morexGenes - Barley RNA-seq Database

Contig contig_161581

Source Contig contig_161581

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_161581 (2270 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_161581

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_23018	2	1532 bp	AK364622	Available	Available	None

CDS Structure of MLOC_23018

Contig Sequence (2270 bp)

>contig_161581 2270 assembly3_WGSMorex_rbca.fasta
TATTTTCGGACGGAGGGAGTAGATATGAAAAAATAATAATCAGAAAACCAATGAAACCAG
GAAAATGGTTCAAGAAGCTTCGCAAAACCAGAACAAGAATGCTTCTGCCTAGTGCTAAAA
CGGGTCAGCCCACTTGATGGATGGTCTATATAAGGATTGAAATCCTTAACGGTTCTAAGA
GTTATGAAGCCCTCGTAACTGCAAGCAGCTTAGAAAATTCAGGAGATCTAAAATCTAATG
GGAGATATCAGTTATTAAGTTAAAAAAATAGCATTAGCATTAGTTTTAGAACACGGGCAC
CTAGCATTGCACACTGCCTATTACAAGTGTGCAATTTCAGAATGATTTTCCAAAATGGAG
AAGTAGGAGTGAGTTGTATGTATCTTTCCCGTCCTGCATGTCAGGATTGATAGAAAAGAA
TGGCCACAACTTTGGTTTACCTATAGAATAGTGACTATTTTGGGGGGATTTAAAGGTGAC
TGCTGGTAAGAAATATCAAGAACTTATTAATAAAGCACTTTATTATATTTATAGAATGCA
TTATACATCAATAATTTTCCAAGCTTATCTAGTGCATAACATAAACTAAAATCCAATCAA
ATAATACAAAACCTTGTGTTATACTTAACGACATACACATTTTTCTATATCTCTATGCTC
TTGAGGATCATGGGAAGCCCAAACTTGGGCCGCAGCGTGATCACATCCATCGGGGCATGG
ACATACTTAGGTGATAGGGAAAACGAAAACCTCTGAAGAATCACGGCGATAACGGCCTTG
GCCTCGATCATTGCAAAGCTCTGCCCAATGCACGACCTCGGCCCGCTGGAGAATGACAAC
AAGGCATTGGGATGCTTTCCGGCCCTCGCCACTCCATTCTCGAACCTCATAGGCTTGAAT
TCGTTGGCATCTTCTCCCCATACCTCCTTGTCACGGTGGATCGTCGCGATGGGGATCGTT
AGGACGGTGCCTTCGGGCACTTTGATGCCACCGACCTCGAGATCTGAACCCGCCTTCCTC
TGAATGAGTGATACAGGGGCGTATAGCCTGAGAGTTTCCAGTAGGAACATGTTGACCAAG
TGCAGCTTGTTGAGCATGTCGCCGGTGGGAACCTCACTGCCACACTCTCTTAGCACCTCC
TCCCTGAGCTTCTCCTGCCACTCAGGGTGCGTGCTCAGCAAGAACATGGTCCATGTGAGG
AGGTGCGAGCTGGTGTCATGCCCGGCAAAGAAGAATGTCTTGCACTCATCTATGATCTCG
TCCATACTCAAAATCGGAGTATGGCCACCCTCTGCCGCGCACGCCTCCAGCATGAGCCCG
AGCAGGTCGTTGCCGTAGCCCATGGTGTCTTTGGTGGCAAGACGGCTTTCGATGATGTTC
ATCAGCATGGTCCTCACCTCCTTGTCAAGCTTCCATATCTTGAGGTTCTTTTCAGTTGGA
AGGTACCTGAATAATTCAACAAATACACAGAGATTAATTTCAGCTGTGCGAAAACATATG
TTGTATGCTGATTTAAATTAAACCGACAACGGCACAAGAAGAAGAGGAGCTTGCATTTAC
CTGAATGCTGGGATTTGGACACTGAATACGGTGGAGAAGGCGAGGAACTGAAGTTCCCTC
TGCGCCAGGAAGACCTTTTTCCCCTGTTCGTAGCTGCTTCCGAATGCCGTGTGAGAGATG
ACATCCGCGGTTATCTCCTCAAACTGGCTGCTGAGGTCAATCTCCACGCTGCCGCCCTTG
TCCATCTTCGCCTCCCACTCCGACATCATTGACCCGGCACATTCGGACATGGTCACCGTC
ATCATCTGTCGTGCAAACAACAGTTAGCGCAAGTCATACGCATCGTGCCTAGTAATACAC
AAACGTCAACGCGTGCTGCTCTGGAGCTTGGCACACCGCGCACGTACCTTGAGCTTGTCC
ATGTTGAAGGCGGGGTGGACGACCTTCCGGTGGCGCTTCCAGTCGTCGCCGTCGGTGAGC
ACCAGCCCCTTGCCGAGCAGGCGGGCGATGTGGGGGTTCCCGATGTTCTTGGGGTACATC
CCGTTGCGGTCGGCGAGCACCTGCTTCACCACGTTCACGTCCGCCACGCACAGGCTCGGC
CTGGCACCGAACCAGTACAGGAACGTGCGCCCTGCAAGCACGACACAGAACGTAAGAGCA
GGAAGTAGACGGCCATGTCGCCGTAGAAGACAGCCATGGACTGGAACTTGGAAGGAATTG
CAGTCTGTCTGAGGTAGTGAGGTTTCGTACCGTGGATGGGGATCCATTTG