Contig Data
morexGenes
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Map Locations of contig_161116 (3099 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_161116

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22738 1 608 bp MLOC_22738.1 Available Available LOC_Os04g10460.1, FRAME:+2, EVALUE:3e-64, 13104.m00941 protein amidase, putative, expressed
MLOC_22737 2 1493 bp AK371559 Available Available None





CDS Structure of MLOC_22738






CDS Structure of MLOC_22737






Contig Sequence (3099 bp)

>contig_161116 3099 assembly3_WGSMorex_rbca.fasta
AGAGCGTTGTTGAAGTAGTGAACGAGTCAGATAAGAGAGAAGGTGGGGGGGGGGGGGGAG
GGGGGGGGTAATTCATGGGAGCAAGTCAGTTTATCTTGTGACCCGCAATAGTTCATCAAA
ATAGTGATTATTTGTGACGGAGGAAAAAAATGTGAGGTCTTACTTATATCCACTAAATCA
TATTTTTACATGTGGCAAGTGGTCGATTCTCAGATCAATTACTGCAAGCGCATATGATAT
ACCACGAATTACATCCAAAATTTTGTTCAAAAGAGATTTAATACTCAAGAAGTGGTTTTT
GAATAACTATGCAGTGAGTTGCATAAAGTCTGGCCATGAACATCAATTAATGTATTGATT
AGAGTGCAACCTCCTCTTCCTAAGAAGTAAGAAATGTTGCACAAATTCCACTTTGATATT
CAACTGACCAGTAGTTGGCCACTTGCTACTCCTTACTAGAATTATAAACGCTCCTAGTGG
TCCAAGTTAGAGAAAACAACATGCCGGAATGACAATTCTTATTATGTAAACGAACTATGT
ATGTTTTATCTTGATATTTTTCAACGGCAGGCCGATTTGCCGCACCGTGACAGATGCGGT
ACACGTGTTGGACGCCATTGTTGGCTACGATGACCTCGATGGGGCAGCCACGAGCGCATC
TTCTGAGTACATCCCTCATGGTGGATACTTGCAGTTCCTGAAGACTGATGGACTAAACGG
GAAGAGGATCGGCGTTCCCAATGGCTTCTTCAGCTATCCAAATGGCACCGTGCAACACAC
GGTTTACCAGCAACATCTCGACACAATGAGGTACTATTTACATCTCTTTTCTTTTATAAC
AGCATATAAATCTTTCGGCCTTTGCACTGTCTGTGGGATGAGCATTGTCCAAATAATTGC
AAAGTTTATTGAAAAATGTATATGAACCCATAAGCTATACTATATATGATACCATTTAGA
AAGAAAAAAAAGGGGGGGAAGTATACCTCAGGCTTCTACGTTGACTGTATATGGTATCAT
ATCATCTTGCATTTTTTGTTTGTTTGAAGGAAACAAGGAGCAAACGTGATTGAGAATCTC
GATATAGATAATTTAAATGTCATCCTGGACACCCTTAACAATGGCCAAGAGATTGCATTA
GCAGCAGAGTTCAAGTTGAGCCTCAACTCCTATCTATCAGACTTACAATATTCTCCAGTT
CGCTCGCTTGCAGAAATCATAGCCTTCAACAATGCCCATCCTGTCGAGGTCAGCTCAGTT
CAGAATCAACTAATATTTTCATGCAAAAAAAAACATGTATTTTCTCAGCGTGTCACATGC
TATCTTACAAATTATGTTTTCAACTAACTGAAATTGTAAGATATACATCCATGGCAGGAA
AAGATGGATGAAATAGGGCAGATCATCTTCCTAGTGGCCGAGAACACGACCGGCATTGGT
GCCATCGAGAGAGAGGCGATCAATAAGTTGAACAAGCTGTCTTCCGATGGGCTTGAGAAG
CTGATGAGGGAGCACGAGCTGGACGCGATCGTGGCGCCCAACAGCGCCGCGTCCCCCGTA
CTTGCCATAGGCGGCATGCCAGGCATCACCGTTCCTGCCGGGTACGGCGAGATGGGGGTG
CCGTTTGGTCTCAGCTTCGGTGGGTTGAAGGGGTACGAGCCAAGGCTGATCGAGATGGCG
TATGCGTTTGAGCAGGTTACCATGGTCAGGAAGACTCCCACGTTCTTGCCATAAAACAGA
CAAGAGAAAGGTGGTATTGAGATTTATTTTGTTTGTTTCACAATATTTATGTATTTATAG
GGTGTAATCATTTTACGCAAATTTGTCGACAAACATTTAGATACTTTTCAGAAGATCTTT
CCAGGAAATGTATCATTTCAAAAGTGACTGAGACAGGCATACTCATGGAGCATCTGAAAT
GTGTTGATCAGTCAAGTCTTAAACAAAATATGGTAGCCAATCTTTTATGGAATGTGTTTA
GCCAAGTCTTAACCAAAATATGGACATAAAAACTAAATTATGAACATATGATAAGAGACT
TTAAGAGCAAGTGAGAGCTTGCAATCGTGTCATCAAGCAAGACATGAGCTGGGATATATT
TGCGAACATCCAAACACATAATGAATAATATACGGTTTATAGCTCTCAAATTGTCGAGTA
AGCAAAAGTGTACAGAAACCAAACCAAAAGATAAACAAATAATGGCATCAAACTGTTTAT
AAAAGCCTTATAGATGTCGGTTATTTATTTCATTTGTTTCACAATATTTATGTATGTATA
GGGCGTAATCATTTTTCGCAAATTTGTCGACAAACATTTAGATACTTTTCAAAAGATCTT
TCCAGCAAATGTATCATTTGAAAAGTGACTGGGACAGGCATACTCATGGAGCATCTGAAA
AACGCCAAAAGCGACTGCCACAAAATATGTTCAAATTCCACTAATTCAAAGCAACGAGCG
CATTGGCCAAGCCACTAACCACACCGACACCGACACCGTCTCGCTCAGCTAAGCTAAGCA
TTATGGCTTGGCTGCCGCCGTCCTCACTCTGGTCGTGGTCACCGTCGCCGGCGCCGCACA
CGGCTTTGAGTTCCACGAGGCCACCATCGACGCCATCCAGCTCGGCTTCCGCAACGGCAG
CCTCACCTCGACGACGCTCGTCCGGTTCTACCTGGACCAGATCAGCCGCCTGAACCCGCT
GCTGCGCGCCGTCATCGAGGTGAACCCGGACGCGCTCCGGCAGGCGGCCTGCGCCGACGC
CGAGCGCGGCCGCGGCCAGCCCACCGGCGCGCTGCACGGCGTCCCCGTCCTGCTCAAGGA
CAACATCGCCACCCGCGACGCGCTCAACACCACGGCCGGCTCGTTCGCGTTGCTCGGCTC
CGTGGTGAGGCGGGACGCCGGTGTGGCGGCCAGGCTCCGGCGGGCCGGCGCCGTGGTGCT
CGGCAAGTCCAACTCCTCCGAGTGGTCCGAGTTCCGCAACGTCGACAACGGGTGGAGCGC
GCGCGGCGGCCAGACGCGCAACCCGTACGTGCTCTCGGCCGACCCGTGCGGGTCCAGCGC
CGGGTCGGGCGTAGCCGCGGCGGCGAACATGGCGGCCGT