morexGenes - Barley RNA-seq Database

Contig contig_161159
Source Contig contig_161159
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_161159 (6831 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_161159

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_22762	1	587 bp	MLOC_22762.1	Available	Available	None
MLOC_22764	1	1083 bp	None	Not available	Available	None
MLOC_22763	1	1347 bp	None	Available	Available	None
CDS Structure of MLOC_22762

CDS Structure of MLOC_22764

CDS Structure of MLOC_22763

Contig Sequence (6831 bp)

>contig_161159 6831 assembly3_WGSMorex_rbca.fasta
ACATGTACACATGGAGCAACGTGCATGGCGTAGATCTCAACCTGTAATAATCAATTTGGT
GGCATGAATCCATATACTAGTATGTTTAGAGCTACCTGCTAGGTTCCCTGGGTGCTTATA
AATAACATTGCTATGCTCCTTCATATGCACACCACCATTTACGCTTTGCGTCGAGCTTTG
CACACTCTTCTCCAATATGGCTCCCACTCTCGTTCTCGCACTCAGAGCGGCAACCATGGC
CGCCATGCTCGCCGTGATGGTCCTTCCGTCCATGGGGCGATGCCCGTCACTGGGCAAAAA
AGAACTAGGAGCGACCATGACCCCAGCATCAGGGCCGGCACGGGCAATGAGGTGCAGCGA
GTGTGGCCCGCACTGCACGGAGCTGTGCGGAGTCTCCGTTCCCCCGAAGTGCCGCAAGGA
CTGCGACATCCCCAGCTGCGAGGAGGACTGCCGGTCTGCCGCGATCAGCAAGTGCAGGGC
CGGCTGCTCCACCGGAAGCTGCGACTGCGACGGCGAGGCGACAAGCTCATGCTACGCCTC
TTGCTCCGGCAGTTCTTTTTGCTCAGACTGCATGCGGTTAACTAGTAAGCAGTGCACTAG
TGACTGCAACAGCAAGTGCGCTGCCACCTGCATATGAAGAAAAAGTAAATAAGTCGGTTG
GGCCTCTTACAGGTGTCCTATGGTATGGATGTTGTAATTGTCATAAATTTGTACTACCTT
TCTTCTTATCTAATAAAAAAGTTATATCTTATTTTTACTCCTTGTCATAAAATAATACTT
GGCAAAGTATAGCTTCTCTGGCGTGGGCCTTCTGGGCGCAATGAAATGGCTCTCTCAAAG
ACACCTTCCCTAGATCCGTCGAGGCCTTGCCGTTCACTTGCCGAGTTGTGATGTGCCTTG
GTCGTTCTGTGCCTTGCCTTATGCTCATTGGCACAAGGCTGGACTAGAAAAGCATGCATA
TTAGTAGGCAGGTTGCGTGTTCGTGATTATTAAGCCGGTCAGGTGATCTATCTAACATGA
ACGAGAATCACGAACTACCGGGCCGCCTCTGCTCGAGCGACTCCGGAGGCTCCTCCTAAC
CGTAGCCAAGCCTTCCTCAGTCTGTATCGCCGAAGGTGGAGGGCGGTGGAGACACGCACT
TGTGGTGCATTTGGGCGGGGATGCACGGTGACGTACGCGCGTTGATAGCATGCGGACATG
AACATGACGTGTGGCAGCACAAGAGGGCCCGATTCAGGGCCCGATCTGGACCAACGGGCC
