Map Locations of contig_161307 (3756 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_161307

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22863 4 1441 bp AK367269 Available Available None





CDS Structure of MLOC_22863






Contig Sequence (3756 bp)

>contig_161307 3756 assembly3_WGSMorex_rbca.fasta
TTGGGATCACCGATCCTCTGATTGCCGAAGCTTTGGCTATGCGTGAAGGTGTCATTTTCG
CAAGTCTTCGGGGTTTCTCCGAAGTTACTATAGAGACAGATTGCCTGGAGGTGGTTAACC
TCTGGCGTGATCGCCGTGATGGTCGCTCTGTGGTGGCCACTATCTTCTCCGAGATCGAAG
AGCTTTCTCTTATGTTTTCCTCCTTTGTAATTCAGCATGTAATAAGAGCAGCGAACGGTC
CAGCTCACCTGTGTGCCAAGCGTGCTTGCGCCAACGGGGCTACCGAGAGCTGGCTTTCTG
AAACTTCCAGTTTCCTGGTGACCAGCCTGTTGGCTGATGCAAACATTTTTTTATCAATAA
AGTTGTGAGAATTCGTCGCAAAAAAAAAAAGTTCTTCTGCAATGGAATCTTAACCATTGG
TTGCTCATCAGCGATGACTTTCTTCCATGCATCACACAACAAATACACCCACATCACATC
ACATCACAATCGCATACAAAAATGAAAAGGGTTTCTACTCGGCTTATGATTGATCGCTGC
CGTTGGCTGGAACAGAAAGAGAAAGAGGAGAAGACAAAGTTGCAGCGTCAGCGCGACCTG
CCCGTGCCCGCCCCACCTACCGCCGCCGGCCGCCCAATCGATTGGCAATGTCGCGGCCCG
CCGGCAATCCCCCGTACGCCGTCGAGCTCGGCGCTGCGAAGAAGGCCGTCTCCCTCGCCG
CCCGCCTATGCCAGGTGCCCTTCCTCGGATCCCAACCCCCTTCCTCCCTTCCTTCCTTCC
TGTGCCGAGTCCCCCCTGGGGACGCTGCTCGGCGGAAACCGCGTTCGCGCCGCCGCCGCC
GGCCGCTGGCAGGACCGTGCCTTGTCTTGCTTGGTTTTCCTGCACCGTTCCTCCGAAATT
ACCCGCAGAAGCAACGCTGGCTGATGGTCAACATGGCGAAGTGACCACCTTACAAGCGTA
ATCAACTCTAGATTTGAAGTATGTTAATGTAGGCACGCTTAGATGAGCATGTCGATTGCA
AACTTTCTTGCTTCGCTATTCAGATTGTTGATGCATCGCTGCTGCACTTGGAACTTACTG
CGTTTGACCTGTGACTCCTCCTTCCTCAGACGGTGCAGCAGGAAATCGTGCAGTCAGACA
TTCAATCTAAGGCGGATAAGACTCCTGTCACCGTAGCTGATTATGGTACATGCTCACTCT
GTAACTGTTTACTACCTCCAAGTGCCTGTATCTGCTGTTTGATGCTCAATTGGCCAGACC
TCATGCTTGAACCGTAACTCAAGTCGGTCGACAGATTTCCGTTGTTTTTCTTGATTTAAC
TTACATGGAGATGTTAAGATTTCTGAATGACATGGCTCAGGGATGTAAAGAACATTTAGG
GTCGTATGATCTTCATCAGTTTACATTCGCATTTGAAACTTGTTCGTTCACTCAACTTCC
CATTCGGGTGATGATTTTCTTTTCATACATGTAGGATCTCAGGTATTGGTGAGTCTTGTG
TTAAATATGGAAGTAACCTCTGGTTCCTTTTCTATGGTGGCCGAGGAGGTAAATCACTTG
TGTTTCTGTTAAATTATTTCTGTGTATAACACACAAGTATTCTCCAATTGAGTGTGTGTA
CGTACGTAGGACTCAGAAGACTTGAGAAAGGATGGCGCTGACGAAATTCTGGAGCGCATT
ACTGATCTCGTAAACAAAACTCTCGCTGAGGATGGTTCATACAACATTTTATTATCTAAG
