Contig Data
morexGenes
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Map Locations of contig_161385 (1472 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_161385

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22909 1 529 bp MLOC_22909.1 Available Available LOC_Os05g39390.1, FRAME:+3, EVALUE:6e-20, 13105.m04151 protein outer membrane protein, OMP85 family protein, expressed





CDS Structure of MLOC_22909






Contig Sequence (1472 bp)

>contig_161385 1472 assembly3_WGSMorex_rbca.fasta
ATTTAAACATAACATGTCATGTTAGTTATATAATATGAAAAACTTGAAGAAAAATGTGTA
GAGTTTGAATATGTTGTTATTTTACATGTTAAATATATTTTTAAAAATACTATATGGGAT
ACAATACTAATCAATATTTGTCTTTATTTCGTATCGACTATTTGTATTGTATCGACTATA
TGTTTTATAATCGACCTTACGTACGTGTCTTTTTTTTTACAGTATCCACACACATTTTTA
CCAATGAACTACACTTTTTTCATTGTTTATTTTTCTCCCGTTGCAACGCACGGGCATTTG
TGCTAGTCATAATAACCCATTGAGACCTGATTTGAGAAACCATGGAGCGATAGAAAAATG
TTGGTTGAATAGAACATATAAACCAATGTTCAACAAATGGGCCATAGCATCAAACGACCT
CCTAATAGTTGTCCTAGTAAATATGCTAGATGTTTTTTAGCTGAAATAAGCTAGGCGTCA
GGACAATGTAGACTATAAGAGGTTTGTCACAAATTTTGCAAGGTATTATGACGCAATGGA
CAATACAAGATTGCTGGTAAACAATGAATGCTCAAGTTTTTTTTTCCTGAAAGTGTTATA
TATTTAATGATTGTAGGTGGAGCACACAGAGAAGCTAAAAACAAACTAAAATGATGAAGT
AAATTACACACTAAATCCATAATAAAAAATAAAATGCAAAGCATACGTCTATTATACTCC
CTCTTTTCTTAAATATTTGTCTTTTTAGAGGGTTCACTACAGACTATACACGGATGTATA
TAAACATAATTTAAAACGTAACTTTACTTATTTTGTTTCGTATGTAGTTTATAGTTAAAT
CTTTAATTAAAAATACAAATATTTAGAAACGGAGGAAGTACTACCAAGAAAGAAGAACGG
GGGAAATAAGGAAAAATAAGAAATAAAAGGAAAGCACACGCGGTGAAGACTTGCAGTGTA
AGAAGAAGGGAAAACACGTACTCTCCAAGAGAAGGAGAGAATTCAACATCATATATTTGG
GGTTCCGGCCCAGACAGCCCACCGGACCGGCGCTAACAATCCAGCTTGGTAAGCACGAAA
GGCCGCATCTGAAAAAACAAGTGAAAGCTCGGAAGGCTCTCCTCTTCCCCCAAACCCCAA
CCATGGCCGACGCCGCCGACCCCGCCGCCGGCCAGAACCCTAAGGTCGCCGGGAACCACG
TGCCCGAGCCCTGGGCTGGCGCCGATGGAGAAGTCGCCGAGGAGGAGTTCGAGTACGAGG
ACGAGGAGGAGGAAGAGCTGGACGAGCCGGCGGCCGCAGCCCTCGAGCGGGAGAAGGTGC
AGTCCGTGTTCCGGAGGCTCAGCTCGGACCCCGTGGGGATCCGCGTCCACGACGTCATCA
TCAGGGGCAACGCCAAGACGCGGGAGGAGCTCATCGAGGCGGAGGTCGCCGACCTCATCC
GCTCCGCCACCACCGTGCAGGACCTGCTGAGC