Contig Data
morexGenes
Links



Map Locations of contig_161234 (5097 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_161234

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22808 3 1343 bp MLOC_22808.1 Available Available LOC_Os06g22960.1, FRAME:+3, EVALUE:2e-154, 13106.m02470 protein aquaporin protein, putative, expressed





CDS Structure of MLOC_22808






Contig Sequence (5097 bp)

>contig_161234 5097 assembly3_WGSMorex_rbca.fasta
TTGTACAATTTAAAAGCTGGTTTATAGTTTATATAATCTAGCCTCCAAACATGCCCATCT
GGATTATTTTTATAAACCAGATTATATAATCTATGTTCATAATTCAGATTATCATAATTT
ATTATGGTTCCAAACAGGGCCTAAGTATCCCTAGTGACATGCACAAAGTTTATATTTGAT
CTATTTAGTCAAAAATAATATCAAATTTGATCTATGTTATACATGAGCCTAACACCAAAA
ATAGGCATACATTTATTATTATTTCAAACTGAAGAGCCGCTCAGCCCATCTATAAGAGCT
CACGGGCCATGTCTCTGATCCGTATTCTCAGCGACAACATTTCATCTCTCATCCTCCCAG
CTTGGTTTTCCGGCCATTCTAGCCACCATGCCAGGCTCCATCGCCTTCGGTCGCTTCGAT
GACTCCTTCAGCGTGGCCTCTCTGAAGGCCTACGTCGCCGAGTTCATCTCCACCCTCATC
TTCGTCTTCGCCGGCGTCGGCTCTGCCATTGCCTACAGTAAGTTCTGTTCAATTACCGCA
CATGCATGCTCTGCTCGTATGGCTAAACTTGACGATGACGATTACTGGGTGCTAACGAAA
AGGTAAAAATTGCAGCCAAGGTGAGCGGCGGCGCGCCCCTTGACCCATCCGGGCTGATTG
CCGTGGCGATCTGCCACGGGTTCGGGCTGTTCGTCGCGGTTGCCATCGGCGCCAACATCT
CCGGCGGCCACGTGAACCCTGCCGTCACCTTCGGCCTCGCGCTCGGCGGTCAGATCACCA
TCCTCACCGGCCTCTTCTACTGGGTTGCGCAGCTCCTCGGTGCCATCGTCGGCGCCTTCC
TCGTCCAGTTCTGCACCGGCGTGGTACGTATCCTCAGCCCATATATATTGGTGCGCTTTC
CGGCCGGAGGAGCACGAAAGAGGATGACACTGATGGGGACCGTTTTCTTCCATAGGCGAC
CCCTACACACGGGCTTTCCGGCGTGGGCGCTTTTGAGGGCGTGGTGATGGAGATCATCGT
CACCTTCGGGCTCGTCTACACCGTGTACGCCACCGCCGCCGACCCCAAGAAGGGATCCCT
CGGCACCATCGCCCCCATCGCCATCGGCTTCATCGTCGGGGCCAACATCCTCGTTGCCGG
CCCCTTCTCCGGCGGTTCCATGAACCCTGCACGCTCATTCGGCCCCGCCGTTGCCAGCGG
CGACTTCACCAATATCTGGATCTACTGGGCCGGCCCGCTCATCGGCGGTGGCCTCGCCGG
CATCGTCTACCGGTACCTGTACATGTGCGACAACCACACCCCCGTCGCCAGCAACGACTA
CTAAGCCATCCATGTGAAGGGTCGTTCGGTGTTTGGTTTCCATGATGCCTTCGGCAACAT