GCGGCCACGACGCTCTTCAGGAAGGCCGGTTGTCGATGTTGCAGTTGTGCTCAAGAGGCG
GCGGTGCAGCCGCTGCTTTGGTTTGATATGAGTCCAACGGGCGGTGGCTGTCACTCGCGC
AACAACGGATGACCTGCGTGGTCGGAGGATTCGTCTTCTCCTCTCCAGTCGGTCAGTGCC
GTGGGGGCTGCTTGCTCGGAGTGAATAAATGTGGATTGGCCCCGCTAATCTTTGAGTGCC
AAGTCTTCGATCTGCTATATGCTGGCATCTTGATCGTTTTGTCGACTAGTTGCGATATTC
CTCTTAAAAATTTCCGATGATTGATCCATGGTGTCACTGGATATCTAGATCGATTTTATC
TGGTCGTGTGCTCCCTTATCTTCGGTCAGAGTGGCTTCATGAGGGTGTGGCGCAAGGCTT
CACAATCTTGCCGGTGTCATGGGACATGTCTAAGTATATATTTTTCATGCATTGCCAGTG
GTGAAGAAAGTCATGACGGACGCAATCAAAGACATGTAATGAGAGCGAGAAGTTTTGGTT
ACGATAAAGACTTGGGACACATGTTTTTCCTATGTGTCGGGTGTTGAGTACTTGGAGAAG
CGGTCTTAAAACATGGGGCGGCAACACAGGTGGAAAGCATTTTTTTCTCCGGGGGAGTGA
AGTTTTGGCGGCAGAGGATTTTTTCTCCGTGTGTTTGGGAGTTGGGGAAAGACTTCGTCG
GCTCTGTATAGGGGGAGGAGTTTCGGAAATGCCTTTTGGAGCTCGGGCTCCATGATTCCC
TTTATTTTTGAAAAAATCAAAATTCAAATTTGCGGTTTCGAAAAAATTGAAAAAAAATAT
ACAAAAACACAAGGATGAAATATATATGTGTGCGAAAATTGAGGATGCAATACCTTAAGA
TGCGACCTGTGCAAAAAGAACAAATTCATGGACTTTTGGGATGAATAGTATCAATGTGTT
AAAAATCCATAAATTTGTCTTTTTTTTGCACATACCTTCTTTCAGCGTATTTTTTCCTAA
ACATTTGCACACATGTGTGTTATGCCTCCATGTATATCCGTATTTTTTCTGAAATTTTTG
AAATGTAAAAATACGAATTCTGATGAATTTTGGGGTTTTTAAAAATAGGCCTTCATGGAG
CCCGAGCTCCAAAACACCATACCCGAGGAGTTTTTATAATAATGTTTTGATCTCAAAATC
AGAATAGTCCTACTATATATATGATGTGCATGTATGGTGACATGTGGATGGCTTGTGTTG
CATCGCTGCCCTCGTGAGGAAAGAATCAAGCTCCTTTGCCCTCGTGAAACACCACCATCA
CCACCACTAGTACGAAGCTCAATAGGAAAAATAACAAGCACAAGACATGTACACATGGAG
CAACGTGCATAGTGTAGATCTCAATCTGGAATCAATGTGCTTGGTGTATGTTTATTAGCA
CTGGGTGCTTATCAATAACATTGCTATGCTCTTTTATAGGAACAATTTTGGTACAATTCC
ACCCATCATTCAGCTATTGGCATGACACCCTTCAAAGCCCTCAACGACCATGAACCAAGG
CACTAGGGTCTGACCAGCTCATCTTCGTGCTCAGTTCCAGTCCTGCAAAACTGGCTCGAG
GAGCGCAATGTCATCCAAGACCTGCTGCAACAGCATTTGAACCGTGCCCGTCAATGCATG
AAAACACAGGCTCACAAGAAGCGCTCATGGTGGCAGTTTGAGGTGAGCGACAACGTACTT
CTTAAGCTCCAGCCCTACATTCAGACTTCGGTGGCACCTGCGTCAATCACAAGCTATGCT
TCAAATACTTTGGCCCTTCACGATCATCGCCAAGATCAATGATGTGGCATACAAGATTCA
