morexGenes - Barley RNA-seq Database

Contig contig_1611193

Source Contig contig_1611193

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_1611193 (2393 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_1611193

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_22739	1	752 bp	AK353643	Available	Available	None

CDS Structure of MLOC_22739

Contig Sequence (2393 bp)

>contig_1611193 2393 assembly3_WGSMorex_rbca.fasta
CACACGGGCCAAAAAACGTGAACGTGAGGAAACGGGGAAAAACGGGGTACGACGGCCGTG
TTGCAAAAAACGTAATACCTACGTATAGCAAACATTAAACCGCGGCGGGGACAGGGAGGC
CGGCGGCCGGCGGGAGCGGAGGGCGGACGGGGGGATGCGCATCGTGGTGCCGCTGCAGGG
GGTGGTGCAGGGCCGCGGGGGCCTCGTCCTCGGCTCCCTCATCCCCTGCGCCCTCTTCTA
CTTCCTCCAGCTCTACATCAAGCGCAACCGCCCGCCCCCAGGCTCCCCCACTTCGGCCTC
CTCCTCCTCCGCCGCCGCGCCCCCCTCCGCGGGCCCGCTCTCCCCGATCCACCGCTCCCT
CTCGCGGGGCCTGCTCTCCCCGCGCGCGCTCCCGGCGCTCTCCATCCGCGGCGCCGTCGT
CCGCGCCGGGGACGAGGACTCCCTCTACTACGCCGGCCTCCGCCGCTGCGCCGACGACCC
CTACCACCCCGCCTCCAACCCCGCCGGCGTCATCCAGCTCGGCCTCGCCGAGAACCACGT
AAGCGCCTCTCCTCCCTCCTCCCCCCATTCCTCTTCTCTTCCCTTCCGGAACAAACCATT
CCTGCTCCGTTCTCGAAATCAGTATCCACAGATAGATAGATTGACGTGGTCGGTGCTGAT
GATTGTGCAGCTCTCCCTGGATTTGGTGAGGGAATGGATGGAGGAGCACGCGGGGCGGGC
GATGACGCCCGGCGGAGGCGACGAGGAGAGGGACCTCACCATCAGCGGGCTCGCCACGTA
CCAGCCATATGACGGGATACTTGCCTTGAAGATGGTAAGCCTAACGGAACCAGCCCCTGA
TTCGCATTCTGATTCTCATCCCTTCCATCCCATCCATAAAAAGGCTTCCAATTCTGTTAA
CGCCGGCAATGTCAAAATTAAGTGCTACCGGAATCTTCCTTTTTCCGATTCCACCGGACA
GAAACAGCCAGACTATTGTTCGATTATCATCAAGTTTTCTGCAATTTGCAGTCGCTGGCT
CAAAAACTTGTTTGTGCACATGGAGAAGTATGATATAATTAGCTTGCGTCACATTCATAA
ATACATTTGATACCTTCAGTTTTTGTCTTTCATCTATGCCATCTTTGGCATTAGTAGTAC
GACTGTTCTGATTTGGTTGCGTGGGCCTAGGCGGTTAGCCACAGTTTTGGATCAGCTCAA
TCGAAGAAACAGTGTCCAGTCAATTATTGAACCTAGGAATAATCGTATCAATTCCGCTAG
AATTTTGTGTGGTTAAGCCCTGGGGTGAGGTACGATTGTTGAAATGATGTTGCGTAGTTT
GCTGCCTTTTCTCGTTTGAATTTTTGTGGCCATATACATGTTATCTGCATCTAACTGATA
TGTGCCAAAGAGTCACCATCTCATGTCTGTTTGTTTTTGGTTGTCAATTTTAGTTTTGTT
GCTGCAATGATGCCATCTGTCAACTACTGACTTCTGAGACATTGTCATTTTGATCAGCTC
ATTCCTGAAACAACAATTGATTTTCAAGATTTTCATTTCCATGATCCTGTGTCTTTTTAG
CTGCTGTCAACTGTGTGAATCTGAAATGAAGGCATACTTCTAGATAGATCAGACCTTAGG
GATTAATTTGGATGATGTGCTCCTAAAACAGCGCACCATTCCTATTTTATAATTTGAGCT
GCCTTTTTTGTTTTGCTTATTTTTTCTGTCTTTTGTTATAGCCTTTTAGTGGATGCTTTC
TATCCAAACCAGTTAACGAATCTAACCAAGCCATTCTGCATTGTCATACTTCTGTTTTAC
TCTTGACCTCAATTCTGGTAGTTATTTTTCAAGATTAATACCGAAACGATAGCGTACTTT
AAGACGTGCTATCATGTTGATATATTAGAAAATAAATTTAATGATGAGCCCCTTTGGGCA
CAAGTCATGCAGAAATTATGCTGAGATGCCACCCTCTTTTCCACATTAATATGTTGTTGC
TCGTCCTGTATTAGCTAGATGGTCATTAAGTTGGTACAGAAAACTCTTTAAGTTTTTATT
AGTATATTTTGGTTCTGGCACCAGATAATCAAACTAGTTTCCATGGCTAAGCTTTTTATT
TTTCCTAATGGGGTAATTTTCCAATATAAACTGTTTTTCCTCATGGGGTAATTTTCCAAT
ATAAACTGTTTTTCCTCATGGGGTAATTTTCCAATATAAACTGTTTGATTTCATTTTCAG
GCTCTTGCTGGATTTATGAGGCAAATCATGCAAGAGTCAGTATCCTTTGATCCATCTCAA
ATGGTGATAACATCTGGTGCGACGCCTGCAATGGAAATACTGAGCTTCTGTATTGCTGAT
CCAGGAAATGCATTTCTTGTTCCGTCACCATACTACCCTGGGTATGTCGATCT