| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_161208
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_22800 |
1 |
1225 bp |
None |
Available |
Available |
LOC_Os05g22370.2, FRAME:-3, EVALUE:6e-12, 13105.m02263 protein N-acetylglucosaminyl transferase component, putative, expressed |
CDS Structure of MLOC_22800
Contig Sequence (3529 bp)
>contig_161208 3529 assembly3_WGSMorex_rbca.fasta
ATTGAGGATAGGGTCGCATCTTGTGACACTAGTGATGCTACCCCACCTGTTGAGACTGCA
CCACCATAGTGACCGGGGCAAGCATATGCAGGTTGGTTGGAACTCGTGTGAAAAATGATA
TGCTTGTAACTAACATGTTGGTTTCCTGCCAAAGAAAAAAATGTGTTCTCTGAGATAGAA
CTGAGCAGCATCAGTTCCTCAAAGCTAAATGGTACTTCCCTCGTTCACAAATATAATTTG
TTCCCATTTGTTTCTAAATCGGATGTATAAATACACGTGTTAGCGTGTTTGTTCATTCAT
TTCAGTATGTATATAGTCCATATTGAAATATCCAGAACATCTTATATTTGTGAACGAAGG
GCGTATTATTTTAAATAATCAGTACTATAAAGCAGTCTGGAACACATCATCTTGCAACAA
ACAAGAATTGTTATTGTGTTAGGCAACAAAAGCAAAATATCCACTGCAAAACTATGGCAA
CTAAGCAAGATTCTCTATGCAACTAATAGTTAATCACAAGCAGAGAACTTTTTCAGTTCC
TTCCCCACTTGGTTGCACCATGGCAAAGCATCTAGTATTCTCTAATATCAATATGCATCC
AAGGCAACGGAGAAGATGGCATATGGAGTGTTGTAGGTATTTCGGCGTAAACATAAGCTA
GTGTCAGAGATGCCATAGCATGAATAAAACTAAATCAACGAGAGAAGTAGCTACATTTTG
CCCCCTAATGATTCCATGTGCTAGTTGTTTGCAAAAGGGGAGAGTGATCCTGTTAAAAAC
TTTTTGGTAATGTGGCCCAATGACTTGCCTTTCATTCACCACTATTTATGGTTAGAAAAA
TCTAAGCTTAGGTTATTGTAAGTGTTAGAAGAAAACAACAACACAACAGGCCAGACGCCC
ACATGTGTTTAGAAGGAAATCATTATAAAAAGTCAATGACCAAAAAGTAGAATAAATAGT
GCTAACCTATATAGTAAAACTGCACCAATAAGGCAATAAATATGTAGGGTGTGAGCATAA
GAAAGATGTGCAATAAAAATGTAAACAAACAACTTGCCGGGGGTGTTATAGTTTCAGTGA
CGTTCTGGTACTAGTACTATGCGCTCACATATTCCGACGTACTGATGAATAATAACATGA
GCATTTGGAAGTCAAAAATTCCGCTAAGAATTAAGTCTTCAAGGGATATATGAAAGGGAG
TAGTCCTAACCAAAGACAACCCTGCAAATAGCATAGCTAGGGAGTAAGAAGTGTAGATTT
TATACTCATGGCTTCACAATCATACATCTCTTCTTCCAATGCAATATTGCTCGTTCTTCG
TGGTCAGTCATCCAAATAGCGTCAAATTTGTATCCATACGCAAGTGTTGTCAATACTTTT
GGTCACTGGTTGGATGGTATTCCATATAGGTTAGAACGCTAATAAGGGTGGGAGTGCATG
ATTTGCTATGGTCACTTTGGCTATGTAGAAATGATTTGGTTCTTAATGACAAAATTGTTT
CTCATATGAATGTTTTTTTATTGTACGCACTCTTTTAATATGTGGTCTACTCTATAACAA