GAAGCTATCCTCTCTGCACTTGATACCGGGAAGTCCGAGGGTGGTCCATCTGGCCGACAT
TGGGTTCTAGATCCAATTGATGGGACTAAAGGGTGAGCTATGATAACTCCAACCTGCAGG
TTTCACATTCTCCTAATGCGATAAAAAACTGTCTGTTTTTTCCGCCAATTGCACCATCTA
TTGTAGTAGTTTCTACAGCTGCCTTCTTGCTTACCAAAACCAGCATTGGTGCTTTAATTT
GTTGTGCGTTTTTCTAATCATTAATTATTCAAGGTAGCAGGCTCCACTGCCTTCTTTCAA
ACAACTGAAGTCCCGACCATTGACTCCAATTTCTGCATACGGGAATGAGTTCTTTTACCA
ACGATCTTATTTAAGTAGTAGAGATGCAAATGTTACTATGGAAATTTAGTGAAGCAGTTC
CATGTAAACTATACGCGGCTCTCTTTTCTGGAATAGCCTGTGAAGTGCGAACAACTGATC
GGTTAACTGGCAAGATTAAGTACTTCTCTTGCATGCACCATATTTTAACTAGACACTCTA
AACTGATTAATCGTGAACACTAATAGCATTGTTTGAAAAGAAAGACATTGCAGTCATTTG
ATGACACCTCATGTTGTTACTATCTTTGCCTATAATACATTTTGATCTTGGTTTTGTCTT
AATAACTTGTTTCAGATTCGTGAGAGGAGGCCAATATGCCATTGCACTGGCACTGCTTGA
TGAGGGCAAAGTTGTCTTAGGTGTGTTGGGATGTCCAAATCTTCCTTTGACATCAATAAG
TAACCTCAGTGATAGCTCATCAAGAGATAAAACCGGGGCCCTCTTTTCAGCTGCAATCGG
TTGTGGTGCTGAAGAGCAGTCTTTGGATGGCTCTCCACCACAAAAGGTCATTACCACTTT
CAATCTCTTTAATTTGATTTTAATCAGTTAAGGCTATTTGTACCTTTGTGACATCTTTTA
TTTTCTTGCGATTGACTTGCTTCTGGCTAACTTTCATTACAGATTAGTGTTTGTACCATC
GACAATCCAGTCAATGCCTCATTCTTTGAATCCTATGAAGGAGCACACACGATGCGTGAT
TTTACTGGATCTGTAGCGGAGGTTTGATCTTGATCACTCTTTGCTTAGGCTGTATCCATT
GGAGTAGAAACTAATTCTGTGTTTGAGTGCTAGTAGAAACTTGGTGTCCAAGCTCCTCCA
ATCAGAATAGATAGCCAAGCAAAATATGGTGCTGTGGCCCGTGGAGATGGTGCCATTTAC
TGGCGTTTCCCAGACGAGGGTTACAGGGAAACAATATGGGATCATGCAGCTGGCTCAATT
GTTGTCACGGGTAAGAACATTTCTCTCTGTTTTTTGAAACAAGGAACTCAACTGAAGAAT
ACACATTTCTTACTTTTATTTTTCTGATGTTTCCCAGAAGCTGGAGGTGTAGTTAAAGAT
GCCTCAGGAAACGATCTCGATTTCTCGAAAGGAAGATTTCTTGATCGTGACACAGGCATC
ATTGCTACAAATAAACAGTTGATGCCATCAGTCCTGAAGTCTGTCCAGGAGGCAATCAAG
GAGAAAAAACAGGCCTCTTCTCCATTGTAGAAGGTTTTTTTAACCTTCCCTGTTACTGAA
GTTGGATTGGTCCAAAATAATGATCGCTATGCTACTCCTTGTTCATTTATTCACACTGTT
TATGTGTAAGTGACCTTTTGTTGGAAAAAATACAACCCTTGTTATAGCACAATATTTGTA
CATATCCAATGAGTGGCTGATAGGCAGCCATGCCTGTAGAAATAGCTAGAAGCGTCGTAC
CGGTTAGGGCGACGGTTTCGTGTTTATATAGTCAGGCGCAACCCTGAGATATGCATACAA
GTAATTTGAATACAAGAGATAGAGATAGAGGATATTCGGTTTAAACTAGAGATAAGTCCT
AACCGAATATCTATCCTAACTTGATACACAAGTATTCTATCTACACATAATATCTCAATC
GGTTTAACATCCTCCCTTAATCACAACTTGGTCAAG