GCTTCCACGTGACGCTATTGTCCACCCAGTCTTCCATGTGTCATTGTTGTGTCGTGTGCT
CCTTCCAGGTACAGAGGTATCTACTTCCCTACCCATCGATGCATACATTTTGGCAGTGCC
AGTTGAGATCTTACAGACGCGCTGGCGCAAGAGTGCGGATGCCATGACAGAGCAAGTCAA
GGTCCGTCGATCAATAGGCAACTCCATCGATGACACATGGGAGGACAAGACGACGCTCCA
AGCTCGATTCCCACATGTTGAGGCTTGGGGTCAAGCCTGGCGCAAGGAGAGGGGAATGTC
GGCATCCCTGACATACATGTCCCACCAAGCGGCACAGCGGGGCACGACGAGTGCTCGCAG
CGCATCACCAAGCCCAACCCAAGGTCCAGTGGGCCCGAGTGGAACCACCTATCTCTCTCT
CCGATTCCTTCTTCTTCCTTATAAGCAGCTTGTACTAGACAATCGTTGAATCTGAGAAAT
CTAGCTACTGTTTGAGAGATCCCTACCGAGTACCTAACAGGAGTTCATGGCCCTGATTGC
AGTGATGTTGGAGAGCTGCATGATTTAAAGATTGGTGGTCAGCTACAGCTACGTCAAGTA
CAAAATGTTGAAAAAGCAGAAGCAAAAGTGGCAAACCTTGGAAACAAGAAGGATCTTAGT
GAACTGACATTAAGATGGACTGAGGTTGGCGACAGCAATGTGCCTCACAATTTCAAACCT
CATGGTGGGCTGCAGGTTCTGAAAATATATTCCTATGGAGGACAGTGCATGGGTATGTTG
CAAAACATGGTTGAGATCCATGTTTTTCTTTGTGAAAGATTGCGATTTCTTTTCAGACGC
ACTACATTCGTCACTTTTCCAAGACTGAAGGTCCTTATGCTAGAACATTTGTTTGGTTTT
GAGAGATGGTGGGAAATAGAAGAGAGGCAAGAAGAACAAACAATATTTCCTGTGCTTGAG
AAGTTGGTTATTAGTAGTTGTGGAAAGTTGGTGGCATTACCTGAAGTGCCATTGCTGCAA
GGACCTTGTGGTGAAGGCGGTTATACATTGGTACGCTCAGCGTTTCCTTCGCTAAAGGTA
CTCGAAATGAATTTGTTGACAAGCTTTCAGAGATGGGATGCGGTGAAGACACTCATGGTG
AACACATAGTATTTCCTCAGCTTGAGGAACTAATAATTGAGGGATGCCCAAAGCTGACAG
CGTTACCTGAAGCACCATTGCTGCAAGGACATCGTGGTGAAGGCGTTGTCGGTGCAAAAA
TGGAACCGTCACACTCTGGCGATCACTGGAGACAAGGTCTGATGGAAGGACGATGAACAC
AGGGTATTTCTAGGCGCTCGAACACCTCCGCCGCATGAACGGCGCACACTGTATTTCTCC
CTGAGCACAAACTCAGCTTTTCTTCCTCATCGGTTACAAGAGCCAGGGGTGGGCTTTATA
CGCCGGGCACGCCCACACGCGCTGCACCGTGCACACGCCCCACTCGCCACTCCCCTCACC
TCCTGGGCTCGCGCACCCGCCGCGCACGTACGCGGATGACGCGGCCATCACCAGTGCACG
CGACTAATTCGCCCTACTCCCGCGCTTCGGCAAGCAAAAGATTGATTTCCCGGTTGATCC
AGGGGACAAGTGCAGGTATATAATCGTGAATCTGAGGCCTTCGGACAGATTAAGCGCATG
CGCTGATGCTTCTCCACCATGCATGAGATTAATCCTAGCAAGATCATGCACACATGCATT
AGATTAATCCTAGCAAGATTAAGCGCAGGCGCAGGCGCTGATGCTTCTACACCACGCATG
CATGCTGGTGGATTGCAGCCTCTGCTGGCTGCCTTCGCCGCCGATGCAACGCTGCCTCAG
