morexGenes - Barley RNA-seq Database

Contig contig_161620

Source Contig contig_161620

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_161620 (1854 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_161620

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_23038	1	294 bp	MLOC_23038.1	Available	Available	None

CDS Structure of MLOC_23038

Contig Sequence (1854 bp)

>contig_161620 1854 assembly3_WGSMorex_rbca.fasta
CCTTGGAGGAGATGCCGATGTCGGGGTGGACCTGCTTGAGCACCTTGAAGATGTAGATCT
TGTACGTCTCCACGCTCTTCTTGGCCTTCTTCTTCTTCTTGTCGGCGCCGCCGTCCTTGC
CGGGCACGCGCTTCTCGGCCTTGGGCTTCTTCTCCGCCTCCACAGGCTTCTTCTCCGCCG
CGGGCTTCTTCTCGGCCTTGGGCGCCATGGCTGTTTCGGCGGGGAGCAGGAGGCGAGAGA
TGGGTTTGGGGGGAGGACTGTGGGCTTGTTGTGGTTGGGGTTTGAGGCGTGTGTTTCGGT
GGACGGGGCGCTGGGAATATATAGGGATGCGCGGAGGGGCGTGACTGGTGGAGACGGTTA
GGGTCAGGATCGGTGACGTGGCTGAGTCCGGGGTCGTTGGATTTGATGGACGGACGGATT
TGGACGCGGTGACGGGGTGGATCCGCGCGGGGAGGCGTGACCTCGCTGTTGGGCGGTGGG
TTTAGGCGGCCAGTAGAAATTTGGGAAGCGAAGCGCGAGCGGGAAGGTCTGTTTTGGGCG
CTCCGTGATGGATTGGAGTGAGTGCGACCATGTCATAATTTGGATTTGCTCGGGATTATT
TTAGGGTATATATATATGTTTGATGCGTAAGAGCAATGATAAGATAGAGTCAGTAGGATG
TGAGGATTAAAATAATATATTTTTTGTTGAGTTGGATGAGCGAGAAGAGGAGATGGAATG
AAAGCGGACTCTTCGTGAAGAGCTAGCTATATCACATGCTCCTACGTGTTTTGTGAGAAT
GAAATGGGCCATATATGATAAAAATAGTATCTTTTTATAGCTAACTATTTTACAAGCTAG
ATATAAGATAGCTTATGACCAGCAGTTGGCTATACTATTAACCATGCTCTAAGCATATAA
AGCGGGACCCCTTAAATGTTCGATCATGTCATCGGTCACAAAAAATTGACCTAGACACGT
CTCTCAAACCGGCATCAAACGTCTGGGCTGACCGACATCCCATTTCTAGCCCAAATACGA
GGGGATATGGGGGACCTCGGGCGTGTCCGGGCACGCCGTCACGTCGACCTGACAGCTTGG
CCCCACGCGGAGTCACCGGAAATCCCGACGGTCCGACGGGAGCCTCGACCGTCCGCACGG
TGTGAATATCGTGTGGCGCCACTCCGGCTCCCCACCAGAAGTCACGGTCGGCTATTTAAT
CCGGCCGACACACCTAACCCTAGCTCATCCGCCTCCTGCTTCTCTCCGCCTCCTGCTTCT
CTCCGCCGCCGCCCGAGCCCGTCCGCCTCCTCTCGCANNTCCCTCTCCGTCAGGATGGTC
CGACGGCTCATCACCATATACGTGCACCTCACTCCGGAGCGGCACCTTCAAATCGAGGCG
GAGATTCAGGCTCACCGCGCCACCCGCATCGCCGCACCTCCCTCCGGACTCGCTGAAGAC
GAAGAAGGAGGAGGACGAGCAGCAACAACAACATGAGGAAGAGGAGGAGGAGGCTTCCTG
TTTGAGCATGGCGGAGACGGACGCGAAGTTCGCCGTCGCCTAGTCGGAGGAGATGGCGGA
GCACCACGCCATCCTCGATTCCACCCGGGATGGGGACGAGGTATAGGCCAATCGTCGGCT
CATCCGGGAGAGGCACGCGGAGGCCGACGCCCTCTTCGATGAGATGGATGCGGAGATTGA
GGCGGAAGAGGCTGTAGCGGAGCAGCCGGATGCGTCGGAGGGGGCGGAGCTGCGGCAAGC
GGCCATTTACATTGGAATGAATCTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGGAAGAGGTTTAGTCAGTGGGTGTGCAACATTCAGATCCGCATGCACTTT