AAAAAAGTGCGTGCGTGGTGGTCAGAATGTCTCGATGATGTGAAGAACGTCATGTTGTTT
GGTTCAGATCGAAGCCCAGTAAAGTTGTAGCACTTGGATGATGCATGCTTCTCTATCTGT
AATATAATGTGATGTTGTGAAGTTGTTGGGGTTTGAGAATTCTTCAGTTGAGTTTCCTTA
TGCGATTCAATAAGAACATCACTGTTTAGTGCATTCAAGGCCAAGTTGTGATCCTTTTCT
GTTTGTGATATTTTTTTCTCGAATTTTCTCTGTTTGAGTTATGAGTTATCGCCGGTATAT
CGATCTAGAACTACTCCAGTACATTTTTTTTTTCATCACGATACTGCGTTCTAGTGATTT
TTCCTTTAGATATTATTAAAAAAATTCTTCAGACATGAATGAGAAACCACAGCAAGAAGT
TCATGCCTAGCTCTTCTCTATCATTAATCATCTGATAAGAACAACTAGCCCAGTGTAGTG
TCACATTCTCCCGCAACAAAATGAAGGACACCCAGTTACAGTAACACGAATTTGCATAGA
GGATAGGCGAATTCTTGGTTTTTTAGGGTGGATTCGGGTTTTCGGAAAGAGGGATATGAC
ACACACACGGAAAGTGAATGGTGTGTCCCTCATTTCCTCGGATTGCAGACCATGACACCT
CTAGAGTATGCAACAACTATATATCGCTAATAGCGAGAGTAACTCCAGTCTCGTGTGGAT
ATTTTCGTGTGGTTTATAGTACCGAGCGTACTGAGTTGGCACATTTCTACCTCTCATTCA
CGATCATCGCTCGTTGTTGCAATTTTTTTCTTTCGGGTTTCTTTGTTTCTTCCCCAGGTA
TTTTTCATTTCCCCACGTTTTCTTTGTTTTTTCATCAATTTTTTTGTTTCTTTCTTGGTT
TTCATAGTTTTTTTTTGTCTATTTTCTTTGGTTTCTTTGTTTCTTTCTTAGTTTTCACTG
AGTTTTTTATATTTTCTTTTCCTTTTCTTCGTTTTTGTTAGTTTCATTGTTTCCATTCCT
TTGTATTGGTTTTCTTCTTTTTCCTTTTCCTTTTTGTACTCCTTTTTTGTATCTTTCTCA
GTGTTCATTGTTTTGTCATTTTTGTTGTTCATTCTTCAAGGTTTTAACTGGGGGTTTTCA
ATACATGATTAACATATTTCGTATACATCAAAAACATTTTTTTGTGTATAGTTTGAACAT
TTTCTAAATACGTGATTAACACGTTACAAATATATGTCTTGATGCATATTTTCTTTTTCG
TACACATTATACAATTTTGGTTTACATATAAAACACTTTGGTATATGCCTTTAACATATT
TCATGTACATGACTCACATTTTTTCCAGACATTGCTTTTAATGTAAACTTTTTTTCATAC
ACGTGTACATTTTTGTTATACACACGGAACATTTTAATATACACGATTTAACATTTTTCA
AATGCATGATCAACATTTTTTTATGTCTACTTGTTTCCATACACCTTATACATTTTTTCC
ACACACTATGATATTTGTTTTATACATGTTTAACAATTTGAAAATACATGATCAAAATTT
TCTAAACCATATGTTTTTGTGTCTATTTTTCATACATGTCGTATAATTTTGTTGCCAGCA
GCGACTTCACGAATTTTTGGATCAACTGGGCCGGGCCGCTCTTTGGAGCCAGCCTTGTGG
GCATCCTTATCATGTGCGACGACCACACCCCCGTCGCCGACAACGACTACTAAGTGATTG
TAACACCCCTGATTATCAGCTATAGTGATGCATGCAACTAAGCTACAATAAACCATAAGG
TTAAGCTAATGCATTTTCTAATCAATGTTTGATCACAATTGGAATCTTATCCCATTTAAA
