Contig Data
morexGenes
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Map Locations of contig_160988 (4111 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_160988

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_22660 1 1144 bp AK363303 Available Available None
MLOC_22659 1 308 bp None Available Available None





CDS Structure of MLOC_22660






CDS Structure of MLOC_22659






Contig Sequence (4111 bp)

>contig_160988 4111 assembly3_WGSMorex_rbca.fasta
CCACTCTTGCGACACAACGAGTTGCGCTTCTATCCCTGACGAGGCCTTCGGGCCAAATTG
ATGATAGGGTCGCATCTTGGGCGTGACAATGTCGCTCTCGACGGCGTCGGCGCGGGAGAA
GAGGAACGGCACGCCCGTGGCCAGGTCGTAGCACGGCGCCTAACCCCGTCGTGGCCACCG
TCGTCGGACTACGTCGCCCCTTGCGAACACCGGCGCCAACACCTCCCCTCCCTTGTGGCT
GCGGCGGCGCAGGGCTGCCCTCGGCCTCGTCTTTCTTAGGTCTTGCGGAGTGACCGAAAG
GGTTGGGGGAAACGACCAGTTCATGTCTGTATCGGATACCGGCCTGTTACAGACGTAAAT
CGAAAAACCGGTGTAAGATTTACAGCCCAAAACGGTAATCCAATCACCTATATGAAACCC
ACCTGTTTTTTCCCTGCAGAGGTATAATTTACAGGTGGTTTGGGCAGCGAAACGACCATC
CAAGCAGGACCTAATGAAGGATAGCTCATCCTTATCAAAAATATCTAAAGTTCTAGGTTT
GTCATAAGTCAAACTGCATTAAGTTATAGCCAAACTTACTAATTTCCATATAACGTCAAA
TATATACTTTATGAATGTAATGAAATCGACTTGATGTTGTACTAGTTTAAGTATTTAGGT
ACTTACTCTCTCCGTTCCTAAATACTCCCTCCGTTTCAAAATAACGGTCTCAAGCTTAGT
GCAACTTTGTACTACAGCTAGTACAAAGTTAAGACACTTATTTTAGAACGGAGGGAGTAT
AAGTCATTTTAGAAATTTCACTATGGGACTACATACGAAGTAAAATGAATGAACCTACAC
TCTAAGTGTGTCTATATACATCTGTATGCAGTACCTACTAAAACCTCTAAAAAGACTTAT
ATTTAGAAACGGAATGAGTAGTGTTTAAAAAGTGAGCACTGCATGTAACACCCGAGTACC
AGAGCTTTCAACCGCCTAATCATAAAAATACGCCTCTCATTAAGACGAGAATTGAACTAA
CTTCCTTTCCGACTCATGTGCAAGCTCGGGTGCAATTAGTGGTAATACACGTTGCTTTTT
CGATGTTAATTGCTCCAAAACTGAATGTGCACAATGGCCTTATAGTTTATAATTCCGCCT
ACAGATCGGGGAAACACAAAATTCAGTTACAAGTTCAAAGCCGGCTTCGTTCAGCTGCGG
CTACCAAAAGAAATCGCTCAAAGATCCTAGGGCAAACGTCTCTAAAGACCCCAGATGGAG
CAGAGCACGTCCATCCTGGACAATCTCAAGGAGCTGAATGCCCTGAGACCTCCACTTCGC
GTTGTGCAAGCTCGTTTCCTTTTCCTTGGCAACGCGCCACCGGTGTTGCTAGGCTCCAAA
GCATCAGCCGCAGCTGCTTTCCTCACAAACAGCGCTATGAAGAATCCCTCGAGGTCATCC
TCAGGGTCTGTCCGAAGCAAATGCTCGGCTGCAAACAAGGAAAGCCGTGAGGGCGTATAA
TTTCATGTCAACAGAAAGCCATCCAGGAGCGTGTTGTTGAGTTATTCAGGTAAGGAGCAC
GTACCTCCGTCGAAGACTGGAAGGCCACGGCGCCTCCATTGAGGGAATGGGGTAGAGAGC
TCGAAACCTAGTGATGAAGCTAAAGGCAGCACAGAGCTGACGACGTCCTCATTCTCTGCT
TGGTGTATTGAACATGTGCTGTAGACCAATCTCTCTACCGAGGGAACTGCAGACATGGAT
GGAAGCTTTTCGCTTCAGTTTCTGCGACAGTTGTCCATTGAAATGCGATCATTGAACAGA