CTGGCCGCCGTCATCATGATTTCCCTTCTTTTCCGTCAGCTGGCTACAAGATCTGCACGA
GATCATCTTCTCACTACACAATCTGCACGAGATTAGTGGCAGTAGTTCTTGCGCCTGCGG
CGGCTGCGAGGTGGAGGAGGAGGAGGGCGTCATGGATGAACGGTTTGTGTGCTGTCTGTG
GAAAGTCAGGAAATGCCCGGGTTGATCGCTAGTAGTAGGTGCTCTCGGTGTGGCTGGGTG
GCTCTAACTTGCCGTTTCCAATGGAGACGGCGCGTGCAATCGAAGCCAACTGTGGGCAAT
GGAGTCCATCCGTCAACAGATACGATGGCGTGATGGTCGTCCACTATTAAATGAACATGC
TATGAGTACTCTGGTAGTGTTTTGTTCTGCTCTTATAGATTTCATTTGAATGGTGATATC
TTCCATGACTTGTTTTACCAATGGTACCTTGTTGTTTTGAGAGTGTGAGCACGCTATTTT
TTTTTTTGCAAAACTACAATGATCCTTGCAGGTGCGAGAGGGTCCTCAAGAGGCTGTTTA
TTGTTAGAGGCCATGACGAACAATGGGAACGACATCCTTGGATGGATCTGACAAACTTGA
CGGCAGATTCTGAATCTCGGCTGTCCAGCAAAAGAATGTCATTTTGAGCAAAGGGGTCGA
TGTAGATACATGGTGTGTCTGTCTTTTCAGTTAGTCATTCGGTTTGGCAGGTCGGGGAGG
AATTAATACAGTTTCAACTTGTCGAGAAACTTTTCAGATAGTCGTCATGAACTTTATTTA
TATTTTATTTCAAAATTTAAACAACTAGTTTCGGCTGGTCACACATAAGGTTGTGTGACA
CTTTATTTGTCACCGCTACATCGACTAAACAACGGTGATCCAACTATATATCTCTAGAGA
CCTTTTCTTATGATTAGACACCAACTCTAGTGCCAACGCCGAATGGCATGATGTCATACA
ATGGCACATTAACATTGCACATCGTTGGTAGGGTACGCAGCGCAATGGAAGTCGTCGCCT
CAAGCTGAGCTATCTGGTGTGGCTGCAAGAAAACACTCTGTGGTACCTGTTGTGGTTGAC
CAAGTTGTTGTGGTTGAGGTTGTTGGAAATAACATTGTCCGACTTGCTCCTGCTGCAACT
GTTGTTGGGGTTGGGAGACACCTTGGACCGACTGTTGGGGTTGTTCTTGCAGAAAGATAG
AGTAGACGATTGCACGGATTGCCTCATGGCGGAATTGTTCGGGGATTTGCGGCAGTTGCT
GGCAACATTGTTGCTGCAACACATGGCAGCTGCTCTGCTGCAACATTTGCGACCTAGCAA
TAAGTTGTGGCATTCGCACGGGGCTGCACTGCTGCTGGAGGAATACCTTGCATGGGTTTA
GCTGTTGCAAAATAGATGGTTGAACATAGGGTATTTGTAGTTGCAGAAGCGTTTGGTACA
GTTGTCCTTGTGGGAGTGGTGTTTGTTGTGGTGTACATGGTTGTTGTTGCGATAGAATTG
GTTGTTGTAGCCCAAATGGTGGTTGCTGTGGAAATGGTTGTTGTGGCCAAAATGGTGGTT
GTTGTGGAAATGCTTGTTGCGGTGGGAAGGGTTGTTGTGGATATGGTTGTGGTTGTTGTG
GTTGTTGTGGGATGGTTTGTTGTGGAAATGGTTGTTGCGGTTGGAAGGGTTGTTGTGGAT
ATGGTTGTGGTTGTTGTGGGTATGGTTGTGGTTGTTGTGGGATGGGTTGTTGTGGAAATG
GTTGTTGCTGTGCAATCGTACTTGTTGCCGCAATGGCGAGGAGTGCAAAGATGAGGAAGG
TCTTCATAGTGGATTGGTGTTAACTAGTGTTTCTTGGTTTTGATGCTTGTG