Contig Data
morexGenes
Links



Map Locations of contig_161380 (3189 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_161380

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22907 1 577 bp MLOC_22907.1 Available Available LOC_Os02g15710.1, FRAME:+3, EVALUE:6e-38, 13102.m01752 protein plastocyanin-like domain containing protein, putative





CDS Structure of MLOC_22907






Contig Sequence (3189 bp)

>contig_161380 3189 assembly3_WGSMorex_rbca.fasta
CACTAGGTGACTACATACGAAGCAAAGTAAATGAATCTACACTCTAAAGTATGNNTATAT
ACATCTGTATGTAGTCCTCTAGTAGAATCCTTAGAAAGACTTATATTTAGGTACGGAGGG
AGTAGTATTTATACTGCATCTCACTCACGTATTCAAACTACCATTGGCCCAGTAATCTCC
CTCGTTTGTGTTTTCCATTGGACTGTACAAGGAAGAATATTAGATCAGTTTTGAAAAATG
GATTAGGGATTGAAGATGATTTTCGGTTTTTACGAGATCAAACGTGACTCCTCGTCGCGA
CGTGTACGTGCAGTTTGAATTCGACGCGGCGGCGGCTGCTCGACGGACCACGCAGCGGCC
ACAGATTCGTTGAATTCGACGCAGCGCGGGGTAGCGGCAGCAGCAGCTTGTTACATGAAC
TTGGTTCTACACGGCCATGAGCACCTCACCTTGGTACACGGCGCAACAAGTTTTGGCGCA
AGAAGGTCAGACGAAAGACGTGATTTTGGCGCTGGTTTATTAGCAGCTCTCGTTAATTCA
GGGTCGATTGTTGATAAGTAACAGAAGACCATTGGATGGGATGAAAAGTGAATGAATGAT
CGATTTTGACATGTACTGCAATTCTGCCGTGAAGGCGCTGCACACGAGCCGCGTCCAGGT
GTGCGTACGCTGCCGCCGCACACGGTATCTCATCCAGACATGGGAACAAATGATGCGTAT
CCCTGCGTTATTTCGTCCCTTGAAATCAAACGTTAATGCCAGCCATTCAATGGTGCATAA
AGCATAACAGATCCCACTAATCAATGGGTGCCCTTGTTTATACGGGCTGCCCGACACTTG
CCATACGTTGCGGATACCATGCCTCCCGTCGAGCCGCATATATTATATTATTATAAATAA
AGCGAGGGCTCTTGACGTGCGGTATTGGAGGCGTCAATGGCACGACCAAGCATTGGCTCC
GCCGCCCCGGTGCTGGTTCTGGCCTGGTGCTGCGCGGCAGCCACCGCGCGAGGGACGGAG
TGGGTCGTCGGCGGCGACAAGGGGTGGACCTTCGGCGTCGCCGGCTGGGAGAACCACAAG
CCGATCCAGCCCGGCGACAAGCTCGGTGAGTAACCCCACGGCCGATCACGCACCGCCATG
TTATTAACTTTTATATATCCTGTTGATGATGATGATGTTCGTGCGACTTGATCATCAGTG
TTCAAGTACCAACCTGGGGCGCACAACGTGGTGGAGGTGGACGTGGCCGGGTACATGGAG
TGCAAGGCCCCCGACGGCGCCAGGACTCACACCACCGGCAACGACACCTTGGAGATGCCC
GGCGGCAAGGCCTACTTCATCTGCACCTTCCCCGGCCACTGCGAGAAGGGCATGAGGATC
GGCATCCCGCCTAGATAAATAGGTCCGTTGATAAATAGCCCGACGTACTCTCTCGCGGGC
TTGTTGAACGATAAATAAACTCATGGGTGATGGAATGTTTGTCTGCAACTGCAAGCCCAG
TTTTTCCTAGCCGTAGAGATGAACGAGTAAAAAGGGAGGACGGGAATAAATAGATTTCAC
ACCATCACGTGCCGGCAGATTTTGGTCTCCCGCCATATTCATGTTGATCCCCGCACCACC
GCGCCCCCCACTTCTCTACGCTCGACTGAACCTGGCTGATTCTAACGTTCATATCGAATT
AGGATCTGGAACGGGGTTTTCTTGCATCCAGGGAGCCTACATTTTTGTGTGCGAGGGTTG
CAGGCAACCAAACAAGTCGTAAACTCAGTTCCACGTGCACTGATTCCATCCCTCACGTAT
ATAAATTGTCACATAAAACTTCGGTTTGTCATGGGCGAATTCCAAACGTTCGGGGCTTAT
CGGCGTCCAATAACTAATACGCCCATCCATAGATCTTTTATCTCTCAAATCAAAGAATCC
ACAAGATGATTCGTCTGTCGTACCACGTCAAGCAAGCATTACGGTGAAATAAGGAGCCGC
AATGAGGGCAATCCCAAGTTCATAAACAGCTCCCCGCCAGCTCATCGACGGGAACCTAAG
GGTGTCCATAACTTCGGTGTTGCGCAACATAGCATCCAGATTACTTTGATCGGTGGATGG
AGCTGCACAACATAGCATCCAGATTACTTTGATGGGATTCAAAGTGTCAATGGATGGAGC
TGCACAACATAGCATCCGAATTACTTTGATGGGATTCAAAGTATCGATGCAGTAGCAAGT
TTGAGTTAACCGTTGTGTGCAATTTTCTGTTCTTGGTGCAGTTGGAGAAATGAAAAGAAC
AATTATATCCAGTTTCAACAATATTATATCGTGCATCAACAAGTAGAAACATCTCCTTGC
AGAGAAGGAACACGTAGAAACAGTGGCGGCGTCAGGAAATGAAGGCTGGGTATTCACCTT
TTTTTTTCTCTAAATGTAATATATGAATCAAACAACACACAACTAGCAATATATCAGACA
ATGTATTAGACATGAATATGTTCATAAGCATTTTCTGAATTGCAGCTTTTAGTGTCAAAG
AGGTAGTATCTTTAACATTAAATTCAATAAGCAATAGAGATGTTTGAAAACAAATGTAAA
TAGATCCCTTCTGGATTTCTAATTTTTCAGCTGCTAGTTTTCTCTTTTGTCGCTTTTCAT
GCCCAGGCATAGGTCTTTTAGATGACATCTTAGCACAAAAATATAGCACACAAACAGTAA
GGATAAACTAAGGCAAAAAAAAAATGAAACAAGAGCACCTAGAGAATTATGGATGGGTTG
ATTGGTTACTTGGTGTCTATTGTGATGTTGCTTGTCGCCCCGATGAGATTGAGATGAAGA
CAAATCCACCAACCTAGAAACCTTCTTCAGACTCAAGTCCCATTTTTTCTCTTTTAGATC
GAACATTTTTCAGACCCCTTTTCTCCCTCAAGACTCAAGTCTCAAGCCATTGGACGAAAA
GGGGATCACAGGAGGGCGGGGAGAATTAGATCGCTGCAAATTTAGGAGGGGCATGTTGGA
GATCAACACAATAATCTTCCTTCGACTCCGAGCACCAGCGCTGGGGCCAGGGCGCAGTAT
GCCGGGGCGGGGCCACCTCGGACCCGTCGCCAGCGCTAGGGTGGCCTCCGAATCCTCCGA
CCATGGGGACGGGCCGACGGGAGCGGGGCATGGATCGGGGAGAGACGAGCGGATCGGGGG
GAGACTGGC