GCGGAGTACCAATCGTTGTTTAAGCTGGTGTATACGCAGTTAGAGCAAGTACCTAGGGAG
GGTTTTTACCCTACATGGATGGTAGTCTCCGGATCGGTCCACCAACCCAATATGCTTAGT
GTCGGTCTAAGACTCTAGTCTTACTGAGATGTTGGTTTTTTCTTGTTTTTATCAAACTTT
TCGGTGATTGGTTGTCTGCATCTTACTTACGGAGAGGCCGGATGTTACTCATCATGTTTT
GTATCCACGTGATGCTACATTTTGAGATAACAAATGCATCCTTTATAAAAAAAGTTTCTA
AAACTAGTGATACTGAATGTACATGGATGAGTTCTTTTGTTTATATTTCGCAAGATAAAC
TAAGAGTGACATATGTAGATAGTGATGACATAGGAAATCACATTTATCCAACAGGAGATA
TTTACCTCCTTGTCACCCATAGAATTACTGCAACGTAAGGAGTAGAGTGAATCATACAAA
ATGAAGTTTTCAACACTATACACAAATAGATGAGTGTGCTTCTCAAGATAGATAAAAGTA
TGTAGAATGTAGAAGCTCTGGGTACAAGAAGCAAGACTCGTGTAGGTTGTAACTTCGATT
CCACGATCAATCAAATAACAGCGAACCAACCACATGTTGTTCAATCGTGTAGTCATAGCT
ATCAAATCGCTGCCTAAGAGGATTTCACTTGCACCCTATGTTAATAATACGAGCGCATAT
CAACAAGCATATAAGAAATGTATAGTAAGGAAATCTAATGAGGAAACAAAAAGAAATCGG
GAGTTTAGTTGTCAATCACCATATGTTCATTTATATTGCAAGCGCTATTTCTCCTATGCT
TCTTAGAAGGGAGGGGTAATATCCTTTAGAGGTGGTTGCTATCAGCAGATGGACCTTGAA
TAGAGGGTCATGAGAGACTGCCAATGATGTGGGTGAGCTTGACGCTTGGGAGATTCTTAA
TGATATCTCTTTTTTGTCCGTGAAGACGTTTGGAGCATAGCTTGGTCGAACCGGACATAT
GGTATTTTGAGAACGAAATTGTGTCTACGAGGGACATACCTTACAGGTGATTGGTCCATG
CTGTGGGGAGTGTAAACCTATTTGCTTTGAGATGAAGATGTCTTTGGCGGAGCCGATTGA
GCTCGGGCTCGCTTGCCCGCTTATCGCGCCTTGATGACGAGCTTGTGGCTTGATGCTTCA
CTGTCGTATTGTCATTCAGCTCCCAAGGCAGCTGTCTGTTCCTTGCTCCGGAGGGAGCGC
TCTGTGTTTCCGTTGACGGTGATGACTCCCCAGGGTCCGGGCACCTTGATCTATAGGTAG
GCGTAATGAGGCACCGCGTTGAAGCGGGCGAATGCTATGCGGCCGAGCACTACGTGATAT
CTGTTGCGAAAGGGGACGATGTCGAAGATTAAGTCTTTGCTGCAGAAGTTCTCGGGTGAT
CCAAACACGACCTCCAGCGTTACCATGCCGGAGCAGCGGGCTTCGATGCGTCGGATCACT
CATTTTAAAGGTAGTGTTGCTGGATTTGATCCTTGATGGGTCTATGCCCATCTTTTTCAC
CGTGTTTGAGTAAATTAGGTTAAGGCTACTTCCTCCATCCNNNAGGACTCTAGTGAGGTG
GTACCCATCCATGATGGGTCTAGGAGAAGGGCGGCTGATCCTCCATGAAGGGTACTAGTC
GGATGATCCCTACGGTCAAAGTTGATGGGGCAAGCCGAAATGGGTCAACTTCGGGGCTAC
GGGCTCTATGGCGTATACCTCCCAAAGGGCTCGCTTCCTCTCCTTTGGTATGTGAGTAAC
GTATATCATATTCACGGTTTTCACCTCAGGGGAAACTGTTTCTGGCCCCTGGTATTCGGA
CCGCGAGGCTCCTCATCGTCCTCACTTTGTGGGCCCGTGCTTTGTTCCTCGGCTGCTAGT
TTGCCGACCTATTTAAACACCCAACAGTTACGGTTGGTGTGGGTGGCGG
