTCGTATCTTAATGTGAGAATATTTAAAATCTTGAATTCCATTAGCACATCCGAAAT
AAAGCAGACTTGTGTCTCACACAACAGAAGAAAGTCCTCTTCCCTGTAATTGACGTACAT
GTATAGAGTGTAGACTTCATCCTTCCTTCCACTACTGCTTCTCCAAGAGGATTGGCCAGA
GGAAATCTCAGCAGCTCCTAAAGTAGTTGAGAAAATATTTTATACAAATAAAAATCAATG
ATCTGATATCTTTCTACAACTGGAACATGGAAATTTAATACCCATGTAATTAAATCTTAC
CACTCCCTGTCAGCAACGGACAATTAAATACCCAGAGAAGGTAAACCTATTACGGAGAAG
CACAAACATGAGATAGGAGTGGTCTCTCAATCAACTTCAGACCCCGCACTAAGATATCAT
TAAAAGCTGCAGGAAAGGAACCCACGATGAGAAATTCAGCATTATAGAAGGGCATAACCT
TATGTAACAAATACAAACTATACAAATACAAATACAAAGTATACATAGAAGGGCATAACC
TTATGTAACAAATACAAAGTATACAAATACATAACCTTATGTAACAAATTCAGCATTATA
GAAGGGCATAACCTTATGTAACAAATACAAATACAAATTATACATACTCCAGAGGTATTA
AAGTATAGTACAAATTGGGACGTAAGAAACGAAGCATGGAGTCTAAAATTCAGCAATTTG
ATCGAGCAACCGGACTTAGACGTAGCAGTAAGAGAACACGTATTCGTGGCCATAGCCATC
AACATCAAGTGAAGAAATCATGCATCTTGCTTGTGTAGAGTGTGCCATAATATACTGAAT
GTTAACAGAACGATTACCAAAATCACCCTCCTATGGAGATTAGCCTGGATATAAACTCCT
GCAATATCTTATGGAGATTATCCATGATGATAGGCAGCAGACCACAGAAGCTAGATGATC
GCATGAGCTTCGTATTAGGGATGGCAACAACTTGGAGACCATAGAAGCTAGATGCTAGCA
GGAGAGAAAGGAACCTGTGTAGAGGGAGGGAGAAGGAGCCGAGAGTAAGGGGTGGCGGAT
CCAATAAAGACATCTCGAGCGGCGGCGGCGGCCGTTGGCTGAGGAACGTGTTAGGTAGGA
TGCTCACAGGACGCAAGGTAGTTATACTCCAGATCTAATCAGCGATTGATGGAGTTTCTT
TTAGGTATGGTGATTTATTGAGAACAGATGACATGAAGACATGAGCCTCGATGGGCCTTT
TTTTTAAAGTAAGATAAGATGTTTGGTGATATAATAAGACAAAACACTTGCATGCAAATT
GTTTTTAAATCTTGGATGTGTCCGTGCAAATAACTCTATGAAAATAGTACAAAAAACCTC
ACGGCACAGGATTTTTAACGAACTAATCTACACCGTTATAATTTGGACCTACCAGATTAA
CCGCTCATATTTACTAATTTACCTGGGAATTTCTTGAAAGCCTGTAATTAGTATAAGTAT
AGATTAATATCTAACGAGCATGGTTGCTCAAAAAGGCGACAAAACAATTGAGATCAGTTA
CTACACCACGTCAATGCTCGTACTTAACTCATCTTTTGTCGGGCGTGCATTTAAAGCTTA
TCCATCCATCCCCTGAACTGTGTTTTTGCCAATCTGCAGAGCTAGGTTCAGTTGAACTCA
CCTGCACATTCACCAACTGAGTAGTTGCACAAGCAAGGATACCCAATTTTATGTAGCATA
CAAAATGAATGGATGCGGG