Contig Data
morexGenes
Links



Map Locations of contig_1615157 (2789 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_1615157

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22992 1 432 bp MLOC_22992.1 Available Available LOC_Os08g20480.1, FRAME:-3, EVALUE:3e-18, 13108.m02133 protein OsFBO20 - F-box and other domain containing protein





CDS Structure of MLOC_22992






Contig Sequence (2789 bp)

>contig_1615157 2789 assembly3_WGSMorex_rbca.fasta
GGCCGAGGAGGGGAGGGGTGCCGTGGGAGGTGCGGTAGCGGCGGAGGAAGCCGGGGTCGC
AGAGGATGCGGAGCCACGTCTTGCAGACGAGGGCGGCGCGGAAGAGGTGCTCGGGCTCAT
CCGGCGGGAGGCGGAGGAGGATCTCGTCGATGACGTCGTCGATCAGCGGTGGGGGCGGGA
GTGACGGCGCCATGGTGGACGACTGGACGGCGGAGCGGAGCGGAAGCGAGGGTTTTGGGT
GGGGATTGGGGGAGAGTCTTCGAAATGAGGATTGGGGAAAAGTCGGAGAGGCAGGGGCAG
GCGCACACTCTTCTTCCTGCGCGGCTGGGTTCGACCAGAACCGGCTTCACGGCATGAGTT
TTCTTTTTAAACACAAGTCACCGTACAAACGCACGTACGTCCTATATGTCTATATGTCTT
CAGAAGACTGAGTCGACATATCATTTTAAAATTTACAAAGTTATTATAGGCACCTTATCA
TCAACGAAAATATCTTCTTCCATTAAATATGCATCGCCGTAAATCCTAAAATAAATCCAG
CAAATATAATGCAAGCATGCAATCACAGGCTCGTTCGCTTGAGCGTATGAATTGTCCCAT
TATGATTCGTATCTACATCCCCGTCTGTAGACACGTCCGTATTAAATAATCTCTTTCACA
ATCATATATACTTATTGGACATGCTATAATACTCAAATAATGTCATGACACCAAGCGGTG
CATTACTGAGAATTAATTTGCATGAACTAAAACCTGATAGTCTTGAAGTTCTTGCATAGC
CAGGGCTACTAGACATGGTTTCATCCCAAGTACCCCCTAGTAAAAACACTTTTTTCTAGC
CCCAAGTTTTATGTTGCAAACTTAAACACAGATGAAAACCCACCTACACTGTCTCATATG
AGACCAAACTCCTCCATCACTCTCCTGCACGCATGCCTTGCATGCCAGACATCTTTGGCC
GACCATAATTATGATGTGGAGATAAGTGGGCGTGGTGACCACTCCGCTGACATTCAGAAA
CGTTGCTCTGTCGCGTTCACTTGTTCTGTAGCTCGTGGCAGGATGCCGCAGGTTGCCCAT
GCGCGCCACAAAGCCTCCCTCAACCTCCCACACTCCTCCCCGATGCCAAGAAGCTACCAA
GACGGCTATAGCACGCGTGCTCCCCGCGCTAGAGCGCATCCGGCGACCACCCGAGGCTCT
TCGTGCCGCCCCTATTTCTACCTTCCTTCAAGCGCACCCTCGCGCCCTAGGCCACCCCTC
TCACTCCCAGGGACACCCTGACAAAGCCCCTTGAGCCCCAAAGCTCAGCATCCTCCTCAT
GGCCGCCATGGCTCCGCCTCGGGACACACTTGAATTTTTTTAGGTGGACACGAAGTGTGC
TGATGGACGCCTCCGCCCAAGGAAAGCGTACTTCCCTAGGTATGCCTTCCCTGTTGCCTC
TGTCTTGCCCGACCAAGCTACTGGGCTGGTCCACTGCCTATCCAGCCCAGAGAGCGCAGT
TTAATCATTTTTGGTATAACTCCTTTCAATTTTTCAAAGACTATATAGATCATAGAAAAT
TCATCTCTACTCTAAATTTGATGATCAAAATTCCTACTGGATTCTAAAACCACTATCCAA
AGATGTGCTTTGCACATTTTTACAAAAATATTTTCTGTGGTATTCAAATTCAAACTTGAA
TTTGAATCATTCAAAAGTCCTCCTTTGAAAATCCCTAGAGGGTCCAAATCAACTCCAAAT
GGAGTGATTCAAATTTCTAGAGAATCCAAATATCATGCACTATTTTTCCAGCCTTAGTCA
ACATTTTTCTGTGCATTATTTCTGTTGCACCAAATAAATAGCCACTTTTTACCATCTATT
ACATATTAGAAAATCCATAGTAAATTCATACCAACTCCAAATCCCATGAGACTACTTCCA
AAAGTCTACTAAAATCATGCCCTATCAGATGGATGCATCCACTCATTTTTATGAAAAAAA
TTATGTACACTTCTTGTGGGGCAGTATACCTCCATTTCCGCCATTCAAAAATCTCTGGTG
ATCCAAATCTCTTAGAACATGCTTTAAAACTTTTTTGTTATGACCAAAGATGTCCAAGAA
AATAAAACTCCTATTTTTAGAGCGCTTTTGTTTCCTTCTTGATGTGTGGCCTATCGTGAT
TATTCTCGACGATAGTTGACAAAGTAGATGGAGTGCTCGGAGTGGACTAGAAGCTCGTGA
AGACCCTAGAGCCTTTGTTGAGCAAGGCAAGCAGCTCTTTGACCATGTCTAAGAAACTAC
TTTTATGCATGTCAAATAGCACTTCGTTTCGATGCTTTGAATCATGTTGAATCAGTGACC
ACCTTGGTGGGTTGTTTCTGATAACTCCTCTTTGATACTTGCAATTGGGCATATGACCCT
ACCTTCCTATGAGGGTTNNNNNGGTGGGAAGTAGTTAGGTTGCTAGTGGTTGCTATGCAA
ATGGGATGGGATCATGCATGGTGACGGTGAGAGAAGATGATTTCCAATGTTTTACGAAAA
CCACGTCGGGTGCCACTAATGCGCGAGGGAGATGTGTTGAGCTAGGTAANNNNTTGATAA
AGAAGTGGTGTACCGAGGCCAGTTGTGTGAGTGGTTTCTAAAAATCCGGATTAGATTTAA
GATTTGATGACCTTCCCGACCTTACATGTACAACCACAATACCCCTTATGGGACGTGGCT
TTGCTGATTACTATGGTCGGTGCTAGTAGAGAGCCCACATTACTAGTGGTGGGAGTGACA
TGGTCACTCTCGCGACGGGGTCGTGCCAG