morexGenes - Barley RNA-seq Database

Contig contig_1611826

Source Contig contig_1611826

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1611826 (2335 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location

Predicted Genes from contig_1611826

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_22781	1	484 bp	MLOC_22781.1	Available	Available	None

CDS Structure of MLOC_22781

Contig Sequence (2335 bp)

>contig_1611826 2335 assembly3_WGSMorex_rbca.fasta
GGGTGGGGGGGGGGGGCGTGGCTAGGGCTCCGGTGGGGAAGGGGAGAGGGCGGTGCGGGT
GGGGAGGCGGGGGTCGGTGGAGAGGAAGAGGGAGAGGGAGAGGGGGGCGGTGGCGGGCGA
GGGGGCTGGAGAGGGCGGCGAGGAGGAGGGATCTGTGGAGGCGCCGCATCGCCGTGGGGT
TTAGCGGCTGTGGGGCGGCGAGGAGGGTTTAAGCCGGGAAACGTCGCGCGGCCAGTGCGG
CGGCGGCGGCGCCGGCGGGTAATCCGAGTGAGCAGCGACAGCAGCGATCGGCTCTCCCGC
TCCGTTGGGCTTGGGCACGGTTGGGCTTGGGTTGGAGCGCCGAGAGACATCTCGTTTACC
GGTCGAACGGCCAACTAGGCTCAGGTTAGCAGGCCACTGCGTCCACGCGCTGCGATCCTC
TCCGGCTGGCCTTTTTCGGCTTAGAAATTTCATTCCCTAAGAGAAAAAAAAAAGGCTTAC
GAAATTTCATTGTAGTTCGTTTTTTTTGGGAAATTTTGGCCAAAATTCTGTATAGAAAAT
AATGGTCGGCTAAGGGTCTCTGTCGACTATTGAAAATGAATCACGAGGAATTAATTAGAA
GAAATGAACGGAGTTGTTATATAGCAGTCGCACGGCTACCGCAAAATTTTCAATGCATCG
GCAGCCACACAGGACCACAAGATAACGGTTGTTTTACATCATTTCGTGCCTAAAATGCTA
CTCCAACGTTTGATGCAAAATAGGACACCCCACGAAAAAAATATATGATGTATTTTAGGG
CATCAATTTTACATCTTCTGTAGGAGAAGAAAATTTTCTAGCACCCTAAAACTCGCTTTA
CAGTGCCCTAAAATTGCTTCGTGTGTCCTATTTTACATCACATGTTGGGTATGTTCTAAA
AGCATAATACATGGTTCATTTTAGGCCTCACATTAGTCCATGCCATCAAAAGTATTTTGA
TTGCTTGATCTATTATTAATATCTCGAAATTAACAAGAGATCCATACTTACATAAGCATG
AAATCCTATTTGATGGGAGTCGATATTATAGGAGATTGTGTTGTAAACGAATGATGTGAC
ATGTGAGGATGCACGTGCCTTCCAAGGCTAGGACGTGGCCGGGGAAAACATGCTAGGTGC
AATGCATAAAATAGTTTATGCATACATACATTAGTGTTCTAATATGTCAAAGACAAACAT
GTCATCGATTAGAGTATTTAAAGACAATCGTTAGCGAATGAACCTAGAAAACTACTAAAA
CCTTCCTCTCACGGTCACACGTCCCATTCTCATTTGACTTTTAAAAATGTCATTCTTCCT
CTTATGTCTACATCCCGTTCTCATTTCATTGAAAAGATGTCTCATTCTCATGAGCGGAAA
ACCTTGAATTTCACATGCTCATGTCAGAACACAATTTATTCATTTGATGGAAGTCCATAT
TGTCGGAGATCGTGTCGTATACGGAGGTAGATTGCAAATCTAAATCTAGCCGACAATATC
TTCAATCGGGATGTGACTTCTCTTGTAAGGCTCAAACATGGTAGAGAAAACACCGTAGGC
ATAATGTATAAATGTATAAAGTGGTTTATGCATACACACGTGTGTGAGCGTACTAATATA
TTGAAAGCCAGCCATGCCATGAATTAGAGTATATAAAGAAAGTTGAGATGAATGTTAAAA
CATCCACTAGAACCTTCCTCTCATTTATACACATCTCATTCTCATTTCCTTAAAAAAATC
GCATTCTCATTCTTCCACTCATGTCTACACATGTCATTATCATTTCAATAAAAAAAATGT
CTCATTCTCATTCCTATGAGAAAAAACCCGCAAGCTTATGTAAGAGCACAAGAAAAATCT
CCGCACAATGCAAGGTTAGCCAAAAAAATCATAAAAGCTCCATTGTTTGGCATATGGTAT
ATATGAAGAAGATGTGTATGCTTAAAATTCTCACAACTAAGCGATATATCATGTCGGCAA
TCAAGTGAATCCATCTTTTTATTACTAGGTCACAACCAATAAATTAGTATAATATATTTG
AACCCCTCTTTTTATTACTATATCACAGCCAATGAATTAGTACAATACATTTATCTATCT
ATCTATCTTCTATTATATACTAAAAGCACAATACGAAGGAAAATAACAAAATGTCCTAGA
AAATCCCACAAAAAGGCAAAACCCTAAACATATATGGGGTTATATCGCCAGGACCCTTAA
TTCCAAAAACAAAATTAACACTTAGATCAAACCCACACTAGTAGAAAACAGGGCTACCNT
TCGGCCCTGGCCAGCCCATTAGCCCCGGTTCTTCAAGAACCGGGACCAATGGGGG