CCGAGTAGAGTAGGAACTTACATGATAGAGCATGTGAGAGAGCTTTCCGCTGAAAGGCGG
ACAGTTTCCTAATTCTTGCGCTTGAACCTGCATCACCCTGATCATCTGCAGAACAGGGTT
TCTTTCAGTGTTAAATGTTGCAATTGGATACTGATATGATGGTGGTGGGGTGAATCTGCT
TCCCTCACTTGCATCTATAAAAAAAAGTAGACCTTACAAGACATCCCTGACACTCAAATG
CTTAATTATTTCAGGCAAAATTGACCAAGCAAGCAAAGCCCCTGTGCCAACTACAGAACT
ACAGAAGGCCAGATGACCCCATCAGAATATCAAACTGCACAGGATGCTAACAGAACCTTA
GCCTTCTTATTGTCCAAGAAAAAGAAAAAGAAGTTCATTTTCATGGCTGGTGGAGAAAAC
TAGGGTGAACCCAATGTGGTATGAACACACATTGCTGCCATGCAGATTCCAAGTTTCATA
TTGGATAAGAGAAGTACATATATGTCAGTAAGAGCAGCCTCCATAGCATATGGTTACCTA
TAGAATGTGAAGGAAGCAAGTGGTCGAGTCTCTCTGTAGAGATTCCAGATCCAGAGCAAG
AGGGATCTAATAGAATAGCACGAACCTGCACAATCATCATTGCAATGAAGTACACTACAC
AATTAGGGATGATTGTTCGACAAGACAAATAAAAAGCTCAAAAGATGTATGCTTGTCTGA
AGTTTACATCAATAGACAATAGATCATTATGGATGTCAATACATGAACTTAATCTTTCTA
ATAATAGTAAGAATAACAATACAAGTACTACAAACCTCTGCATATGAAGGATCATTGCTA
TCTATATTCAAAAAGTCACCAATAACTGTTTCAATATCTACAAAACTGGTTAAGAAAATC
TGATCATTGTATCATGTCAAAAACTTTGCAACACATAGTACATGGTGAACAGGTAGATAC
AGTTGCAAATTGGAAGTAAAAGATTACATACAATTAAACAAACAAATGATCACCATAGAT
AGTCCAAATATATCACAGCGACCCCCTTGACATAATGGTTAGTGTATTATACTTTAGAGA
AAAATGATATCAAGGGTTGGGTCAAAGACTCAAAGTAACCAGAAGACAAGGGAATGCGTG
ATCATTTCCACATACACAAAAAAGGTGCAAAGATATGCCTTATTGAAAGATGGAATGCTG
TTAGTTTTGTGCCCTTGTGAATAAATGTCAAACAAATATATGAAAGCTACTGTCACAAAA
CAAAAGTATTTGAAACTCTCTCGGGTGAGCAGGGGATTTGTATTGAAGGTCAAAAGAATT
CACGAGGTACTTATTTTATTGCAGAAATTATGCGAACTTCTAAACATATTATTTTCCTAG
ATTAAATGCAAGGTGAAAAGCATGATTTAACAGTAAAATAATGCACAGGAAATATATAAT
TGCGAAATCGCTAGAGCTAGAAGTAATAATGAAGCATTTAAGAAAGGATACTGTTTGCTC
CAGATTTTCTAACAGTATGTTGCAATGTCTTGGCCCTCTCTTTGTTAAGTTCACAAGCAA
TAATACTCCCTTCTCCATTCATAAGTGCAGCAAGGTGGACTGTTTTGTTCCCTGGAGCCG
CACATGCATCAATAACCTAAGTTTAATGTTCAACTGGAAATTAATGATCTGACATGATAC
AAGTCTTAAGTATGTAACGTAACACAAACCAGAGTGATACTTATCAACTGCTCAGAATGC
AACATTCTTCCCATAATCACGAGTCATGAAGAATAGTAAATAAGCATAGACTTTCATTTG
CAAACTTTAAAAATGATATACAAATTGTTAAGTGATACTCCCTCTGTAAACTAATATAAG
AGCGTTTAGATTACTATAAAGTAGTGATCTAAATGCTCTTATATTAGTTTACGGAGGGAG
TACATATCAGGATTACTATAATTTACACTGACGGCATCCCTCAAAACTTTTCTTTCCAAG
AAAACTCCGCGTCACCACAATTTTACGTGCAGTACTAAGGTCCAGAATATAGTTGTGTAA
AATCCTATCAATTAAGAAAGATGGTAATGTAACTAAAAATAAATACTTCACTCAGCTCAA
ATGGTTGCAACTCGCAAGATAACAATAAATATACGCAACAAGAACTAGTGCGATCAAATA
TACTACACTAACTGTTATGACCGGTACAACGTACCAACGGAGGAGGCCCAATGGGCAGGG
TTAATTACGGGCTTAGCCCAAGTTATCTTACCTATCTTAGANNNNNNNNTATATTAGAGT
CCAAGTTAGAGTCCAAGTTACCTAGGGTTTA