ATTCCTAATGAATTTCAAAATTCATTTAATAAGTGGTTTAAATATTTTGGCAAACCAAAA
AACTAAAAATATGTTTGGGTTATAAATATTCCACTGGCTTTTATAAAATTGGAACCAATA
TTTTATCAAGTATTTTGGTGCCTCAAAACCATTATAATAGAGGCCAAAACATTTAAATAA
ATTCCTTTTGAATTATGTAAATTTCCAAAAGTTTCATAAGGGCCCCAAACGTTTTGTGAC
AGTACCAAATATTGCATTTCAAATATTGGACCCTATCGCATATTTTACAAAAGTCATTTA
GTACTAAACTAAATCAAAACAGAAAATTAAATGAAAATAGAAAGAAACCCTAGCCACTTG
TGCCATGGTACTAGAGGAACCGACCGAGCCCACCACCACTCCCTTCTTCAACCTTTGTTC
ACAAAGGCCTTCGTGGAAGAAGGGCGCGTGTCCATGGCGTCGATGGCCACGCGGCGACCA
TCCGATGTCTCCCCGTGTATATAAGCACGTGCCCGACCCCAAGGGCAAACCCTAGCCCCA
ACTCCCCTCTCTCTTGCTCGTTCGTCAATCCGGATGAAGCCGAGCTCATGGTCGCCATGG
CCCCGTCGAAGCCTCGCCCACCATGCTCCCCGCGTCGTGAGAACGTCTCCAGGAGAGCCA
CCGCCGTCGACCTCGTTTTCCCCTGCGCCAAATCGAGCGGAGACGCCTTGTATGCCTCGT
CATCTCGATCTTGTCTAGCACGGCCGCTGTTGTTCGTCACCGGCTATCGCTGCTTTGGGC
CACCCACCGGCCTCCCCGGCCTCACCATCGAGCTCCTGGTGAGATTCTCCCCCGAATCCC
CCTTTTGCCTGTCGAATTCGTACGCTACCGTGACCGAGCTCAGCCGGATCTTCGCTCGCC
ACACGGCCGCACACGCACCCGCCTGCTGCCTTGGCCATGCGCGCCCGCAGCTGGCCGAGC
CACTGCTTGCGCCCGCCTGCATGTGGCTGCACGCCTGCGCATGCCCGCTGCCGCCCGGAC
GGGCTCGACGCTGACTGTCGTCCGCTCGCCCGCTTGCATTGCTTCTAGCCTTCTATCGCC
GCTCTCTACTCGCTGCTGCTCTCTACTACGATATGGTCCTGCCGCCCTTGGCCACGCGCC
CGCGTCCCAATGCCCAACCATGCATCTGCACTGGCGCTTGCCTTCCTGTACCTATGTCCG
CTTGTGCGTGGTTGTTCGCCCGCTGCCGCTCACACACGCCTGCGCTGCTGCTGCCTACGT
TGTTGCTGCCCCTTGCTTCTCCTGTTGGGTGCTCCTGCTACTGCACTGTTGGTAGGAAAA
TGGCCTACCGCCAGAGAGGATGGCGGTAGTGCATGTGATCCTTGCTGCTGTCACTGGCCA
TGGAGGTAAAATTCACTGTTTTGACCCTTTTATCGAAAGTTAAGCCGGATTTGACCCCGG
TTGAAAAAAAACGGATCTGACCCTTTTGCTACCGCCAGACATACGTGGCCAAACGGACCA
GCACAGCACCGCATGGCATGTCCCGTTGTAAACATGCCCGACACGACACGGCCCGCACCG
ACACGTTTACTAATCGGGCCGTGTCGTGCCAGCCCGTGGGCTGCGCCTCAAGGCCCAGGC
ACGGCCCAGTTATTAAGCGACCCGACATGTTGGCCCGATTAGCACGCTTGGCCGTATATT
TTTAGCCTCATGGGCTTATTTTTGGGCCTATTGGGCCATATATTATGTATATATATTTAT
AAAATCTAAATATATATATAAAAAATAAACGAGGCATGCAGTGCCAACCCGCGTGCCTAG
CCTCCAGGCCCAGGCACGGCCCGAGGCATGCCGCGTGCCTGGCACGGGCCCGTTTAA